RNA–Protein interactions for RNA: ENST00000510488.1

KRT18P35-201, Transcript of keratin 18 pseudogene 35, humanhuman

BASIC

Gene KRT18P35, Length 1,269 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P35-201ENST00000510488 NISCHQ9Y2I1 1504 aa47.66■■■■■ 5.22
KRT18P35-201ENST00000510488 ABCC9O60706 1549 aa43.49■■■■■ 4.55
KRT18P35-201ENST00000510488 CCDC180Q9P1Z9 1646 aa42.97■■■■■ 4.47
KRT18P35-201ENST00000510488 DNAJC5BQ9UF47 199 aa41.27■■■■■ 4.2
KRT18P35-201ENST00000510488 RB1CC1Q8TDY2 1594 aa41.13■■■■■ 4.18
KRT18P35-201ENST00000510488 NACADO15069 1562 aa40.74■■■■■ 4.11
KRT18P35-201ENST00000510488 DCAF8L2P0C7V8 631 aa40.43■■■■■ 4.06
KRT18P35-201ENST00000510488 PABPN1Q86U42 306 aaKnown RBP eCLIP40.41■■■■■ 4.06
KRT18P35-201ENST00000510488 UNC13AQ9UPW8 1703 aa40.29■■■■■ 4.04
KRT18P35-201ENST00000510488 BICRAQ9NZM4 1560 aa40.01■■■■■ 4
KRT18P35-201ENST00000510488 MYO15BQ96JP2 1530 aa39.98■■■■□ 3.99
KRT18P35-201ENST00000510488 ZCCHC6Q5VYS8 1495 aaKnown RBP39.39■■■■□ 3.9
KRT18P35-201ENST00000510488 SHROOM4Q9ULL8 1493 aa39.33■■■■□ 3.89
KRT18P35-201ENST00000510488 DCAF1Q9Y4B6 1507 aa39.3■■■■□ 3.88
KRT18P35-201ENST00000510488 CC2D2AQ9P2K1 1620 aa39.26■■■■□ 3.88
KRT18P35-201ENST00000510488 CECR2Q9BXF3 1484 aa39.21■■■■□ 3.87
KRT18P35-201ENST00000510488 SCRIBQ14160 1630 aa39.17■■■■□ 3.86
KRT18P35-201ENST00000510488 EIF4G1Q04637 1599 aaKnown RBP39.04■■■■□ 3.84
KRT18P35-201ENST00000510488 DNAJC5Q9H3Z4 198 aa38.2■■■■□ 3.71
KRT18P35-201ENST00000510488 CUX2O14529 1486 aa37.64■■■■□ 3.62
KRT18P35-201ENST00000510488 NCAPD3P42695 1498 aa37.61■■■■□ 3.61
KRT18P35-201ENST00000510488 ERCC6Q03468 1493 aa37.55■■■■□ 3.6
KRT18P35-201ENST00000510488 ATAD2BQ9ULI0 1458 aa37.45■■■■□ 3.59
KRT18P35-201ENST00000510488 SMARCA4P51532 1647 aa37.29■■■■□ 3.56
KRT18P35-201ENST00000510488 HMGXB3Q12766 1538 aa37.29■■■■□ 3.56
KRT18P35-201ENST00000510488 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
KRT18P35-201ENST00000510488 NESP48681 1621 aa37.24■■■■□ 3.55
KRT18P35-201ENST00000510488 BAZ1BQ9UIG0 1483 aaKnown RBP37.05■■■■□ 3.52
KRT18P35-201ENST00000510488 BAZ1AQ9NRL2 1556 aaPredicted RBP37■■■■□ 3.51
KRT18P35-201ENST00000510488 THOC2Q8NI27 1593 aaKnown RBP36.95■■■■□ 3.51
KRT18P35-201ENST00000510488 PEG3Q9GZU2 1588 aa36.91■■■■□ 3.5
KRT18P35-201ENST00000510488 LAMC3Q9Y6N6 1575 aa36.85■■■■□ 3.49
KRT18P35-201ENST00000510488 MROH2BQ7Z745 1585 aa36.74■■■■□ 3.47
KRT18P35-201ENST00000510488 KIF21AQ7Z4S6 1674 aa36.74■■■■□ 3.47
KRT18P35-201ENST00000510488 PDS5BQ9NTI5 1447 aa36.63■■■■□ 3.45
KRT18P35-201ENST00000510488 CADPSQ9ULU8 1353 aa36.44■■■■□ 3.42
KRT18P35-201ENST00000510488 MRC2Q9UBG0 1479 aa36.37■■■■□ 3.41
KRT18P35-201ENST00000510488 TRIM41Q8WV44 630 aa36.34■■■■□ 3.41
KRT18P35-201ENST00000510488 WDR62O43379 1518 aa36.31■■■■□ 3.4
KRT18P35-201ENST00000510488 WIZO95785 1651 aa36.29■■■■□ 3.4
KRT18P35-201ENST00000510488 CEP164Q9UPV0 1460 aa36.12■■■■□ 3.37
KRT18P35-201ENST00000510488 FANCD2Q9BXW9 1451 aa36.05■■■■□ 3.36
KRT18P35-201ENST00000510488 CFTRP13569 1480 aa35.93■■■■□ 3.34
KRT18P35-201ENST00000510488 OSCARQ8IYS5 282 aa35.83■■■■□ 3.33
KRT18P35-201ENST00000510488 URB2Q14146 1524 aaKnown RBP35.81■■■■□ 3.32
KRT18P35-201ENST00000510488 RSF1Q96T23 1441 aaPredicted RBP35.78■■■■□ 3.32
KRT18P35-201ENST00000510488 TOP2AP11388 1531 aaKnown RBP35.76■■■■□ 3.31
KRT18P35-201ENST00000510488 PRDM2Q13029 1718 aa35.57■■■■□ 3.28
KRT18P35-201ENST00000510488 RIMBP3CA6NJZ7 1639 aa35.48■■■■□ 3.27
KRT18P35-201ENST00000510488 RIMBP3BA6NNM3 1639 aa35.48■■■■□ 3.27
KRT18P35-201ENST00000510488 RIMBP3Q9UFD9 1639 aa35.48■■■■□ 3.27
KRT18P35-201ENST00000510488 ZNF608Q9ULD9 1512 aaPredicted RBP35.46■■■■□ 3.27
KRT18P35-201ENST00000510488 IFT140Q96RY7 1462 aa35.41■■■■□ 3.26
KRT18P35-201ENST00000510488 CCDC88BA6NC98 1476 aa35.37■■■■□ 3.25
KRT18P35-201ENST00000510488 TOPBP1Q92547 1522 aa35.32■■■■□ 3.25
KRT18P35-201ENST00000510488 ARHGEF11O15085 1522 aa35.3■■■■□ 3.24
KRT18P35-201ENST00000510488 EIF4G3O43432 1585 aaKnown RBP35.22■■■■□ 3.23
KRT18P35-201ENST00000510488 ABCC8Q09428 1581 aa35.15■■■■□ 3.22
KRT18P35-201ENST00000510488 DNMBPQ6XZF7 1577 aa35.14■■■■□ 3.22
KRT18P35-201ENST00000510488 CHD1O14646 1710 aa35.08■■■■□ 3.21
KRT18P35-201ENST00000510488 TARBP1Q13395 1621 aaKnown RBP35.06■■■■□ 3.2
KRT18P35-201ENST00000510488 CYB5RLQ6IPT4 315 aa35.06■■■■□ 3.2
KRT18P35-201ENST00000510488 AQRO60306 1485 aaKnown RBP eCLIP35.05■■■■□ 3.2
KRT18P35-201ENST00000510488 ARAP1Q96P48 1450 aa34.94■■■■□ 3.18
KRT18P35-201ENST00000510488 POLA1P09884 1462 aaPredicted RBP34.93■■■■□ 3.18
KRT18P35-201ENST00000510488 FBLN2P98095 1184 aa34.9■■■■□ 3.18
KRT18P35-201ENST00000510488 RAD54L2Q9Y4B4 1467 aa34.83■■■■□ 3.17
KRT18P35-201ENST00000510488 TRHP20396 242 aaPredicted RBP34.82■■■■□ 3.16
KRT18P35-201ENST00000510488 TDRD9Q8NDG6 1382 aaKnown RBP34.76■■■■□ 3.16
KRT18P35-201ENST00000510488 SOGA1O94964 1423 aa34.74■■■■□ 3.15
KRT18P35-201ENST00000510488 SNAPC4Q5SXM2 1469 aa34.68■■■■□ 3.14
KRT18P35-201ENST00000510488 CLASP1Q7Z460 1538 aa34.65■■■■□ 3.14
KRT18P35-201ENST00000510488 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
KRT18P35-201ENST00000510488 WDR97A6NE52 1622 aa34.61■■■■□ 3.13
KRT18P35-201ENST00000510488 CUX1P39880 1505 aa34.55■■■■□ 3.12
KRT18P35-201ENST00000510488 SYNJ1O43426 1573 aa34.54■■■■□ 3.12
KRT18P35-201ENST00000510488 CHMP7Q8WUX9 453 aaPredicted RBP34.54■■■■□ 3.12
KRT18P35-201ENST00000510488 MAGI1Q96QZ7 1491 aaPredicted RBP34.53■■■■□ 3.12
KRT18P35-201ENST00000510488 GRIN2BQ13224 1484 aa34.49■■■■□ 3.11
KRT18P35-201ENST00000510488 SYNJ2O15056 1496 aa34.44■■■■□ 3.1
KRT18P35-201ENST00000510488 PBRM1Q86U86 1689 aa34.37■■■■□ 3.09
KRT18P35-201ENST00000510488 GAPVD1Q14C86 1478 aa34.32■■■■□ 3.08
KRT18P35-201ENST00000510488 ABCA5Q8WWZ7 1642 aa34.22■■■■□ 3.07
KRT18P35-201ENST00000510488 ABCA10Q8WWZ4 1543 aa34.2■■■■□ 3.07
KRT18P35-201ENST00000510488 AEBP2Q6ZN18 517 aaPredicted RBP34.14■■■■□ 3.06
KRT18P35-201ENST00000510488 ERCC6L2Q5T890 1561 aa34.11■■■■□ 3.05
KRT18P35-201ENST00000510488 GRIN2AQ12879 1464 aa34.07■■■■□ 3.04
KRT18P35-201ENST00000510488 ADAMTS12P58397 1594 aa34■■■■□ 3.03
KRT18P35-201ENST00000510488 CEP170Q5SW79 1584 aa34■■■■□ 3.03
KRT18P35-201ENST00000510488 NUP160Q12769 1436 aa33.97■■■■□ 3.03
KRT18P35-201ENST00000510488 WRNQ14191 1432 aaPredicted RBP eCLIP33.95■■■■□ 3.02
KRT18P35-201ENST00000510488 SHROOM2Q13796 1616 aa33.89■■■■□ 3.02
KRT18P35-201ENST00000510488 BIVM-ERCC5R4GMW8 1640 aa33.86■■■■□ 3.01
KRT18P35-201ENST00000510488 FHAD1B1AJZ9 1412 aa33.85■■■■□ 3.01
KRT18P35-201ENST00000510488 TOP2BQ02880 1626 aa33.83■■■■□ 3.01
KRT18P35-201ENST00000510488 SUPT5HO00267 1087 aaKnown RBP33.82■■■■□ 3
KRT18P35-201ENST00000510488 ERICH3Q5RHP9 1530 aa33.76■■■■□ 3
KRT18P35-201ENST00000510488 KIF13AQ9H1H9 1805 aa33.74■■■□□ 2.99
KRT18P35-201ENST00000510488 PRG4Q92954 1404 aaPredicted RBP33.68■■■□□ 2.98
KRT18P35-201ENST00000510488 JPH4Q96JJ6 628 aa33.61■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms