Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V0A1Q93050 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP6V0A1Q93050 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ATP6V0A1Q93050 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC18.52■□□□□ 0.55
ATP6V0A1Q93050 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
ATP6V0A1Q93050 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.52■□□□□ 0.55
ATP6V0A1Q93050 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 AC105233.2-201ENST00000523697 349 ntBASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 AC069120.2-201ENST00000524091 540 ntBASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 AF228730.5-201ENST00000530288 346 ntBASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 AC020765.3-201ENST00000613051 740 ntBASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 LTB4R2-202ENST00000528054 3092 ntBASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ATP6V0A1Q93050 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 TSPY16P-201ENST00000449843 468 ntBASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 PRYP6-201ENST00000514804 343 ntBASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 QPRT-203ENST00000562473 579 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 AL158211.3-201ENST00000607385 239 ntBASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 AL031731.1-201ENST00000642131 2094 ntBASIC18.5■□□□□ 0.55
ATP6V0A1Q93050 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.49■□□□□ 0.55
ATP6V0A1Q93050 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ATP6V0A1Q93050 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
ATP6V0A1Q93050 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A1Q93050 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ATP6V0A1Q93050 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms