RNA–Protein interactions for RNA: ENST00000339560.9

PODNL1-202, Transcript of podocan like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PODNL1, Length 2,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PODNL1-202ENST00000339560 NISCHQ9Y2I1 1504 aa37.09■■■■□ 3.53
PODNL1-202ENST00000339560 CCDC180Q9P1Z9 1646 aa31.93■■■□□ 2.7
PODNL1-202ENST00000339560 ZCCHC6Q5VYS8 1495 aaKnown RBP31.24■■■□□ 2.59
PODNL1-202ENST00000339560 SHROOM4Q9ULL8 1493 aa30.88■■■□□ 2.53
PODNL1-202ENST00000339560 DCAF8L2P0C7V8 631 aa30.75■■■□□ 2.51
PODNL1-202ENST00000339560 DCAF1Q9Y4B6 1507 aa30.54■■■□□ 2.48
PODNL1-202ENST00000339560 ABCC9O60706 1549 aa30.07■■■□□ 2.4
PODNL1-202ENST00000339560 SUPT5HO00267 1087 aaKnown RBP29.97■■■□□ 2.39
PODNL1-202ENST00000339560 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
PODNL1-202ENST00000339560 NACADO15069 1562 aa29.69■■■□□ 2.34
PODNL1-202ENST00000339560 SCRIBQ14160 1630 aa29.66■■■□□ 2.34
PODNL1-202ENST00000339560 RB1CC1Q8TDY2 1594 aa29.33■■■□□ 2.29
PODNL1-202ENST00000339560 RSF1Q96T23 1441 aaPredicted RBP29.04■■■□□ 2.24
PODNL1-202ENST00000339560 CECR2Q9BXF3 1484 aa28.9■■■□□ 2.22
PODNL1-202ENST00000339560 CHIC1Q5VXU3 224 aa28.88■■■□□ 2.21
PODNL1-202ENST00000339560 UNC13AQ9UPW8 1703 aa28.78■■■□□ 2.2
PODNL1-202ENST00000339560 MROH2BQ7Z745 1585 aa28.75■■■□□ 2.19
PODNL1-202ENST00000339560 BAZ1AQ9NRL2 1556 aaPredicted RBP28.56■■■□□ 2.16
PODNL1-202ENST00000339560 WIZO95785 1651 aa28.53■■■□□ 2.16
PODNL1-202ENST00000339560 PABPN1Q86U42 306 aaKnown RBP eCLIP28.52■■■□□ 2.16
PODNL1-202ENST00000339560 BICRAQ9NZM4 1560 aa28.52■■■□□ 2.16
PODNL1-202ENST00000339560 SMARCA4P51532 1647 aa28.38■■■□□ 2.13
PODNL1-202ENST00000339560 HRCP23327 699 aa28.37■■■□□ 2.13
PODNL1-202ENST00000339560 TOP2AP11388 1531 aaKnown RBP28.16■■■□□ 2.1
PODNL1-202ENST00000339560 TRIM41Q8WV44 630 aa28.05■■■□□ 2.08
PODNL1-202ENST00000339560 CCDC88BA6NC98 1476 aa27.98■■■□□ 2.07
PODNL1-202ENST00000339560 SMARCA2P51531 1590 aa27.95■■■□□ 2.07
PODNL1-202ENST00000339560 PEG3Q9GZU2 1588 aa27.94■■■□□ 2.06
PODNL1-202ENST00000339560 LOC105371045A0A1W2PR82 267 aa27.91■■■□□ 2.06
PODNL1-202ENST00000339560 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.06
PODNL1-202ENST00000339560 ATAD2BQ9ULI0 1458 aa27.83■■■□□ 2.05
PODNL1-202ENST00000339560 PCGF6Q9BYE7 350 aa27.76■■■□□ 2.03
PODNL1-202ENST00000339560 BAZ1BQ9UIG0 1483 aaKnown RBP27.7■■■□□ 2.03
PODNL1-202ENST00000339560 FAM9AQ8IZU1 332 aaPredicted RBP27.69■■■□□ 2.02
PODNL1-202ENST00000339560 ABCC8Q09428 1581 aa27.6■■■□□ 2.01
PODNL1-202ENST00000339560 PELP1Q8IZL8 1130 aaKnown RBP27.55■■■□□ 2
PODNL1-202ENST00000339560 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
PODNL1-202ENST00000339560 NCAPD3P42695 1498 aa27.46■■□□□ 1.99
PODNL1-202ENST00000339560 HMGXB3Q12766 1538 aa27.41■■□□□ 1.98
PODNL1-202ENST00000339560 EHMT2Q96KQ7 1210 aa27.38■■□□□ 1.97
PODNL1-202ENST00000339560 WRNQ14191 1432 aaPredicted RBP eCLIP27.3■■□□□ 1.96
PODNL1-202ENST00000339560 SOGA1O94964 1423 aa27.22■■□□□ 1.95
PODNL1-202ENST00000339560 TRIM26Q12899 539 aaPredicted RBP27.21■■□□□ 1.95
PODNL1-202ENST00000339560 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
PODNL1-202ENST00000339560 CC2D2AQ9P2K1 1620 aa27.13■■□□□ 1.93
PODNL1-202ENST00000339560 RUSC2Q8N2Y8 1516 aa27.11■■□□□ 1.93
PODNL1-202ENST00000339560 EEA1Q15075 1411 aa27.08■■□□□ 1.93
PODNL1-202ENST00000339560 CSRNP3Q8WYN3 585 aa27.04■■□□□ 1.92
PODNL1-202ENST00000339560 CFTRP13569 1480 aa27.02■■□□□ 1.92
PODNL1-202ENST00000339560 ZEB1P37275 1124 aaPredicted RBP27.01■■□□□ 1.91
PODNL1-202ENST00000339560 DNAJC5BQ9UF47 199 aa26.98■■□□□ 1.91
PODNL1-202ENST00000339560 TOP2BQ02880 1626 aa26.94■■□□□ 1.9
PODNL1-202ENST00000339560 BIVM-ERCC5R4GMW8 1640 aa26.87■■□□□ 1.89
PODNL1-202ENST00000339560 CADPSQ9ULU8 1353 aa26.85■■□□□ 1.89
PODNL1-202ENST00000339560 TNIKQ9UKE5 1360 aa26.84■■□□□ 1.89
PODNL1-202ENST00000339560 CUX1P39880 1505 aa26.82■■□□□ 1.88
PODNL1-202ENST00000339560 UBTFP17480 764 aaKnown RBP26.8■■□□□ 1.88
PODNL1-202ENST00000339560 GOLGA3Q08378 1498 aa26.8■■□□□ 1.88
PODNL1-202ENST00000339560 CEP162Q5TB80 1403 aa26.77■■□□□ 1.88
PODNL1-202ENST00000339560 PRDM2Q13029 1718 aa26.74■■□□□ 1.87
PODNL1-202ENST00000339560 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
PODNL1-202ENST00000339560 KIF21BO75037 1637 aa26.7■■□□□ 1.87
PODNL1-202ENST00000339560 MYT1Q01538 1121 aa26.65■■□□□ 1.86
PODNL1-202ENST00000339560 RAPGEF2Q9Y4G8 1499 aa26.6■■□□□ 1.85
PODNL1-202ENST00000339560 FANCD2Q9BXW9 1451 aa26.56■■□□□ 1.84
PODNL1-202ENST00000339560 KIF27Q86VH2 1401 aa26.54■■□□□ 1.84
PODNL1-202ENST00000339560 NESP48681 1621 aa26.54■■□□□ 1.84
PODNL1-202ENST00000339560 SCAF1Q9H7N4 1312 aaKnown RBP26.51■■□□□ 1.83
PODNL1-202ENST00000339560 PRXQ9BXM0 1461 aa26.5■■□□□ 1.83
PODNL1-202ENST00000339560 FGD5Q6ZNL6 1462 aa26.46■■□□□ 1.83
PODNL1-202ENST00000339560 CLIP1P30622 1438 aa26.44■■□□□ 1.82
PODNL1-202ENST00000339560 ERICH3Q5RHP9 1530 aa26.43■■□□□ 1.82
PODNL1-202ENST00000339560 CUX2O14529 1486 aa26.41■■□□□ 1.82
PODNL1-202ENST00000339560 LAMC3Q9Y6N6 1575 aa26.39■■□□□ 1.82
PODNL1-202ENST00000339560 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
PODNL1-202ENST00000339560 DNMBPQ6XZF7 1577 aa26.34■■□□□ 1.81
PODNL1-202ENST00000339560 TOPBP1Q92547 1522 aa26.32■■□□□ 1.8
PODNL1-202ENST00000339560 TTBK1Q5TCY1 1321 aaPredicted RBP26.31■■□□□ 1.8
PODNL1-202ENST00000339560 IGF1RP08069 1367 aa26.31■■□□□ 1.8
PODNL1-202ENST00000339560 VPS8Q8N3P4 1428 aa26.25■■□□□ 1.79
PODNL1-202ENST00000339560 POLA1P09884 1462 aaPredicted RBP26.24■■□□□ 1.79
PODNL1-202ENST00000339560 RAD54L2Q9Y4B4 1467 aa26.24■■□□□ 1.79
PODNL1-202ENST00000339560 PDS5BQ9NTI5 1447 aa26.24■■□□□ 1.79
PODNL1-202ENST00000339560 URB2Q14146 1524 aaKnown RBP26.21■■□□□ 1.79
PODNL1-202ENST00000339560 CARMIL1Q5VZK9 1371 aa26.18■■□□□ 1.78
PODNL1-202ENST00000339560 ABCA10Q8WWZ4 1543 aa26.17■■□□□ 1.78
PODNL1-202ENST00000339560 ARAP1Q96P48 1450 aa26.11■■□□□ 1.77
PODNL1-202ENST00000339560 KIF21AQ7Z4S6 1674 aa26.09■■□□□ 1.77
PODNL1-202ENST00000339560 ACIN1Q9UKV3 1341 aaKnown RBP26.08■■□□□ 1.77
PODNL1-202ENST00000339560 APLP2Q06481 763 aa26.06■■□□□ 1.76
PODNL1-202ENST00000339560 ARHGAP35Q9NRY4 1499 aa26.02■■□□□ 1.76
PODNL1-202ENST00000339560 WDR97A6NE52 1622 aa25.98■■□□□ 1.75
PODNL1-202ENST00000339560 TDRD9Q8NDG6 1382 aaKnown RBP25.97■■□□□ 1.75
PODNL1-202ENST00000339560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.96■■□□□ 1.75
PODNL1-202ENST00000339560 NEUROD1Q13562 356 aa25.92■■□□□ 1.74
PODNL1-202ENST00000339560 CUL7Q14999 1698 aa25.9■■□□□ 1.74
PODNL1-202ENST00000339560 CCER1Q8TC90 406 aaPredicted RBP25.9■■□□□ 1.74
PODNL1-202ENST00000339560 ABCA5Q8WWZ7 1642 aa25.89■■□□□ 1.74
PODNL1-202ENST00000339560 GAPVD1Q14C86 1478 aa25.88■■□□□ 1.73
PODNL1-202ENST00000339560 MRC2Q9UBG0 1479 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms