Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTCD2Q8WV60 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTCD2Q8WV60 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PTCD2Q8WV60 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
PTCD2Q8WV60 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PTCD2Q8WV60 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.29
PTCD2Q8WV60 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.83■□□□□ 0.28
PTCD2Q8WV60 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 RHOQP3-201ENST00000437982 621 ntBASIC16.83■□□□□ 0.28
PTCD2Q8WV60 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.83■□□□□ 0.28
PTCD2Q8WV60 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 AC002347.1-201ENST00000569543 541 ntBASIC16.83■□□□□ 0.28
PTCD2Q8WV60 ALOX12P2-203ENST00000570921 1945 ntBASIC16.83■□□□□ 0.28
PTCD2Q8WV60 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 DOC2GP-204ENST00000639052 2548 ntBASIC16.83■□□□□ 0.28
PTCD2Q8WV60 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.83■□□□□ 0.28
PTCD2Q8WV60 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 AL671710.1-201ENST00000610245 2349 ntBASIC16.82■□□□□ 0.28
PTCD2Q8WV60 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 AL031731.1-201ENST00000642131 2094 ntBASIC16.82■□□□□ 0.28
PTCD2Q8WV60 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 GGT4P-201ENST00000623672 1708 ntBASIC16.82■□□□□ 0.28
PTCD2Q8WV60 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 BCAR1-209ENST00000546196 1340 ntBASIC16.82■□□□□ 0.28
PTCD2Q8WV60 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 MIR1233-2-201ENST00000408138 82 ntBASIC16.82■□□□□ 0.28
PTCD2Q8WV60 MIR1233-1-201ENST00000408722 82 ntBASIC16.82■□□□□ 0.28
PTCD2Q8WV60 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.82■□□□□ 0.28
PTCD2Q8WV60 UPF3AP3-201ENST00000420996 769 ntBASIC16.82■□□□□ 0.28
PTCD2Q8WV60 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PTCD2Q8WV60 ALG1L5P-201ENST00000482043 771 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms