RNA–Protein interactions for RNA: ENST00000394620.1

CCL8-201, Transcript of C-C motif chemokine ligand 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL8, Length 1,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL8-201ENST00000394620 AEBP2Q6ZN18 517 aaPredicted RBP40.03■■■■■ 4
CCL8-201ENST00000394620 CHIC1Q5VXU3 224 aa37.81■■■■□ 3.64
CCL8-201ENST00000394620 SENP3Q9H4L4 574 aaPredicted RBP34.24■■■■□ 3.07
CCL8-201ENST00000394620 PHF23Q9BUL5 403 aaPredicted RBP33.72■■■□□ 2.99
CCL8-201ENST00000394620 FOXD1Q16676 465 aa31.9■■■□□ 2.7
CCL8-201ENST00000394620 PLPPR3Q6T4P5 718 aa30.11■■■□□ 2.41
CCL8-201ENST00000394620 MSH5O43196 834 aa30■■■□□ 2.39
CCL8-201ENST00000394620 PIAS4Q8N2W9 510 aaPredicted RBP29.73■■■□□ 2.35
CCL8-201ENST00000394620 POTEDQ86YR6 584 aa29.66■■■□□ 2.34
CCL8-201ENST00000394620 PPP6R1Q9UPN7 881 aa29.62■■■□□ 2.33
CCL8-201ENST00000394620 ADRA2BP18089 450 aa29.5■■■□□ 2.31
CCL8-201ENST00000394620 MAPK8IP2Q13387 824 aaPredicted RBP27.16■■□□□ 1.94
CCL8-201ENST00000394620 DMRT2Q9Y5R5 561 aa27.11■■□□□ 1.93
CCL8-201ENST00000394620 SCAF1Q9H7N4 1312 aaKnown RBP27.06■■□□□ 1.92
CCL8-201ENST00000394620 PPP4R3CPQ6ZMV5 832 aa26.34■■□□□ 1.81
CCL8-201ENST00000394620 HOXD11P31277 338 aaPredicted RBP26.04■■□□□ 1.76
CCL8-201ENST00000394620 CNKSR2Q8WXI2 1034 aa25.93■■□□□ 1.74
CCL8-201ENST00000394620 DCAF8L1A6NGE4 600 aa25.91■■□□□ 1.74
CCL8-201ENST00000394620 CACNB1Q02641 598 aaPredicted RBP25.84■■□□□ 1.73
CCL8-201ENST00000394620 RNF216Q9NWF9 866 aaPredicted RBP25.77■■□□□ 1.72
CCL8-201ENST00000394620 RNF39Q9H2S5 420 aa25.56■■□□□ 1.68
CCL8-201ENST00000394620 NCBP3Q53F19 620 aaKnown RBP25.28■■□□□ 1.64
CCL8-201ENST00000394620 DNAJC5BQ9UF47 199 aa25.27■■□□□ 1.64
CCL8-201ENST00000394620 C1QBPQ07021 282 aaKnown RBP25.2■■□□□ 1.62
CCL8-201ENST00000394620 NPM3O75607 178 aaKnown RBP24.88■■□□□ 1.57
CCL8-201ENST00000394620 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.74■■□□□ 1.55
CCL8-201ENST00000394620 U3KPZ7 1027 aaPredicted RBP24.21■■□□□ 1.47
CCL8-201ENST00000394620 KCNA4P22459 653 aa24.15■■□□□ 1.46
CCL8-201ENST00000394620 SPINK5Q9NQ38 1064 aaPredicted RBP23.91■■□□□ 1.42
CCL8-201ENST00000394620 CAPN15O75808 1086 aa23.87■■□□□ 1.41
CCL8-201ENST00000394620 DSG3P32926 999 aa23.84■■□□□ 1.41
CCL8-201ENST00000394620 SLC4A2P04920 1241 aa23.82■■□□□ 1.4
CCL8-201ENST00000394620 APLP2Q06481 763 aa23.57■■□□□ 1.36
CCL8-201ENST00000394620 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.49■■□□□ 1.35
CCL8-201ENST00000394620 HNRNPUL2Q1KMD3 747 aaKnown RBP23.49■■□□□ 1.35
CCL8-201ENST00000394620 ZNF219Q9P2Y4 722 aaPredicted RBP23.44■■□□□ 1.34
CCL8-201ENST00000394620 TRHP20396 242 aaPredicted RBP23.42■■□□□ 1.34
CCL8-201ENST00000394620 SAMD1Q6SPF0 538 aaPredicted RBP23.32■■□□□ 1.32
CCL8-201ENST00000394620 ABCB7O75027 752 aa23.27■■□□□ 1.32
CCL8-201ENST00000394620 POTEHQ6S545 545 aa23.2■■□□□ 1.3
CCL8-201ENST00000394620 MYCNP04198 464 aaPredicted RBP23.04■■□□□ 1.28
CCL8-201ENST00000394620 RBM42Q9BTD8 480 aaKnown RBP22.79■■□□□ 1.24
CCL8-201ENST00000394620 POLA2Q14181 598 aa22.76■■□□□ 1.23
CCL8-201ENST00000394620 SLC4A1APQ9BWU0 796 aaKnown RBP22.76■■□□□ 1.23
CCL8-201ENST00000394620 FOXD4L1Q9NU39 408 aa22.65■■□□□ 1.22
CCL8-201ENST00000394620 ATF5Q9Y2D1 282 aaPredicted RBP22.47■■□□□ 1.19
CCL8-201ENST00000394620 ZBTB12Q9Y330 459 aaPredicted RBP22.35■■□□□ 1.17
CCL8-201ENST00000394620 CHRDL2Q6WN34 429 aa22.34■■□□□ 1.17
CCL8-201ENST00000394620 AKT1S1Q96B36 256 aa22.21■■□□□ 1.15
CCL8-201ENST00000394620 ZBTB22O15209 634 aa22.2■■□□□ 1.14
CCL8-201ENST00000394620 ATXN8OSP0DMR3 200 aa22.04■■□□□ 1.12
CCL8-201ENST00000394620 OSCARQ8IYS5 282 aa22.03■■□□□ 1.12
CCL8-201ENST00000394620 REM2Q8IYK8 340 aaPredicted RBP21.97■■□□□ 1.11
CCL8-201ENST00000394620 PIP4P2Q8N4L2 257 aa21.77■■□□□ 1.08
CCL8-201ENST00000394620 PITPNM1O00562 1244 aa21.72■■□□□ 1.07
CCL8-201ENST00000394620 FBLN2P98095 1184 aa21.65■■□□□ 1.06
CCL8-201ENST00000394620 SP7Q8TDD2 431 aaPredicted RBP21.64■■□□□ 1.05
CCL8-201ENST00000394620 FXR2P51116 673 aaKnown RBP eCLIP21.63■■□□□ 1.05
CCL8-201ENST00000394620 SPDYE2BA6NHP3 402 aa21.62■■□□□ 1.05
CCL8-201ENST00000394620 SPDYE6P0CI01 402 aa21.62■■□□□ 1.05
CCL8-201ENST00000394620 SPDYE2Q495Y8 402 aa21.62■■□□□ 1.05
CCL8-201ENST00000394620 MKRN4PQ13434 485 aaPredicted RBP21.45■■□□□ 1.02
CCL8-201ENST00000394620 HAX1O00165 279 aa21.4■■□□□ 1.02
CCL8-201ENST00000394620 SSUH2Q9Y2M2 353 aa21.31■■□□□ 1
CCL8-201ENST00000394620 SPDYE1Q8NFV5 336 aaPredicted RBP21.29■■□□□ 1
CCL8-201ENST00000394620 ZNF692Q9BU19 519 aaPredicted RBP21.28■■□□□ 1
CCL8-201ENST00000394620 CLEC11AQ9Y240 323 aa21.21■□□□□ 0.99
CCL8-201ENST00000394620 PRKAR2AP13861 404 aaKnown RBP21.16■□□□□ 0.98
CCL8-201ENST00000394620 EVX2Q03828 476 aa21.12■□□□□ 0.97
CCL8-201ENST00000394620 CSRNP3Q8WYN3 585 aa20.96■□□□□ 0.95
CCL8-201ENST00000394620 PABPN1Q86U42 306 aaKnown RBP eCLIP20.95■□□□□ 0.94
CCL8-201ENST00000394620 C19orf67A6NJJ6 358 aa20.94■□□□□ 0.94
CCL8-201ENST00000394620 PRR29P0C7W0 189 aa20.86■□□□□ 0.93
CCL8-201ENST00000394620 CHADLQ6NUI6 762 aa20.83■□□□□ 0.93
CCL8-201ENST00000394620 GABBR2O75899 941 aa20.67■□□□□ 0.9
CCL8-201ENST00000394620 FARP1Q9Y4F1 1045 aaPredicted RBP20.54■□□□□ 0.88
CCL8-201ENST00000394620 EHMT2Q96KQ7 1210 aa20.48■□□□□ 0.87
CCL8-201ENST00000394620 CD44P16070 742 aaKnown RBP20.46■□□□□ 0.87
CCL8-201ENST00000394620 STAG3Q9UJ98 1225 aa20.39■□□□□ 0.85
CCL8-201ENST00000394620 CLCN6P51797 869 aa20.35■□□□□ 0.85
CCL8-201ENST00000394620 SPDYE4A6NLX3 237 aa20.31■□□□□ 0.84
CCL8-201ENST00000394620 CREBZFQ9NS37 354 aa20.29■□□□□ 0.84
CCL8-201ENST00000394620 LHX8Q68G74 356 aa20.28■□□□□ 0.84
CCL8-201ENST00000394620 POTEIP0CG38 1075 aa20.22■□□□□ 0.83
CCL8-201ENST00000394620 ZNF579Q8NAF0 562 aaKnown RBP20.18■□□□□ 0.82
CCL8-201ENST00000394620 ZRANB1Q9UGI0 708 aa20.13■□□□□ 0.81
CCL8-201ENST00000394620 DCBLD2Q96PD2 775 aa20.04■□□□□ 0.8
CCL8-201ENST00000394620 PAK3O75914 559 aaPredicted RBP19.94■□□□□ 0.78
CCL8-201ENST00000394620 MNX1P50219 401 aaPredicted RBP19.94■□□□□ 0.78
CCL8-201ENST00000394620 NPM1P06748 294 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCL8-201ENST00000394620 GALR2O43603 387 aaPredicted RBP19.9■□□□□ 0.78
CCL8-201ENST00000394620 PROM2Q8N271 834 aa19.84■□□□□ 0.77
CCL8-201ENST00000394620 PHF12Q96QT6 1004 aa19.81■□□□□ 0.76
CCL8-201ENST00000394620 MS4A3Q96HJ5 214 aa19.56■□□□□ 0.72
CCL8-201ENST00000394620 POTEB2H3BUK9 544 aa19.54■□□□□ 0.72
CCL8-201ENST00000394620 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
CCL8-201ENST00000394620 OTUD5Q96G74 571 aa19.53■□□□□ 0.72
CCL8-201ENST00000394620 ASTLQ6HA08 431 aaPredicted RBP19.52■□□□□ 0.72
CCL8-201ENST00000394620 TSPYL2Q9H2G4 693 aaPredicted RBP19.5■□□□□ 0.71
CCL8-201ENST00000394620 CCDC61Q9Y6R9 512 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms