Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 AL603756.1-201ENST00000606511 2163 ntBASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 GPS2P2-201ENST00000430745 888 ntBASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 FAM86GP-201ENST00000448322 971 ntBASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SCN4BQ8IWT1 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 NKG7-205ENST00000600427 520 ntTSL 3 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.48■□□□□ 0.39
SCN4BQ8IWT1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AL512652.2-201ENST00000625156 1716 ntBASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 MIR346-201ENST00000362234 95 ntBASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.47■□□□□ 0.39
SCN4BQ8IWT1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms