Protein–RNA interactions for Protein: B3KS81

SRRM5, Serine/arginine repetitive matrix protein 5, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM5B3KS81 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 ME2P1-201ENST00000426028 1970 ntBASIC13.97□□□□□ -0.17
SRRM5B3KS81 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 AC002056.1-201ENST00000395613 760 ntBASIC13.97□□□□□ -0.17
SRRM5B3KS81 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 PCGF3-213ENST00000620529 1899 ntBASIC13.97□□□□□ -0.17
SRRM5B3KS81 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 AC092919.2-201ENST00000623631 1645 ntBASIC13.97□□□□□ -0.17
SRRM5B3KS81 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
SRRM5B3KS81 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
SRRM5B3KS81 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 AC099398.1-201ENST00000567919 2776 ntBASIC13.96□□□□□ -0.17
SRRM5B3KS81 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 MCCD1P2-201ENST00000423228 335 ntBASIC13.96□□□□□ -0.17
SRRM5B3KS81 AC092474.2-201ENST00000424288 719 ntBASIC13.96□□□□□ -0.17
SRRM5B3KS81 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 AC112191.1-201ENST00000523689 701 ntBASIC13.96□□□□□ -0.17
SRRM5B3KS81 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 AP002472.1-201ENST00000577490 586 ntBASIC13.96□□□□□ -0.17
SRRM5B3KS81 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 AP001160.2-201ENST00000596071 487 ntBASIC13.96□□□□□ -0.17
SRRM5B3KS81 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 AL161645.1-201ENST00000622716 1255 ntBASIC13.96□□□□□ -0.17
SRRM5B3KS81 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.96□□□□□ -0.17
SRRM5B3KS81 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
SRRM5B3KS81 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SRRM5B3KS81 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
SRRM5B3KS81 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC13.96□□□□□ -0.18
SRRM5B3KS81 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
SRRM5B3KS81 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.96□□□□□ -0.18
SRRM5B3KS81 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SRRM5B3KS81 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.18
SRRM5B3KS81 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SRRM5B3KS81 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
SRRM5B3KS81 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.96□□□□□ -0.18
SRRM5B3KS81 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
SRRM5B3KS81 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms