Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.79□□□□□ -0.04
RTTNQ86VV8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTTNQ86VV8 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 KRT18P2-201ENST00000447938 1258 ntBASIC14.78□□□□□ -0.04
RTTNQ86VV8 DUX4L17-201ENST00000557360 1267 ntBASIC14.78□□□□□ -0.04
RTTNQ86VV8 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 AC129492.6-201ENST00000611383 1305 ntBASIC14.78□□□□□ -0.04
RTTNQ86VV8 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 AC078925.2-201ENST00000624013 1973 ntBASIC14.78□□□□□ -0.04
RTTNQ86VV8 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 UNC93B6-202ENST00000528242 690 ntBASIC14.78□□□□□ -0.04
RTTNQ86VV8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.78□□□□□ -0.04
RTTNQ86VV8 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTTNQ86VV8 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTTNQ86VV8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTTNQ86VV8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RTTNQ86VV8 AC108751.1-201ENST00000490852 363 ntBASIC14.77□□□□□ -0.04
RTTNQ86VV8 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 AC040169.1-201ENST00000565382 521 ntBASIC14.77□□□□□ -0.04
RTTNQ86VV8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
RTTNQ86VV8 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTTNQ86VV8 AC002310.6-201ENST00000624451 1377 ntBASIC14.77□□□□□ -0.04
RTTNQ86VV8 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RTTNQ86VV8 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RTTNQ86VV8 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RTTNQ86VV8 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms