Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.4■□□□□ 0.38
TCF4P15884 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.4■□□□□ 0.38
TCF4P15884 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.4■□□□□ 0.38
TCF4P15884 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC17.4■□□□□ 0.38
TCF4P15884 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.4■□□□□ 0.38
TCF4P15884 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 GPAA1P2-202ENST00000606848 1787 ntBASIC17.4■□□□□ 0.38
TCF4P15884 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
TCF4P15884 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.4■□□□□ 0.38
TCF4P15884 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.4■□□□□ 0.38
TCF4P15884 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCF4P15884 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TCF4P15884 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TCF4P15884 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
TCF4P15884 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TCF4P15884 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
TCF4P15884 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.39■□□□□ 0.37
TCF4P15884 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.39■□□□□ 0.37
TCF4P15884 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.39■□□□□ 0.37
TCF4P15884 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TCF4P15884 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.39■□□□□ 0.37
TCF4P15884 CXCL1P1-201ENST00000502804 216 ntBASIC17.39■□□□□ 0.37
TCF4P15884 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.39■□□□□ 0.37
TCF4P15884 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.39■□□□□ 0.37
TCF4P15884 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
TCF4P15884 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC17.39■□□□□ 0.37
TCF4P15884 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.39■□□□□ 0.37
TCF4P15884 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.39■□□□□ 0.37
TCF4P15884 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 CICP6-201ENST00000457191 2729 ntBASIC17.39■□□□□ 0.37
TCF4P15884 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
TCF4P15884 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TCF4P15884 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.39■□□□□ 0.37
TCF4P15884 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.39■□□□□ 0.37
TCF4P15884 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TCF4P15884 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.38■□□□□ 0.37
TCF4P15884 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.38■□□□□ 0.37
TCF4P15884 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.38■□□□□ 0.37
TCF4P15884 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.38■□□□□ 0.37
TCF4P15884 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.38■□□□□ 0.37
TCF4P15884 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.38■□□□□ 0.37
TCF4P15884 HMGA1P7-201ENST00000406908 502 ntBASIC17.38■□□□□ 0.37
TCF4P15884 HCG4-201ENST00000418983 998 ntBASIC17.38■□□□□ 0.37
TCF4P15884 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.38■□□□□ 0.37
TCF4P15884 TPM4P1-201ENST00000436100 807 ntBASIC17.38■□□□□ 0.37
TCF4P15884 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.38■□□□□ 0.37
TCF4P15884 PRSS29P-201ENST00000440800 595 ntBASIC17.38■□□□□ 0.37
TCF4P15884 VN2R19P-201ENST00000442399 1052 ntBASIC17.38■□□□□ 0.37
TCF4P15884 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.38■□□□□ 0.37
TCF4P15884 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.38■□□□□ 0.37
TCF4P15884 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.38■□□□□ 0.37
TCF4P15884 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.38■□□□□ 0.37
TCF4P15884 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC17.38■□□□□ 0.37
TCF4P15884 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.38■□□□□ 0.37
TCF4P15884 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.38■□□□□ 0.37
TCF4P15884 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.38■□□□□ 0.37
TCF4P15884 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.38■□□□□ 0.37
TCF4P15884 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.38■□□□□ 0.37
TCF4P15884 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TCF4P15884 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.38■□□□□ 0.37
TCF4P15884 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms