RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 DCAF8L2P0C7V8 631 aa28.85■■■□□ 2.21
ITGB4-201ENST00000200181 PELP1Q8IZL8 1130 aaKnown RBP27.9■■■□□ 2.06
ITGB4-201ENST00000200181 SUPT5HO00267 1087 aaKnown RBP27.56■■■□□ 2
ITGB4-201ENST00000200181 EHMT2Q96KQ7 1210 aa27.1■■□□□ 1.93
ITGB4-201ENST00000200181 ERICH6Q7L0X2 663 aa26.85■■□□□ 1.89
ITGB4-201ENST00000200181 APLP2Q06481 763 aa26.8■■□□□ 1.88
ITGB4-201ENST00000200181 SHROOM4Q9ULL8 1493 aa26.69■■□□□ 1.86
ITGB4-201ENST00000200181 CCER1Q8TC90 406 aaPredicted RBP26.63■■□□□ 1.85
ITGB4-201ENST00000200181 CENPBP07199 599 aaPredicted RBP26.48■■□□□ 1.83
ITGB4-201ENST00000200181 TTBK1Q5TCY1 1321 aaPredicted RBP26.3■■□□□ 1.8
ITGB4-201ENST00000200181 PCGF6Q9BYE7 350 aa26.25■■□□□ 1.79
ITGB4-201ENST00000200181 MYT1Q01538 1121 aa26.24■■□□□ 1.79
ITGB4-201ENST00000200181 FAM9AQ8IZU1 332 aaPredicted RBP26.23■■□□□ 1.79
ITGB4-201ENST00000200181 ZEB1P37275 1124 aaPredicted RBP26.07■■□□□ 1.76
ITGB4-201ENST00000200181 NEFLP07196 543 aa26.01■■□□□ 1.75
ITGB4-201ENST00000200181 YTHDC1Q96MU7 727 aaKnown RBP25.86■■□□□ 1.73
ITGB4-201ENST00000200181 RANGAP1P46060 587 aaPredicted RBP25.79■■□□□ 1.72
ITGB4-201ENST00000200181 NISCHQ9Y2I1 1504 aa25.75■■□□□ 1.71
ITGB4-201ENST00000200181 ATP1B4Q9UN42 357 aaPredicted RBP25.67■■□□□ 1.7
ITGB4-201ENST00000200181 DAXXQ9UER7 740 aaPredicted RBP25.5■■□□□ 1.67
ITGB4-201ENST00000200181 TRIM41Q8WV44 630 aa25.45■■□□□ 1.66
ITGB4-201ENST00000200181 UBTFP17480 764 aaKnown RBP25.35■■□□□ 1.65
ITGB4-201ENST00000200181 PPARGC1BQ86YN6 1023 aaKnown RBP25.02■■□□□ 1.6
ITGB4-201ENST00000200181 POLR3GLQ9BT43 218 aa25.01■■□□□ 1.59
ITGB4-201ENST00000200181 RTL5Q5HYW3 569 aaPredicted RBP24.94■■□□□ 1.58
ITGB4-201ENST00000200181 TRIM26Q12899 539 aaPredicted RBP24.91■■□□□ 1.58
ITGB4-201ENST00000200181 ZNF316A6NFI3 1004 aaPredicted RBP24.87■■□□□ 1.57
ITGB4-201ENST00000200181 HRCP23327 699 aa24.87■■□□□ 1.57
ITGB4-201ENST00000200181 ITGAEP38570 1179 aa24.77■■□□□ 1.56
ITGB4-201ENST00000200181 MYT1LQ9UL68 1186 aa24.77■■□□□ 1.56
ITGB4-201ENST00000200181 CNGB1Q14028 1251 aaPredicted RBP24.76■■□□□ 1.55
ITGB4-201ENST00000200181 CLSPNQ9HAW4 1339 aa24.72■■□□□ 1.55
ITGB4-201ENST00000200181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.6■■□□□ 1.53
ITGB4-201ENST00000200181 HNRNPUL2Q1KMD3 747 aaKnown RBP24.6■■□□□ 1.53
ITGB4-201ENST00000200181 SLC4A1APQ9BWU0 796 aaKnown RBP24.55■■□□□ 1.52
ITGB4-201ENST00000200181 DIEXFQ68CQ4 756 aaKnown RBP24.38■■□□□ 1.49
ITGB4-201ENST00000200181 CHIC1Q5VXU3 224 aa24.38■■□□□ 1.49
ITGB4-201ENST00000200181 BCANQ96GW7 911 aa24.33■■□□□ 1.49
ITGB4-201ENST00000200181 LOC105371045A0A1W2PR82 267 aa24.2■■□□□ 1.47
ITGB4-201ENST00000200181 GTF3C3Q9Y5Q9 886 aa24.2■■□□□ 1.46
ITGB4-201ENST00000200181 CDK11AQ9UQ88 783 aaPredicted RBP24.19■■□□□ 1.46
ITGB4-201ENST00000200181 ZBTB47Q9UFB7 747 aaPredicted RBP24.17■■□□□ 1.46
ITGB4-201ENST00000200181 FAM50AQ14320 339 aaKnown RBP24.01■■□□□ 1.43
ITGB4-201ENST00000200181 TRIM52Q96A61 297 aa24.01■■□□□ 1.43
ITGB4-201ENST00000200181 ANP32CO43423 234 aa23.99■■□□□ 1.43
ITGB4-201ENST00000200181 NEUROD1Q13562 356 aa23.97■■□□□ 1.43
ITGB4-201ENST00000200181 EIF5BO60841 1220 aaKnown RBP23.97■■□□□ 1.43
ITGB4-201ENST00000200181 CANXP27824 592 aaKnown RBP23.93■■□□□ 1.42
ITGB4-201ENST00000200181 BCL11AQ9H165 835 aa23.89■■□□□ 1.42
ITGB4-201ENST00000200181 ANP32AP39687 249 aaKnown RBP23.87■■□□□ 1.41
ITGB4-201ENST00000200181 ZNF326Q5BKZ1 582 aaKnown RBP23.83■■□□□ 1.41
ITGB4-201ENST00000200181 SLC24A1O60721 1099 aa23.8■■□□□ 1.4
ITGB4-201ENST00000200181 NPM2Q86SE8 214 aaKnown RBP23.74■■□□□ 1.39
ITGB4-201ENST00000200181 ANP32BQ92688 251 aaKnown RBP23.73■■□□□ 1.39
ITGB4-201ENST00000200181 NEFMP07197 916 aa23.69■■□□□ 1.38
ITGB4-201ENST00000200181 GLIPR1L2Q4G1C9 344 aa23.64■■□□□ 1.38
ITGB4-201ENST00000200181 ACIN1Q9UKV3 1341 aaKnown RBP23.63■■□□□ 1.37
ITGB4-201ENST00000200181 HSP90AA1P07900 732 aaKnown RBP23.54■■□□□ 1.36
ITGB4-201ENST00000200181 UPF2Q9HAU5 1272 aaKnown RBP23.43■■□□□ 1.34
ITGB4-201ENST00000200181 FKBP8Q14318 412 aa23.39■■□□□ 1.33
ITGB4-201ENST00000200181 NBR1Q14596 966 aa23.37■■□□□ 1.33
ITGB4-201ENST00000200181 ARXQ96QS3 562 aa23.31■■□□□ 1.32
ITGB4-201ENST00000200181 HNRNPUQ00839 825 aaKnown RBP eCLIP23.18■■□□□ 1.3
ITGB4-201ENST00000200181 FBLN2P98095 1184 aa23.14■■□□□ 1.29
ITGB4-201ENST00000200181 FAM9BQ8IZU0 186 aa23.11■■□□□ 1.29
ITGB4-201ENST00000200181 CCDC136Q96JN2 1154 aa23.11■■□□□ 1.29
ITGB4-201ENST00000200181 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.09■■□□□ 1.29
ITGB4-201ENST00000200181 ARID3CA6NKF2 412 aa23.07■■□□□ 1.28
ITGB4-201ENST00000200181 ZNF777Q9ULD5 760 aaPredicted RBP23.06■■□□□ 1.28
ITGB4-201ENST00000200181 SALL2Q9Y467 1007 aaPredicted RBP23.05■■□□□ 1.28
ITGB4-201ENST00000200181 CDK11BP21127 795 aaKnown RBP23.04■■□□□ 1.28
ITGB4-201ENST00000200181 TONSLQ96HA7 1378 aa23.03■■□□□ 1.28
ITGB4-201ENST00000200181 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
ITGB4-201ENST00000200181 DDX10Q13206 875 aaKnown RBP22.97■■□□□ 1.27
ITGB4-201ENST00000200181 CHGAP10645 457 aaKnown RBP22.94■■□□□ 1.26
ITGB4-201ENST00000200181 TMC1Q8TDI8 760 aa22.92■■□□□ 1.26
ITGB4-201ENST00000200181 ESF1Q9H501 851 aaKnown RBP22.92■■□□□ 1.26
ITGB4-201ENST00000200181 STAG3Q9UJ98 1225 aa22.91■■□□□ 1.26
ITGB4-201ENST00000200181 TRIM44Q96DX7 344 aaPredicted RBP22.9■■□□□ 1.26
ITGB4-201ENST00000200181 WDR43Q15061 677 aaKnown RBP eCLIP22.89■■□□□ 1.26
ITGB4-201ENST00000200181 MYH16Q9H6N6 1097 aa22.86■■□□□ 1.25
ITGB4-201ENST00000200181 TNNT2P45379 298 aaPredicted RBP22.86■■□□□ 1.25
ITGB4-201ENST00000200181 NCLP19338 710 aaKnown RBP22.85■■□□□ 1.25
ITGB4-201ENST00000200181 IRX6P78412 446 aaPredicted RBP22.84■■□□□ 1.25
ITGB4-201ENST00000200181 PABPN1Q86U42 306 aaKnown RBP eCLIP22.83■■□□□ 1.25
ITGB4-201ENST00000200181 DDRGK1Q96HY6 314 aa22.83■■□□□ 1.25
ITGB4-201ENST00000200181 SCAF1Q9H7N4 1312 aaKnown RBP22.82■■□□□ 1.24
ITGB4-201ENST00000200181 BECN1Q14457 450 aa22.82■■□□□ 1.24
ITGB4-201ENST00000200181 ANP32EQ9BTT0 268 aa22.8■■□□□ 1.24
ITGB4-201ENST00000200181 MRS2Q9HD23 443 aa22.79■■□□□ 1.24
ITGB4-201ENST00000200181 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
ITGB4-201ENST00000200181 GOLGA6L22H0YM25 854 aa22.76■■□□□ 1.23
ITGB4-201ENST00000200181 PTMAP06454 111 aaKnown RBP22.71■■□□□ 1.23
ITGB4-201ENST00000200181 PLPPR3Q6T4P5 718 aa22.69■■□□□ 1.22
ITGB4-201ENST00000200181 RTN4Q9NQC3 1192 aaKnown RBP22.66■■□□□ 1.22
ITGB4-201ENST00000200181 DNTTIP2Q5QJE6 756 aaKnown RBP22.66■■□□□ 1.22
ITGB4-201ENST00000200181 ZRSR1Q15695 479 aaKnown RBP22.64■■□□□ 1.21
ITGB4-201ENST00000200181 NAP1L5Q96NT1 182 aaPredicted RBP22.63■■□□□ 1.21
ITGB4-201ENST00000200181 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.6■■□□□ 1.21
ITGB4-201ENST00000200181 ERICH6BQ5W0A0 696 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms