Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA1Q9UND3 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA1Q9UND3 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPIPA1Q9UND3 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.96■■□□□ 1.11
NPIPA1Q9UND3 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPIPA1Q9UND3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
NPIPA1Q9UND3 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
NPIPA1Q9UND3 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.96■■□□□ 1.11
NPIPA1Q9UND3 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.96■■□□□ 1.11
NPIPA1Q9UND3 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
NPIPA1Q9UND3 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.96■■□□□ 1.11
NPIPA1Q9UND3 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPIPA1Q9UND3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPIPA1Q9UND3 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NPIPA1Q9UND3 AC103724.3-201ENST00000564481 992 ntBASIC21.95■■□□□ 1.1
NPIPA1Q9UND3 AL031848.2-201ENST00000607670 837 ntBASIC21.95■■□□□ 1.1
NPIPA1Q9UND3 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NPIPA1Q9UND3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPIPA1Q9UND3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
NPIPA1Q9UND3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
NPIPA1Q9UND3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA1Q9UND3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA1Q9UND3 RPS2P7-201ENST00000447334 885 ntBASIC21.94■■□□□ 1.1
NPIPA1Q9UND3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA1Q9UND3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC21.94■■□□□ 1.1
NPIPA1Q9UND3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA1Q9UND3 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
NPIPA1Q9UND3 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.94■■□□□ 1.1
NPIPA1Q9UND3 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPA1Q9UND3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPA1Q9UND3 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPA1Q9UND3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPA1Q9UND3 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
NPIPA1Q9UND3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 AC019171.1-201ENST00000601251 1056 ntBASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
NPIPA1Q9UND3 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC21.91■■□□□ 1.1
NPIPA1Q9UND3 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.91■■□□□ 1.1
NPIPA1Q9UND3 AC091060.1-201ENST00000623524 1766 ntBASIC21.91■■□□□ 1.1
NPIPA1Q9UND3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA1Q9UND3 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA1Q9UND3 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA1Q9UND3 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
NPIPA1Q9UND3 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA1Q9UND3 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
NPIPA1Q9UND3 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA1Q9UND3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.9■■□□□ 1.1
NPIPA1Q9UND3 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
NPIPA1Q9UND3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
NPIPA1Q9UND3 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.1
NPIPA1Q9UND3 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
NPIPA1Q9UND3 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.88■■□□□ 1.09
NPIPA1Q9UND3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPA1Q9UND3 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.87■■□□□ 1.09
NPIPA1Q9UND3 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPA1Q9UND3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPA1Q9UND3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPA1Q9UND3 LONRF2P2-201ENST00000439212 571 ntBASIC21.87■■□□□ 1.09
NPIPA1Q9UND3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NPIPA1Q9UND3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.87■■□□□ 1.09
NPIPA1Q9UND3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC21.87■■□□□ 1.09
NPIPA1Q9UND3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.87■■□□□ 1.09
NPIPA1Q9UND3 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPA1Q9UND3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPA1Q9UND3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPA1Q9UND3 AC092803.2-201ENST00000564287 1899 ntBASIC21.86■■□□□ 1.09
NPIPA1Q9UND3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NPIPA1Q9UND3 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms