Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRAV12-1A0A0B4J245 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC16.75■□□□□ 0.27
TRAV12-1A0A0B4J245 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-1A0A0B4J245 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-1A0A0B4J245 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-1A0A0B4J245 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-1A0A0B4J245 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TRAV12-1A0A0B4J245 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
TRAV12-1A0A0B4J245 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-1A0A0B4J245 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
TRAV12-1A0A0B4J245 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-1A0A0B4J245 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-1A0A0B4J245 EI24-212ENST00000615917 1407 ntTSL 2 BASIC16.73■□□□□ 0.27
TRAV12-1A0A0B4J245 EBPL-202ENST00000378268 680 ntTSL 3 BASIC16.73■□□□□ 0.27
TRAV12-1A0A0B4J245 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TRAV12-1A0A0B4J245 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-1A0A0B4J245 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TRAV12-1A0A0B4J245 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TRAV12-1A0A0B4J245 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.72■□□□□ 0.27
TRAV12-1A0A0B4J245 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV12-1A0A0B4J245 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC16.72■□□□□ 0.27
TRAV12-1A0A0B4J245 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV12-1A0A0B4J245 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV12-1A0A0B4J245 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TRAV12-1A0A0B4J245 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV12-1A0A0B4J245 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-1A0A0B4J245 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC16.71■□□□□ 0.27
TRAV12-1A0A0B4J245 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-1A0A0B4J245 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRAV12-1A0A0B4J245 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
TRAV12-1A0A0B4J245 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC16.71■□□□□ 0.27
TRAV12-1A0A0B4J245 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV12-1A0A0B4J245 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV12-1A0A0B4J245 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV12-1A0A0B4J245 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRAV12-1A0A0B4J245 AL117328.2-201ENST00000624617 1940 ntBASIC16.7■□□□□ 0.26
TRAV12-1A0A0B4J245 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV12-1A0A0B4J245 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-1A0A0B4J245 CCDC136-202ENST00000378685 1689 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
TRAV12-1A0A0B4J245 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV12-1A0A0B4J245 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC16.7■□□□□ 0.26
TRAV12-1A0A0B4J245 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRAV12-1A0A0B4J245 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRAV12-1A0A0B4J245 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.7■□□□□ 0.26
TRAV12-1A0A0B4J245 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 CAMK1D-203ENST00000615792 1725 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 ADAMTSL5-202ENST00000395467 1533 ntTSL 5 BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRAV12-1A0A0B4J245 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV12-1A0A0B4J245 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV12-1A0A0B4J245 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV12-1A0A0B4J245 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV12-1A0A0B4J245 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV12-1A0A0B4J245 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV12-1A0A0B4J245 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms