Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.98■□□□□ 0.15
ITCHQ96J02 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.98■□□□□ 0.15
ITCHQ96J02 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.98■□□□□ 0.15
ITCHQ96J02 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.98■□□□□ 0.15
ITCHQ96J02 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.98■□□□□ 0.15
ITCHQ96J02 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.98■□□□□ 0.15
ITCHQ96J02 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
ITCHQ96J02 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ITCHQ96J02 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.98■□□□□ 0.15
ITCHQ96J02 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC15.98■□□□□ 0.15
ITCHQ96J02 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.98■□□□□ 0.15
ITCHQ96J02 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ITCHQ96J02 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC15.98■□□□□ 0.15
ITCHQ96J02 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
ITCHQ96J02 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.98■□□□□ 0.15
ITCHQ96J02 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.98■□□□□ 0.15
ITCHQ96J02 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.98■□□□□ 0.15
ITCHQ96J02 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
ITCHQ96J02 AL591684.3-201ENST00000605187 298 ntBASIC15.98■□□□□ 0.15
ITCHQ96J02 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
ITCHQ96J02 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC15.98■□□□□ 0.15
ITCHQ96J02 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
ITCHQ96J02 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
ITCHQ96J02 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
ITCHQ96J02 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
ITCHQ96J02 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.97■□□□□ 0.15
ITCHQ96J02 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ITCHQ96J02 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
ITCHQ96J02 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.97■□□□□ 0.15
ITCHQ96J02 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.97■□□□□ 0.15
ITCHQ96J02 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.97■□□□□ 0.15
ITCHQ96J02 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.97■□□□□ 0.15
ITCHQ96J02 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 NCF1C-201ENST00000438382 1427 ntBASIC15.97■□□□□ 0.15
ITCHQ96J02 AP005117.1-201ENST00000584346 1413 ntBASIC15.97■□□□□ 0.15
ITCHQ96J02 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.97■□□□□ 0.15
ITCHQ96J02 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.97■□□□□ 0.15
ITCHQ96J02 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ITCHQ96J02 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
ITCHQ96J02 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.97■□□□□ 0.15
ITCHQ96J02 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 ISCU-203ENST00000431221 799 ntTSL 2 BASIC15.97■□□□□ 0.15
ITCHQ96J02 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
ITCHQ96J02 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.97■□□□□ 0.15
ITCHQ96J02 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.97■□□□□ 0.15
ITCHQ96J02 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 TOP3BP1-201ENST00000420768 1380 ntBASIC15.97■□□□□ 0.15
ITCHQ96J02 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.97■□□□□ 0.15
ITCHQ96J02 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.97■□□□□ 0.15
ITCHQ96J02 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
ITCHQ96J02 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
ITCHQ96J02 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ITCHQ96J02 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.96■□□□□ 0.15
ITCHQ96J02 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
ITCHQ96J02 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.96■□□□□ 0.15
ITCHQ96J02 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.96■□□□□ 0.15
ITCHQ96J02 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ITCHQ96J02 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.96■□□□□ 0.15
ITCHQ96J02 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ITCHQ96J02 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
ITCHQ96J02 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
ITCHQ96J02 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.96■□□□□ 0.15
ITCHQ96J02 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
ITCHQ96J02 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ITCHQ96J02 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ITCHQ96J02 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
ITCHQ96J02 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms