Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CLIC3O95833 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 SNORA78-201ENST00000459373 127 ntBASIC15.5■□□□□ 0.07
CLIC3O95833 ECEL1P2-202ENST00000465689 757 ntBASIC15.5■□□□□ 0.07
CLIC3O95833 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.5■□□□□ 0.07
CLIC3O95833 AC128688.1-201ENST00000487626 519 ntBASIC15.5■□□□□ 0.07
CLIC3O95833 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
CLIC3O95833 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC15.5■□□□□ 0.07
CLIC3O95833 AL512604.3-201ENST00000569583 964 ntBASIC15.5■□□□□ 0.07
CLIC3O95833 AC111152.3-201ENST00000569699 673 ntBASIC15.5■□□□□ 0.07
CLIC3O95833 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC15.5■□□□□ 0.07
CLIC3O95833 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CLIC3O95833 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.5■□□□□ 0.07
CLIC3O95833 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
CLIC3O95833 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
CLIC3O95833 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 CYP2D8P-201ENST00000433633 1490 ntBASIC15.5■□□□□ 0.07
CLIC3O95833 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.5■□□□□ 0.07
CLIC3O95833 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.5■□□□□ 0.07
CLIC3O95833 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
CLIC3O95833 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.5■□□□□ 0.07
CLIC3O95833 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CLIC3O95833 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
CLIC3O95833 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.49■□□□□ 0.07
CLIC3O95833 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
CLIC3O95833 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.49■□□□□ 0.07
CLIC3O95833 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
CLIC3O95833 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC15.49■□□□□ 0.07
CLIC3O95833 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.49■□□□□ 0.07
CLIC3O95833 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.49■□□□□ 0.07
CLIC3O95833 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.49■□□□□ 0.07
CLIC3O95833 MDFI-202ENST00000373050 809 ntTSL 2 BASIC15.49■□□□□ 0.07
CLIC3O95833 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.49■□□□□ 0.07
CLIC3O95833 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.49■□□□□ 0.07
CLIC3O95833 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CLIC3O95833 AP003733.1-201ENST00000491725 852 ntBASIC15.49■□□□□ 0.07
CLIC3O95833 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.49■□□□□ 0.07
CLIC3O95833 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.49■□□□□ 0.07
CLIC3O95833 AC073912.3-201ENST00000624414 853 ntBASIC15.49■□□□□ 0.07
CLIC3O95833 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
CLIC3O95833 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.49■□□□□ 0.07
CLIC3O95833 AC009336.1-201ENST00000608941 1553 ntBASIC15.49■□□□□ 0.07
CLIC3O95833 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CLIC3O95833 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.49■□□□□ 0.07
CLIC3O95833 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CLIC3O95833 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.48■□□□□ 0.07
CLIC3O95833 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CLIC3O95833 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
CLIC3O95833 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.48■□□□□ 0.07
CLIC3O95833 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.48■□□□□ 0.07
CLIC3O95833 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CLIC3O95833 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CLIC3O95833 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.48■□□□□ 0.07
CLIC3O95833 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.48■□□□□ 0.07
CLIC3O95833 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.48■□□□□ 0.07
CLIC3O95833 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
CLIC3O95833 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CLIC3O95833 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CLIC3O95833 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CLIC3O95833 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
CLIC3O95833 AP000523.1-201ENST00000398242 1049 ntBASIC15.48■□□□□ 0.07
CLIC3O95833 ECEL1P3-201ENST00000427961 737 ntBASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms