RNA–Protein interactions for RNA: ENST00000250823.4

VCY1B-201, Transcript of variable charge Y-linked 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCY1B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCY1B-201ENST00000250823 NISCHQ9Y2I1 1504 aa47.23■■■■■ 5.15
VCY1B-201ENST00000250823 CCDC180Q9P1Z9 1646 aa42.23■■■■■ 4.35
VCY1B-201ENST00000250823 ABCC9O60706 1549 aa41.67■■■■■ 4.26
VCY1B-201ENST00000250823 RB1CC1Q8TDY2 1594 aa39.98■■■■□ 3.99
VCY1B-201ENST00000250823 NACADO15069 1562 aa39.83■■■■□ 3.97
VCY1B-201ENST00000250823 DCAF8L2P0C7V8 631 aa39.61■■■■□ 3.93
VCY1B-201ENST00000250823 MYO15BQ96JP2 1530 aa39.5■■■■□ 3.91
VCY1B-201ENST00000250823 ZCCHC6Q5VYS8 1495 aaKnown RBP39.25■■■■□ 3.87
VCY1B-201ENST00000250823 DCAF1Q9Y4B6 1507 aa39.13■■■■□ 3.85
VCY1B-201ENST00000250823 UNC13AQ9UPW8 1703 aa38.91■■■■□ 3.82
VCY1B-201ENST00000250823 PABPN1Q86U42 306 aaKnown RBP eCLIP38.84■■■■□ 3.81
VCY1B-201ENST00000250823 BICRAQ9NZM4 1560 aa38.68■■■■□ 3.78
VCY1B-201ENST00000250823 DNAJC5BQ9UF47 199 aa38.58■■■■□ 3.77
VCY1B-201ENST00000250823 SHROOM4Q9ULL8 1493 aa38.43■■■■□ 3.74
VCY1B-201ENST00000250823 SCRIBQ14160 1630 aa38.41■■■■□ 3.74
VCY1B-201ENST00000250823 EIF4G1Q04637 1599 aaKnown RBP37.76■■■■□ 3.63
VCY1B-201ENST00000250823 CC2D2AQ9P2K1 1620 aa37.69■■■■□ 3.62
VCY1B-201ENST00000250823 CECR2Q9BXF3 1484 aa37.54■■■■□ 3.6
VCY1B-201ENST00000250823 NCAPD3P42695 1498 aa36.75■■■■□ 3.47
VCY1B-201ENST00000250823 SMARCA4P51532 1647 aa36.73■■■■□ 3.47
VCY1B-201ENST00000250823 BAZ1AQ9NRL2 1556 aaPredicted RBP36.68■■■■□ 3.46
VCY1B-201ENST00000250823 ATAD2BQ9ULI0 1458 aa36.66■■■■□ 3.46
VCY1B-201ENST00000250823 SMARCA2P51531 1590 aa36.65■■■■□ 3.46
VCY1B-201ENST00000250823 HMGXB3Q12766 1538 aa36.54■■■■□ 3.44
VCY1B-201ENST00000250823 PEG3Q9GZU2 1588 aa36.42■■■■□ 3.42
VCY1B-201ENST00000250823 BAZ1BQ9UIG0 1483 aaKnown RBP36.37■■■■□ 3.41
VCY1B-201ENST00000250823 MROH2BQ7Z745 1585 aa36.34■■■■□ 3.41
VCY1B-201ENST00000250823 ERCC6Q03468 1493 aa36.03■■■■□ 3.36
VCY1B-201ENST00000250823 WIZO95785 1651 aa35.9■■■■□ 3.34
VCY1B-201ENST00000250823 NESP48681 1621 aa35.89■■■■□ 3.34
VCY1B-201ENST00000250823 LAMC3Q9Y6N6 1575 aa35.86■■■■□ 3.33
VCY1B-201ENST00000250823 CUX2O14529 1486 aa35.86■■■■□ 3.33
VCY1B-201ENST00000250823 RSF1Q96T23 1441 aaPredicted RBP35.79■■■■□ 3.32
VCY1B-201ENST00000250823 PDS5BQ9NTI5 1447 aa35.66■■■■□ 3.3
VCY1B-201ENST00000250823 CADPSQ9ULU8 1353 aa35.64■■■■□ 3.3
VCY1B-201ENST00000250823 TOP2AP11388 1531 aaKnown RBP35.57■■■■□ 3.29
VCY1B-201ENST00000250823 THOC2Q8NI27 1593 aaKnown RBP35.5■■■■□ 3.27
VCY1B-201ENST00000250823 KIF21AQ7Z4S6 1674 aa35.46■■■■□ 3.27
VCY1B-201ENST00000250823 CFTRP13569 1480 aa35.33■■■■□ 3.25
VCY1B-201ENST00000250823 MRC2Q9UBG0 1479 aa35.29■■■■□ 3.24
VCY1B-201ENST00000250823 CEP164Q9UPV0 1460 aa35.24■■■■□ 3.23
VCY1B-201ENST00000250823 DNAJC5Q9H3Z4 198 aa35.23■■■■□ 3.23
VCY1B-201ENST00000250823 FANCD2Q9BXW9 1451 aa35.22■■■■□ 3.23
VCY1B-201ENST00000250823 WDR62O43379 1518 aa35.16■■■■□ 3.22
VCY1B-201ENST00000250823 CCDC88BA6NC98 1476 aa35.12■■■■□ 3.21
VCY1B-201ENST00000250823 PRDM2Q13029 1718 aa34.98■■■■□ 3.19
VCY1B-201ENST00000250823 URB2Q14146 1524 aaKnown RBP34.85■■■■□ 3.17
VCY1B-201ENST00000250823 ABCC8Q09428 1581 aa34.66■■■■□ 3.14
VCY1B-201ENST00000250823 TOPBP1Q92547 1522 aa34.59■■■■□ 3.13
VCY1B-201ENST00000250823 IFT140Q96RY7 1462 aa34.54■■■■□ 3.12
VCY1B-201ENST00000250823 DNMBPQ6XZF7 1577 aa34.53■■■■□ 3.12
VCY1B-201ENST00000250823 SUPT5HO00267 1087 aaKnown RBP34.51■■■■□ 3.12
VCY1B-201ENST00000250823 ZNF608Q9ULD9 1512 aaPredicted RBP34.32■■■■□ 3.08
VCY1B-201ENST00000250823 OSCARQ8IYS5 282 aa34.27■■■■□ 3.08
VCY1B-201ENST00000250823 POLA1P09884 1462 aaPredicted RBP34.27■■■■□ 3.08
VCY1B-201ENST00000250823 TARBP1Q13395 1621 aaKnown RBP34.22■■■■□ 3.07
VCY1B-201ENST00000250823 EIF4G3O43432 1585 aaKnown RBP34.2■■■■□ 3.07
VCY1B-201ENST00000250823 SOGA1O94964 1423 aa34.13■■■■□ 3.05
VCY1B-201ENST00000250823 CUX1P39880 1505 aa34.12■■■■□ 3.05
VCY1B-201ENST00000250823 FGD5Q6ZNL6 1462 aa34.11■■■■□ 3.05
VCY1B-201ENST00000250823 AQRO60306 1485 aaKnown RBP eCLIP34.08■■■■□ 3.05
VCY1B-201ENST00000250823 RAD54L2Q9Y4B4 1467 aa34.07■■■■□ 3.05
VCY1B-201ENST00000250823 WDR97A6NE52 1622 aa34.05■■■■□ 3.04
VCY1B-201ENST00000250823 TDRD9Q8NDG6 1382 aaKnown RBP33.96■■■■□ 3.03
VCY1B-201ENST00000250823 TRIM41Q8WV44 630 aa33.83■■■■□ 3.01
VCY1B-201ENST00000250823 GRIN2BQ13224 1484 aa33.82■■■■□ 3
VCY1B-201ENST00000250823 CHD1O14646 1710 aa33.81■■■■□ 3
VCY1B-201ENST00000250823 WRNQ14191 1432 aaPredicted RBP eCLIP33.8■■■■□ 3
VCY1B-201ENST00000250823 FBLN2P98095 1184 aa33.8■■■■□ 3
VCY1B-201ENST00000250823 ABCA10Q8WWZ4 1543 aa33.79■■■■□ 3
VCY1B-201ENST00000250823 SNAPC4Q5SXM2 1469 aa33.79■■■■□ 3
VCY1B-201ENST00000250823 MAGI1Q96QZ7 1491 aaPredicted RBP33.79■■■■□ 3
VCY1B-201ENST00000250823 TOP2BQ02880 1626 aa33.75■■■□□ 2.99
VCY1B-201ENST00000250823 BIVM-ERCC5R4GMW8 1640 aa33.75■■■□□ 2.99
VCY1B-201ENST00000250823 GAPVD1Q14C86 1478 aa33.74■■■□□ 2.99
VCY1B-201ENST00000250823 RIMBP3CA6NJZ7 1639 aa33.68■■■□□ 2.98
VCY1B-201ENST00000250823 RIMBP3BA6NNM3 1639 aa33.68■■■□□ 2.98
VCY1B-201ENST00000250823 RIMBP3Q9UFD9 1639 aa33.68■■■□□ 2.98
VCY1B-201ENST00000250823 CHMP7Q8WUX9 453 aaPredicted RBP33.68■■■□□ 2.98
VCY1B-201ENST00000250823 ARHGEF11O15085 1522 aa33.66■■■□□ 2.98
VCY1B-201ENST00000250823 SYNJ1O43426 1573 aa33.66■■■□□ 2.98
VCY1B-201ENST00000250823 ABCA5Q8WWZ7 1642 aa33.66■■■□□ 2.98
VCY1B-201ENST00000250823 SYNJ2O15056 1496 aa33.65■■■□□ 2.98
VCY1B-201ENST00000250823 PBRM1Q86U86 1689 aa33.64■■■□□ 2.98
VCY1B-201ENST00000250823 CLASP1Q7Z460 1538 aa33.49■■■□□ 2.95
VCY1B-201ENST00000250823 ERICH3Q5RHP9 1530 aa33.4■■■□□ 2.94
VCY1B-201ENST00000250823 ADAMTS12P58397 1594 aa33.38■■■□□ 2.93
VCY1B-201ENST00000250823 CYB5RLQ6IPT4 315 aa33.37■■■□□ 2.93
VCY1B-201ENST00000250823 FHAD1B1AJZ9 1412 aa33.36■■■□□ 2.93
VCY1B-201ENST00000250823 GRIN2AQ12879 1464 aa33.36■■■□□ 2.93
VCY1B-201ENST00000250823 ARAP1Q96P48 1450 aa33.34■■■□□ 2.93
VCY1B-201ENST00000250823 NUP160Q12769 1436 aa33.24■■■□□ 2.91
VCY1B-201ENST00000250823 KIF27Q86VH2 1401 aa33.16■■■□□ 2.9
VCY1B-201ENST00000250823 CEP170Q5SW79 1584 aa33.16■■■□□ 2.9
VCY1B-201ENST00000250823 IGF1RP08069 1367 aa33.02■■■□□ 2.88
VCY1B-201ENST00000250823 SHROOM2Q13796 1616 aa33.01■■■□□ 2.87
VCY1B-201ENST00000250823 CUL7Q14999 1698 aa33.01■■■□□ 2.87
VCY1B-201ENST00000250823 ERCC6L2Q5T890 1561 aa32.91■■■□□ 2.86
VCY1B-201ENST00000250823 RUSC2Q8N2Y8 1516 aa32.9■■■□□ 2.86
VCY1B-201ENST00000250823 JPH4Q96JJ6 628 aa32.89■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms