Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 AC079781.3-201ENST00000449110 356 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 IGHV3-65-201ENST00000523210 341 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 AC012640.2-201ENST00000561606 901 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 RN7SL510P-201ENST00000581311 263 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 AL691432.3-201ENST00000621860 400 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 AC005593.1-201ENST00000624894 515 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.99■□□□□ 0.15
PCDH7O60245 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
PCDH7O60245 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PCDH7O60245 SLC22A20-204ENST00000530038 1673 ntBASIC15.99■□□□□ 0.15
PCDH7O60245 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH7O60245 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PCDH7O60245 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 AC129492.6-201ENST00000611383 1305 ntBASIC15.98■□□□□ 0.15
PCDH7O60245 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH7O60245 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PCDH7O60245 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
PCDH7O60245 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
PCDH7O60245 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PCDH7O60245 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
PCDH7O60245 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH7O60245 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.98■□□□□ 0.15
PCDH7O60245 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.98■□□□□ 0.15
PCDH7O60245 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.98■□□□□ 0.15
PCDH7O60245 AC148477.8-201ENST00000624298 468 ntBASIC15.98■□□□□ 0.15
PCDH7O60245 PGM5P2-202ENST00000637225 1043 ntBASIC15.98■□□□□ 0.15
PCDH7O60245 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 LINC02199-201ENST00000506655 2702 ntBASIC15.98■□□□□ 0.15
PCDH7O60245 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
PCDH7O60245 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH7O60245 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
PCDH7O60245 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH7O60245 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.98■□□□□ 0.15
PCDH7O60245 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PCDH7O60245 AC008741.2-201ENST00000612792 3115 ntBASIC15.98■□□□□ 0.15
PCDH7O60245 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PCDH7O60245 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDH7O60245 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
PCDH7O60245 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH7O60245 CYP2T1P-202ENST00000641596 2535 ntBASIC15.97■□□□□ 0.15
PCDH7O60245 ME2P1-201ENST00000426028 1970 ntBASIC15.97■□□□□ 0.15
PCDH7O60245 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
PCDH7O60245 KRT8P39-201ENST00000396270 1433 ntBASIC15.97■□□□□ 0.15
PCDH7O60245 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.97■□□□□ 0.15
PCDH7O60245 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 AL450487.1-201ENST00000426799 995 ntBASIC15.97■□□□□ 0.15
PCDH7O60245 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PCDH7O60245 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms