Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 ELL2P1-201ENST00000413990 1906 ntBASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 AC002056.1-201ENST00000395613 760 ntBASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 HCG4-201ENST00000418983 998 ntBASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 ACTG1P14-201ENST00000446382 1122 ntBASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 SNHG9-202ENST00000564014 471 ntBASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 AC091167.2-201ENST00000579581 588 ntBASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 AL596442.2-201ENST00000610240 980 ntBASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRIM48Q8IWZ4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 PP12613-201ENST00000424958 2230 ntBASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 YBX1P5-201ENST00000509441 847 ntBASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 AC046158.3-201ENST00000624947 2558 ntBASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 AC018695.7-201ENST00000624587 2492 ntBASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 AC092919.2-201ENST00000623631 1645 ntBASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRIM48Q8IWZ4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRIM48Q8IWZ4 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms