RNA–Protein interactions for RNA: ENST00000564014.1

SNHG9-202, Transcript of small nucleolar RNA host gene 9, humanhuman

BASIC

Gene SNHG9, Length 471 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-202ENST00000564014 NISCHQ9Y2I1 1504 aa41.39■■■■■ 4.22
SNHG9-202ENST00000564014 ABCC9O60706 1549 aa37.31■■■■□ 3.56
SNHG9-202ENST00000564014 CCDC180Q9P1Z9 1646 aa37.08■■■■□ 3.53
SNHG9-202ENST00000564014 RB1CC1Q8TDY2 1594 aa35.44■■■■□ 3.26
SNHG9-202ENST00000564014 DCAF8L2P0C7V8 631 aa35.26■■■■□ 3.24
SNHG9-202ENST00000564014 NACADO15069 1562 aa35.16■■■■□ 3.22
SNHG9-202ENST00000564014 DNAJC5BQ9UF47 199 aa35■■■■□ 3.19
SNHG9-202ENST00000564014 PABPN1Q86U42 306 aaKnown RBP eCLIP34.8■■■■□ 3.16
SNHG9-202ENST00000564014 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
SNHG9-202ENST00000564014 UNC13AQ9UPW8 1703 aa34.44■■■■□ 3.1
SNHG9-202ENST00000564014 BICRAQ9NZM4 1560 aa34.29■■■■□ 3.08
SNHG9-202ENST00000564014 ZCCHC6Q5VYS8 1495 aaKnown RBP34.27■■■■□ 3.08
SNHG9-202ENST00000564014 DCAF1Q9Y4B6 1507 aa34.14■■■■□ 3.06
SNHG9-202ENST00000564014 SHROOM4Q9ULL8 1493 aa33.89■■■■□ 3.02
SNHG9-202ENST00000564014 SCRIBQ14160 1630 aa33.88■■■■□ 3.01
SNHG9-202ENST00000564014 CC2D2AQ9P2K1 1620 aa33.61■■■□□ 2.97
SNHG9-202ENST00000564014 CECR2Q9BXF3 1484 aa33.61■■■□□ 2.97
SNHG9-202ENST00000564014 EIF4G1Q04637 1599 aaKnown RBP33.54■■■□□ 2.96
SNHG9-202ENST00000564014 NCAPD3P42695 1498 aa32.48■■■□□ 2.79
SNHG9-202ENST00000564014 ATAD2BQ9ULI0 1458 aa32.36■■■□□ 2.77
SNHG9-202ENST00000564014 ERCC6Q03468 1493 aa32.29■■■□□ 2.76
SNHG9-202ENST00000564014 SMARCA2P51531 1590 aa32.28■■■□□ 2.76
SNHG9-202ENST00000564014 SMARCA4P51532 1647 aa32.27■■■□□ 2.76
SNHG9-202ENST00000564014 DNAJC5Q9H3Z4 198 aa32.25■■■□□ 2.75
SNHG9-202ENST00000564014 HMGXB3Q12766 1538 aa32.18■■■□□ 2.74
SNHG9-202ENST00000564014 BAZ1AQ9NRL2 1556 aaPredicted RBP32.16■■■□□ 2.74
SNHG9-202ENST00000564014 CUX2O14529 1486 aa32.15■■■□□ 2.74
SNHG9-202ENST00000564014 BAZ1BQ9UIG0 1483 aaKnown RBP32.1■■■□□ 2.73
SNHG9-202ENST00000564014 NESP48681 1621 aa31.97■■■□□ 2.71
SNHG9-202ENST00000564014 PEG3Q9GZU2 1588 aa31.92■■■□□ 2.7
SNHG9-202ENST00000564014 MROH2BQ7Z745 1585 aa31.89■■■□□ 2.7
SNHG9-202ENST00000564014 LAMC3Q9Y6N6 1575 aa31.73■■■□□ 2.67
SNHG9-202ENST00000564014 PDS5BQ9NTI5 1447 aa31.66■■■□□ 2.66
SNHG9-202ENST00000564014 THOC2Q8NI27 1593 aaKnown RBP31.58■■■□□ 2.65
SNHG9-202ENST00000564014 CADPSQ9ULU8 1353 aa31.54■■■□□ 2.64
SNHG9-202ENST00000564014 WIZO95785 1651 aa31.48■■■□□ 2.63
SNHG9-202ENST00000564014 KIF21AQ7Z4S6 1674 aa31.48■■■□□ 2.63
SNHG9-202ENST00000564014 MRC2Q9UBG0 1479 aa31.33■■■□□ 2.61
SNHG9-202ENST00000564014 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
SNHG9-202ENST00000564014 CEP164Q9UPV0 1460 aa31.21■■■□□ 2.59
SNHG9-202ENST00000564014 WDR62O43379 1518 aa31.19■■■□□ 2.58
SNHG9-202ENST00000564014 FANCD2Q9BXW9 1451 aa31.17■■■□□ 2.58
SNHG9-202ENST00000564014 CFTRP13569 1480 aa31.12■■■□□ 2.57
SNHG9-202ENST00000564014 TOP2AP11388 1531 aaKnown RBP31.1■■■□□ 2.57
SNHG9-202ENST00000564014 TRIM41Q8WV44 630 aa30.94■■■□□ 2.54
SNHG9-202ENST00000564014 URB2Q14146 1524 aaKnown RBP30.85■■■□□ 2.53
SNHG9-202ENST00000564014 OSCARQ8IYS5 282 aa30.8■■■□□ 2.52
SNHG9-202ENST00000564014 CCDC88BA6NC98 1476 aa30.79■■■□□ 2.52
SNHG9-202ENST00000564014 PRDM2Q13029 1718 aa30.64■■■□□ 2.5
SNHG9-202ENST00000564014 IFT140Q96RY7 1462 aa30.59■■■□□ 2.49
SNHG9-202ENST00000564014 TOPBP1Q92547 1522 aa30.53■■■□□ 2.48
SNHG9-202ENST00000564014 ABCC8Q09428 1581 aa30.52■■■□□ 2.48
SNHG9-202ENST00000564014 ZNF608Q9ULD9 1512 aaPredicted RBP30.51■■■□□ 2.47
SNHG9-202ENST00000564014 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
SNHG9-202ENST00000564014 EIF4G3O43432 1585 aaKnown RBP30.29■■■□□ 2.44
SNHG9-202ENST00000564014 AQRO60306 1485 aaKnown RBP eCLIP30.27■■■□□ 2.44
SNHG9-202ENST00000564014 FBLN2P98095 1184 aa30.26■■■□□ 2.43
SNHG9-202ENST00000564014 RIMBP3CA6NJZ7 1639 aa30.22■■■□□ 2.43
SNHG9-202ENST00000564014 RIMBP3BA6NNM3 1639 aa30.22■■■□□ 2.43
SNHG9-202ENST00000564014 RIMBP3Q9UFD9 1639 aa30.22■■■□□ 2.43
SNHG9-202ENST00000564014 POLA1P09884 1462 aaPredicted RBP30.22■■■□□ 2.43
SNHG9-202ENST00000564014 TARBP1Q13395 1621 aaKnown RBP30.19■■■□□ 2.42
SNHG9-202ENST00000564014 ARHGEF11O15085 1522 aa30.17■■■□□ 2.42
SNHG9-202ENST00000564014 SOGA1O94964 1423 aa30.16■■■□□ 2.42
SNHG9-202ENST00000564014 RAD54L2Q9Y4B4 1467 aa30.14■■■□□ 2.42
SNHG9-202ENST00000564014 TDRD9Q8NDG6 1382 aaKnown RBP30.12■■■□□ 2.41
SNHG9-202ENST00000564014 CYB5RLQ6IPT4 315 aa30.1■■■□□ 2.41
SNHG9-202ENST00000564014 FGD5Q6ZNL6 1462 aa30.05■■■□□ 2.4
SNHG9-202ENST00000564014 CHD1O14646 1710 aa30.04■■■□□ 2.4
SNHG9-202ENST00000564014 SUPT5HO00267 1087 aaKnown RBP30.02■■■□□ 2.4
SNHG9-202ENST00000564014 CHMP7Q8WUX9 453 aaPredicted RBP29.99■■■□□ 2.39
SNHG9-202ENST00000564014 CUX1P39880 1505 aa29.96■■■□□ 2.39
SNHG9-202ENST00000564014 SNAPC4Q5SXM2 1469 aa29.94■■■□□ 2.38
SNHG9-202ENST00000564014 WDR97A6NE52 1622 aa29.91■■■□□ 2.38
SNHG9-202ENST00000564014 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
SNHG9-202ENST00000564014 TRHP20396 242 aaPredicted RBP29.86■■■□□ 2.37
SNHG9-202ENST00000564014 MAGI1Q96QZ7 1491 aaPredicted RBP29.86■■■□□ 2.37
SNHG9-202ENST00000564014 ARAP1Q96P48 1450 aa29.84■■■□□ 2.37
SNHG9-202ENST00000564014 SYNJ1O43426 1573 aa29.78■■■□□ 2.36
SNHG9-202ENST00000564014 SYNJ2O15056 1496 aa29.77■■■□□ 2.36
SNHG9-202ENST00000564014 GAPVD1Q14C86 1478 aa29.77■■■□□ 2.36
SNHG9-202ENST00000564014 CLASP1Q7Z460 1538 aa29.71■■■□□ 2.35
SNHG9-202ENST00000564014 ABCA10Q8WWZ4 1543 aa29.67■■■□□ 2.34
SNHG9-202ENST00000564014 WRNQ14191 1432 aaPredicted RBP eCLIP29.63■■■□□ 2.33
SNHG9-202ENST00000564014 PBRM1Q86U86 1689 aa29.63■■■□□ 2.33
SNHG9-202ENST00000564014 ABCA5Q8WWZ7 1642 aa29.56■■■□□ 2.32
SNHG9-202ENST00000564014 GRIN2AQ12879 1464 aa29.47■■■□□ 2.31
SNHG9-202ENST00000564014 TOP2BQ02880 1626 aa29.45■■■□□ 2.31
SNHG9-202ENST00000564014 BIVM-ERCC5R4GMW8 1640 aa29.42■■■□□ 2.3
SNHG9-202ENST00000564014 FHAD1B1AJZ9 1412 aa29.39■■■□□ 2.3
SNHG9-202ENST00000564014 ADAMTS12P58397 1594 aa29.38■■■□□ 2.29
SNHG9-202ENST00000564014 NUP160Q12769 1436 aa29.34■■■□□ 2.29
SNHG9-202ENST00000564014 CEP170Q5SW79 1584 aa29.3■■■□□ 2.28
SNHG9-202ENST00000564014 ERICH3Q5RHP9 1530 aa29.3■■■□□ 2.28
SNHG9-202ENST00000564014 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.27
SNHG9-202ENST00000564014 JPH4Q96JJ6 628 aa29.16■■■□□ 2.26
SNHG9-202ENST00000564014 PRG4Q92954 1404 aaPredicted RBP29.15■■■□□ 2.26
SNHG9-202ENST00000564014 SHROOM2Q13796 1616 aa29.13■■■□□ 2.25
SNHG9-202ENST00000564014 AEBP2Q6ZN18 517 aaPredicted RBP29.07■■■□□ 2.24
SNHG9-202ENST00000564014 NPM1P06748 294 aaKnown RBP eCLIP29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms