Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
XRCC1P18887 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.74■□□□□ 0.27
XRCC1P18887 AC092053.1-201ENST00000605787 1936 ntBASIC16.74■□□□□ 0.27
XRCC1P18887 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
XRCC1P18887 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.74■□□□□ 0.27
XRCC1P18887 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
XRCC1P18887 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.74■□□□□ 0.27
XRCC1P18887 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
XRCC1P18887 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
XRCC1P18887 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
XRCC1P18887 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.74■□□□□ 0.27
XRCC1P18887 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.74■□□□□ 0.27
XRCC1P18887 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.74■□□□□ 0.27
XRCC1P18887 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
XRCC1P18887 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
XRCC1P18887 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
XRCC1P18887 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
XRCC1P18887 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
XRCC1P18887 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
XRCC1P18887 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.74■□□□□ 0.27
XRCC1P18887 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
XRCC1P18887 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
XRCC1P18887 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
XRCC1P18887 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 LINC02012-201ENST00000608206 1725 ntBASIC16.73■□□□□ 0.27
XRCC1P18887 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.73■□□□□ 0.27
XRCC1P18887 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
XRCC1P18887 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.73■□□□□ 0.27
XRCC1P18887 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
XRCC1P18887 CROCCP1-201ENST00000426910 5675 ntBASIC16.73■□□□□ 0.27
XRCC1P18887 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 AL662844.4-201ENST00000606367 2838 ntBASIC16.73■□□□□ 0.27
XRCC1P18887 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
XRCC1P18887 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.73■□□□□ 0.27
XRCC1P18887 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
XRCC1P18887 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 KRT18P2-201ENST00000447938 1258 ntBASIC16.73■□□□□ 0.27
XRCC1P18887 HCG4B-203ENST00000450128 991 ntBASIC16.73■□□□□ 0.27
XRCC1P18887 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.73■□□□□ 0.27
XRCC1P18887 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.73■□□□□ 0.27
XRCC1P18887 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.73■□□□□ 0.27
XRCC1P18887 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.73■□□□□ 0.27
XRCC1P18887 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.73■□□□□ 0.27
XRCC1P18887 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
XRCC1P18887 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.73■□□□□ 0.27
XRCC1P18887 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.73■□□□□ 0.27
XRCC1P18887 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
XRCC1P18887 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
XRCC1P18887 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
XRCC1P18887 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.72■□□□□ 0.27
XRCC1P18887 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
XRCC1P18887 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
XRCC1P18887 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 AC092068.3-201ENST00000587894 2016 ntBASIC16.72■□□□□ 0.27
XRCC1P18887 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
XRCC1P18887 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
XRCC1P18887 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.72■□□□□ 0.27
XRCC1P18887 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
XRCC1P18887 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
XRCC1P18887 KRT18P13-201ENST00000400056 1290 ntBASIC16.72■□□□□ 0.27
XRCC1P18887 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
XRCC1P18887 BX842568.4-201ENST00000421222 227 ntBASIC16.72■□□□□ 0.27
XRCC1P18887 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms