Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC14.7□□□□□ -0.06
CPEB3Q8NE35 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CPEB3Q8NE35 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CPEB3Q8NE35 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPEB3Q8NE35 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPEB3Q8NE35 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CPEB3Q8NE35 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPEB3Q8NE35 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CPEB3Q8NE35 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CPEB3Q8NE35 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CPEB3Q8NE35 LINC00895-201ENST00000629028 1637 ntBASIC14.7□□□□□ -0.06
CPEB3Q8NE35 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 SLC22A20-204ENST00000530038 1673 ntBASIC14.69□□□□□ -0.06
CPEB3Q8NE35 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 CRYGEP-201ENST00000412192 528 ntBASIC14.69□□□□□ -0.06
CPEB3Q8NE35 PMS2P1-201ENST00000431037 1228 ntBASIC14.69□□□□□ -0.06
CPEB3Q8NE35 FAM185BP-201ENST00000443595 716 ntBASIC14.69□□□□□ -0.06
CPEB3Q8NE35 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 AC006277.1-201ENST00000624348 1610 ntBASIC14.69□□□□□ -0.06
CPEB3Q8NE35 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CPEB3Q8NE35 AC092171.3-201ENST00000610122 2651 ntBASIC14.69□□□□□ -0.06
CPEB3Q8NE35 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 IGLL3P-201ENST00000412472 434 ntBASIC14.68□□□□□ -0.06
CPEB3Q8NE35 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 HCG4B-203ENST00000450128 991 ntBASIC14.68□□□□□ -0.06
CPEB3Q8NE35 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 MIR4492-201ENST00000581627 80 ntBASIC14.68□□□□□ -0.06
CPEB3Q8NE35 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.68□□□□□ -0.06
CPEB3Q8NE35 AC013467.2-201ENST00000605472 835 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms