Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ARCN1P48444 AC131009.4-201ENST00000624048 1740 ntBASIC16.81■□□□□ 0.28
ARCN1P48444 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
ARCN1P48444 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARCN1P48444 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.81■□□□□ 0.28
ARCN1P48444 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ARCN1P48444 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
ARCN1P48444 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.8■□□□□ 0.28
ARCN1P48444 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 AC079328.2-201ENST00000561241 3354 ntBASIC16.8■□□□□ 0.28
ARCN1P48444 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 KRT8P39-201ENST00000396270 1433 ntBASIC16.8■□□□□ 0.28
ARCN1P48444 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.8■□□□□ 0.28
ARCN1P48444 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 MIR940-201ENST00000401276 94 ntBASIC16.8■□□□□ 0.28
ARCN1P48444 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.8■□□□□ 0.28
ARCN1P48444 RPL13AP23-201ENST00000480739 586 ntBASIC16.8■□□□□ 0.28
ARCN1P48444 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.8■□□□□ 0.28
ARCN1P48444 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.8■□□□□ 0.28
ARCN1P48444 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.8■□□□□ 0.28
ARCN1P48444 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 AC117500.6-201ENST00000624871 588 ntBASIC16.8■□□□□ 0.28
ARCN1P48444 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.8■□□□□ 0.28
ARCN1P48444 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 AC005052.1-201ENST00000625181 2492 ntBASIC16.8■□□□□ 0.28
ARCN1P48444 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.8■□□□□ 0.28
ARCN1P48444 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
ARCN1P48444 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ARCN1P48444 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.79■□□□□ 0.28
ARCN1P48444 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
ARCN1P48444 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 GGT3P-204ENST00000453783 1664 ntBASIC16.79■□□□□ 0.28
ARCN1P48444 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.79■□□□□ 0.28
ARCN1P48444 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 AL356488.2-201ENST00000602755 427 ntBASIC16.79■□□□□ 0.28
ARCN1P48444 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.79■□□□□ 0.28
ARCN1P48444 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ARCN1P48444 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.79■□□□□ 0.28
ARCN1P48444 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 AC104109.2-201ENST00000602919 1418 ntBASIC16.79■□□□□ 0.28
ARCN1P48444 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ARCN1P48444 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
ARCN1P48444 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.78■□□□□ 0.28
ARCN1P48444 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ARCN1P48444 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.78■□□□□ 0.28
ARCN1P48444 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARCN1P48444 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARCN1P48444 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ARCN1P48444 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARCN1P48444 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARCN1P48444 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ARCN1P48444 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARCN1P48444 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARCN1P48444 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ARCN1P48444 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms