Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.96■□□□□ 0.151e-6■■□□□ 14
RPS3P23396 HNRNPD-205ENST00000507010 748 ntTSL 323.96■■□□□ 1.433e-18■■□□□ 14
RPS3P23396 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.313e-18■■□□□ 14
RPS3P23396 HNRNPD-209ENST00000513584 1240 ntTSL 223.23■■□□□ 1.313e-18■■□□□ 14
RPS3P23396 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.163e-18■■□□□ 14
RPS3P23396 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.363e-18■■□□□ 14
RPS3P23396 SNU13-208ENST00000488571 556 ntTSL 510.77□□□□□ -0.693e-18■■□□□ 14
RPS3P23396 SNU13-206ENST00000469028 736 ntTSL 510.75□□□□□ -0.693e-18■■□□□ 14
RPS3P23396 HNRNPD-208ENST00000509263 782 ntTSL 58.67□□□□□ -1.023e-18■■□□□ 14
RPS3P23396 HNRNPD-211ENST00000514671 1089 ntTSL 58.55□□□□□ -1.043e-18■■□□□ 14
RPS3P23396 HNRNPD-212ENST00000515432 545 ntTSL 56.29□□□□□ -1.43e-18■■□□□ 14
RPS3P23396 HNRNPD-210ENST00000514325 4597 ntTSL 1 (best)4.64□□□□□ -1.673e-18■■□□□ 14
RPS3P23396 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.79□□□□□ -1.322e-6■■□□□ 14
RPS3P23396 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.116e-11■■□□□ 14
RPS3P23396 SF3A2-203ENST00000587637 501 ntTSL 216.02■□□□□ 0.165e-26■■□□□ 14
RPS3P23396 SLC52A2-212ENST00000533662 1106 ntTSL 223.91■■□□□ 1.421e-6■■□□□ 14
RPS3P23396 SLC52A2-203ENST00000524541 495 ntTSL 419.5■□□□□ 0.711e-6■■□□□ 14
RPS3P23396 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.43■■□□□ 1.822e-6■■□□□ 14
RPS3P23396 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.272e-6■■□□□ 14
RPS3P23396 MZT2B-204ENST00000455239 401 ntAPPRIS ALT2 TSL 217.44■□□□□ 0.382e-6■■□□□ 14
RPS3P23396 MZT2B-203ENST00000425361 455 ntAPPRIS ALT2 TSL 216.06■□□□□ 0.162e-6■■□□□ 14
RPS3P23396 MZT2B-205ENST00000457492 435 ntAPPRIS ALT2 TSL 513.74□□□□□ -0.212e-6■■□□□ 14
RPS3P23396 H3F3B-203ENST00000586518 1701 nt29.63■■■□□ 2.334e-10■■□□□ 14
RPS3P23396 H3F3B-209ENST00000589949 842 ntTSL 217.27■□□□□ 0.364e-10■■□□□ 14
RPS3P23396 H3F3B-207ENST00000589417 575 ntTSL 217.15■□□□□ 0.341e-15■■□□□ 14
RPS3P23396 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.224e-10■■□□□ 14
RPS3P23396 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.334e-10■■□□□ 14
RPS3P23396 H3F3B-213ENST00000593254 894 ntTSL 512.73□□□□□ -0.374e-10■■□□□ 14
RPS3P23396 H3F3B-205ENST00000587171 586 ntTSL 212.73□□□□□ -0.371e-15■■□□□ 14
RPS3P23396 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC11.57□□□□□ -0.564e-10■■□□□ 14
RPS3P23396 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC10.43□□□□□ -0.744e-10■■□□□ 14
RPS3P23396 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC9.6□□□□□ -0.874e-10■■□□□ 14
RPS3P23396 TMEM214-206ENST00000435172 1480 ntTSL 515.35■□□□□ 0.052e-9■■□□□ 14
RPS3P23396 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.041e-6■■□□□ 14
RPS3P23396 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.69□□□□□ -0.221e-6■■□□□ 14
RPS3P23396 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.251e-6■■□□□ 14
RPS3P23396 AURKB-207ENST00000580998 746 ntTSL 312.14□□□□□ -0.471e-6■■□□□ 14
RPS3P23396 AURKB-204ENST00000578549 939 ntTSL 1 (best) BASIC11.21□□□□□ -0.611e-6■■□□□ 14
RPS3P23396 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.18■□□□□ 0.341e-11■■□□□ 14
RPS3P23396 NPTN-207ENST00000564551 586 ntTSL 313.82□□□□□ -0.21e-11■■□□□ 14
RPS3P23396 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.231e-11■■□□□ 14
RPS3P23396 NPTN-209ENST00000565325 858 ntTSL 213.24□□□□□ -0.291e-11■■□□□ 14
RPS3P23396 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.02□□□□□ -0.331e-11■■□□□ 14
RPS3P23396 NPTN-205ENST00000563691 1214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.511e-11■■□□□ 14
RPS3P23396 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16■□□□□ 0.155e-12■■□□□ 14
RPS3P23396 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.145e-12■■□□□ 14
RPS3P23396 KDELR2-205ENST00000463747 376 ntTSL 59.86□□□□□ -0.835e-12■■□□□ 14
RPS3P23396 KDELR2-203ENST00000454368 2478 ntTSL 29.79□□□□□ -0.845e-12■■□□□ 14
RPS3P23396 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.95□□□□□ -1.465e-12■■□□□ 14
RPS3P23396 TALDO1-204ENST00000530119 1191 ntTSL 211.03□□□□□ -0.641e-10■■□□□ 14
RPS3P23396 PTOV1-205ENST00000595934 1880 nt23.16■■□□□ 1.34e-6■■□□□ 14
RPS3P23396 PTOV1-207ENST00000596424 625 ntTSL 217.77■□□□□ 0.444e-6■■□□□ 14
RPS3P23396 PTOV1-213ENST00000600105 635 ntTSL 317.55■□□□□ 0.44e-6■■□□□ 14
RPS3P23396 RACK1-233ENST00000514455 791 ntTSL 2 BASIC9.74□□□□□ -0.851e-33■■□□□ 14
RPS3P23396 CTSB-224ENST00000532392 570 ntTSL 414.15□□□□□ -0.142e-13■■□□□ 14
RPS3P23396 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.85■□□□□ 0.452e-12■■□□□ 14
RPS3P23396 FBLN1-213ENST00000455233 671 ntTSL 317.62■□□□□ 0.414e-9■■□□□ 14
RPS3P23396 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.21e-12■■□□□ 14
RPS3P23396 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC13.18□□□□□ -0.31e-12■■□□□ 14
RPS3P23396 COCH-209ENST00000555881 782 ntTSL 221.45■■□□□ 1.023e-10■■□□□ 14
RPS3P23396 COCH-208ENST00000555117 619 ntTSL 221.45■■□□□ 1.023e-10■■□□□ 14
RPS3P23396 COCH-206ENST00000553772 554 ntTSL 419.6■□□□□ 0.733e-10■■□□□ 14
RPS3P23396 COCH-210ENST00000556908 775 ntTSL 318.75■□□□□ 0.593e-10■■□□□ 14
RPS3P23396 HNRNPUL1-210ENST00000595806 1659 ntTSL 220.36■□□□□ 0.854e-6■■□□□ 14
RPS3P23396 IFITM2-203ENST00000527146 634 ntTSL 312.61□□□□□ -0.394e-6■■□□□ 14
RPS3P23396 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.254e-12■■□□□ 14
RPS3P23396 ACTB-205ENST00000432588 568 ntTSL 415.5■□□□□ 0.073e-30■■□□□ 14
RPS3P23396 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.52□□□□□ -0.091e-9■■□□□ 14
RPS3P23396 ERBB3-205ENST00000546884 660 ntTSL 214.52□□□□□ -0.091e-9■■□□□ 14
RPS3P23396 ERBB3-207ENST00000549061 560 ntTSL 413.68□□□□□ -0.221e-9■■□□□ 14
RPS3P23396 ERBB3-209ENST00000549282 561 ntTSL 413.57□□□□□ -0.241e-9■■□□□ 14
RPS3P23396 CLN3-208ENST00000561505 495 ntTSL 1 (best)15.67■□□□□ 0.13e-6■■□□□ 14
RPS3P23396 CLN3-264ENST00000637985 764 ntTSL 515.41■□□□□ 0.063e-6■■□□□ 14
RPS3P23396 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.256e-7■■□□□ 14
RPS3P23396 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.096e-7■■□□□ 14
RPS3P23396 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.26e-7■■□□□ 14
RPS3P23396 SUB1-207ENST00000510442 580 ntTSL 318.96■□□□□ 0.632e-8■■□□□ 14
RPS3P23396 LGMN-204ENST00000553802 573 ntTSL 315.37■□□□□ 0.054e-8■■□□□ 14
RPS3P23396 LGMN-203ENST00000553371 495 ntTSL 415.37■□□□□ 0.054e-8■■□□□ 14
RPS3P23396 LGMN-207ENST00000554189 570 ntTSL 415.37■□□□□ 0.054e-8■■□□□ 14
RPS3P23396 LGMN-206ENST00000554080 588 ntTSL 415.37■□□□□ 0.054e-8■■□□□ 14
RPS3P23396 LGMN-209ENST00000554919 546 ntTSL 415.37■□□□□ 0.054e-8■■□□□ 14
RPS3P23396 LGMN-208ENST00000554397 533 ntTSL 415.37■□□□□ 0.054e-8■■□□□ 14
RPS3P23396 LGMN-212ENST00000556097 1054 ntTSL 514.76□□□□□ -0.054e-8■■□□□ 14
RPS3P23396 LGMN-218ENST00000557694 949 ntTSL 214.76□□□□□ -0.054e-8■■□□□ 14
RPS3P23396 LGMN-215ENST00000557315 556 ntTSL 213.98□□□□□ -0.174e-8■■□□□ 14
RPS3P23396 LGMN-205ENST00000553918 283 ntTSL 36.1□□□□□ -1.434e-8■■□□□ 14
RPS3P23396 SHMT2-208ENST00000553868 941 ntTSL 214.26□□□□□ -0.133e-9■■□□□ 14
RPS3P23396 PSME1-207ENST00000560420 922 ntTSL 214.28□□□□□ -0.123e-9■■□□□ 14
RPS3P23396 PSME1-206ENST00000559741 763 ntTSL 39.77□□□□□ -0.853e-9■■□□□ 14
RPS3P23396 PSME1-204ENST00000558112 651 ntTSL 58.74□□□□□ -1.013e-9■■□□□ 14
RPS3P23396 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.872e-12■■□□□ 14
RPS3P23396 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC3.41□□□□□ -1.862e-12■■□□□ 14
RPS3P23396 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.57e-7■■□□□ 14
RPS3P23396 CIAO1-201ENST00000272402 3588 ntTSL 211.54□□□□□ -0.567e-7■■□□□ 14
RPS3P23396 ACTB-210ENST00000477812 820 ntTSL 219.66■□□□□ 0.743e-30■■□□□ 14
RPS3P23396 ACSL3-209ENST00000535678 560 ntTSL 318.94■□□□□ 0.622e-11■■□□□ 14
RPS3P23396 SREBF1-213ENST00000485080 1230 ntTSL 517.41■□□□□ 0.382e-8■■□□□ 14
RPS3P23396 SREBF1-218ENST00000578469 588 ntTSL 316.81■□□□□ 0.282e-8■■□□□ 14
RPS3P23396 UXS1-202ENST00000409032 1935 ntTSL 1 (best) BASIC10.18□□□□□ -0.786e-7■■□□□ 14
Retrieved 100 of 24,271 protein–RNA pairs in 289.8 ms