RNA–Protein interactions for RNA: ENST00000533662.1

SLC52A2-212, Transcript of solute carrier family 52 member 2, humanhuman

TSL 2

Gene SLC52A2, Length 1,106 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A2-212ENST00000533662 NISCHQ9Y2I1 1504 aa59.51■■■■■ 7.12
SLC52A2-212ENST00000533662 CCDC180Q9P1Z9 1646 aa53.01■■■■■ 6.08
SLC52A2-212ENST00000533662 ABCC9O60706 1549 aa51.69■■■■■ 5.86
SLC52A2-212ENST00000533662 RB1CC1Q8TDY2 1594 aa49.78■■■■■ 5.56
SLC52A2-212ENST00000533662 NACADO15069 1562 aa49.7■■■■■ 5.55
SLC52A2-212ENST00000533662 DCAF8L2P0C7V8 631 aa49.62■■■■■ 5.53
SLC52A2-212ENST00000533662 ZCCHC6Q5VYS8 1495 aaKnown RBP49.61■■■■■ 5.53
SLC52A2-212ENST00000533662 MYO15BQ96JP2 1530 aa49.38■■■■■ 5.5
SLC52A2-212ENST00000533662 DCAF1Q9Y4B6 1507 aa49.23■■■■■ 5.47
SLC52A2-212ENST00000533662 UNC13AQ9UPW8 1703 aa48.89■■■■■ 5.42
SLC52A2-212ENST00000533662 SCRIBQ14160 1630 aa48.36■■■■■ 5.33
SLC52A2-212ENST00000533662 BICRAQ9NZM4 1560 aa48.3■■■■■ 5.32
SLC52A2-212ENST00000533662 PABPN1Q86U42 306 aaKnown RBP eCLIP48.23■■■■■ 5.31
SLC52A2-212ENST00000533662 SHROOM4Q9ULL8 1493 aa47.7■■■■■ 5.23
SLC52A2-212ENST00000533662 DNAJC5BQ9UF47 199 aa47.28■■■■■ 5.16
SLC52A2-212ENST00000533662 EIF4G1Q04637 1599 aaKnown RBP47■■■■■ 5.11
SLC52A2-212ENST00000533662 CC2D2AQ9P2K1 1620 aa46.82■■■■■ 5.09
SLC52A2-212ENST00000533662 CECR2Q9BXF3 1484 aa46.4■■■■■ 5.02
SLC52A2-212ENST00000533662 SMARCA4P51532 1647 aa46.25■■■■■ 4.99
SLC52A2-212ENST00000533662 BAZ1AQ9NRL2 1556 aaPredicted RBP46.14■■■■■ 4.98
SLC52A2-212ENST00000533662 MROH2BQ7Z745 1585 aa45.89■■■■■ 4.94
SLC52A2-212ENST00000533662 ATAD2BQ9ULI0 1458 aa45.87■■■■■ 4.93
SLC52A2-212ENST00000533662 SMARCA2P51531 1590 aa45.85■■■■■ 4.93
SLC52A2-212ENST00000533662 NCAPD3P42695 1498 aa45.8■■■■■ 4.92
SLC52A2-212ENST00000533662 PEG3Q9GZU2 1588 aa45.74■■■■■ 4.91
SLC52A2-212ENST00000533662 HMGXB3Q12766 1538 aa45.67■■■■■ 4.9
SLC52A2-212ENST00000533662 BAZ1BQ9UIG0 1483 aaKnown RBP45.53■■■■■ 4.88
SLC52A2-212ENST00000533662 WIZO95785 1651 aa45.5■■■■■ 4.87
SLC52A2-212ENST00000533662 RSF1Q96T23 1441 aaPredicted RBP45.33■■■■■ 4.85
SLC52A2-212ENST00000533662 TOP2AP11388 1531 aaKnown RBP44.94■■■■■ 4.78
SLC52A2-212ENST00000533662 NESP48681 1621 aa44.78■■■■■ 4.76
SLC52A2-212ENST00000533662 LAMC3Q9Y6N6 1575 aa44.68■■■■■ 4.74
SLC52A2-212ENST00000533662 ERCC6Q03468 1493 aa44.53■■■■■ 4.72
SLC52A2-212ENST00000533662 CADPSQ9ULU8 1353 aa44.45■■■■■ 4.71
SLC52A2-212ENST00000533662 KIF21AQ7Z4S6 1674 aa44.4■■■■■ 4.7
SLC52A2-212ENST00000533662 CCDC88BA6NC98 1476 aa44.36■■■■■ 4.69
SLC52A2-212ENST00000533662 PDS5BQ9NTI5 1447 aa44.27■■■■■ 4.68
SLC52A2-212ENST00000533662 CFTRP13569 1480 aa44.24■■■■■ 4.67
SLC52A2-212ENST00000533662 SUPT5HO00267 1087 aaKnown RBP44.23■■■■■ 4.67
SLC52A2-212ENST00000533662 PRDM2Q13029 1718 aa44.21■■■■■ 4.67
SLC52A2-212ENST00000533662 THOC2Q8NI27 1593 aaKnown RBP44.15■■■■■ 4.66
SLC52A2-212ENST00000533662 CUX2O14529 1486 aa44.01■■■■■ 4.64
SLC52A2-212ENST00000533662 FANCD2Q9BXW9 1451 aa44.01■■■■■ 4.64
SLC52A2-212ENST00000533662 CEP164Q9UPV0 1460 aa43.96■■■■■ 4.63
SLC52A2-212ENST00000533662 MRC2Q9UBG0 1479 aa43.88■■■■■ 4.61
SLC52A2-212ENST00000533662 WDR62O43379 1518 aa43.76■■■■■ 4.6
SLC52A2-212ENST00000533662 URB2Q14146 1524 aaKnown RBP43.59■■■■■ 4.57
SLC52A2-212ENST00000533662 TOPBP1Q92547 1522 aa43.34■■■■■ 4.53
SLC52A2-212ENST00000533662 DNMBPQ6XZF7 1577 aa43.33■■■■■ 4.53
SLC52A2-212ENST00000533662 ABCC8Q09428 1581 aa43.28■■■■■ 4.52
SLC52A2-212ENST00000533662 CUX1P39880 1505 aa43.06■■■■■ 4.48
SLC52A2-212ENST00000533662 IFT140Q96RY7 1462 aa43■■■■■ 4.47
SLC52A2-212ENST00000533662 POLA1P09884 1462 aaPredicted RBP42.97■■■■■ 4.47
SLC52A2-212ENST00000533662 TARBP1Q13395 1621 aaKnown RBP42.91■■■■■ 4.46
SLC52A2-212ENST00000533662 FGD5Q6ZNL6 1462 aa42.89■■■■■ 4.46
SLC52A2-212ENST00000533662 ZNF608Q9ULD9 1512 aaPredicted RBP42.84■■■■■ 4.45
SLC52A2-212ENST00000533662 BIVM-ERCC5R4GMW8 1640 aa42.79■■■■■ 4.44
SLC52A2-212ENST00000533662 RAD54L2Q9Y4B4 1467 aa42.78■■■■■ 4.44
SLC52A2-212ENST00000533662 EIF4G3O43432 1585 aaKnown RBP42.77■■■■■ 4.44
SLC52A2-212ENST00000533662 SYNJ1O43426 1573 aa42.75■■■■■ 4.43
SLC52A2-212ENST00000533662 WRNQ14191 1432 aaPredicted RBP eCLIP42.75■■■■■ 4.43
SLC52A2-212ENST00000533662 SOGA1O94964 1423 aa42.73■■■■■ 4.43
SLC52A2-212ENST00000533662 TOP2BQ02880 1626 aa42.73■■■■■ 4.43
SLC52A2-212ENST00000533662 WDR97A6NE52 1622 aa42.68■■■■■ 4.42
SLC52A2-212ENST00000533662 AQRO60306 1485 aaKnown RBP eCLIP42.57■■■■■ 4.41
SLC52A2-212ENST00000533662 DNAJC5Q9H3Z4 198 aa42.49■■■■■ 4.39
SLC52A2-212ENST00000533662 TDRD9Q8NDG6 1382 aaKnown RBP42.49■■■■■ 4.39
SLC52A2-212ENST00000533662 ABCA10Q8WWZ4 1543 aa42.45■■■■■ 4.39
SLC52A2-212ENST00000533662 PBRM1Q86U86 1689 aa42.39■■■■■ 4.38
SLC52A2-212ENST00000533662 ABCA5Q8WWZ7 1642 aa42.36■■■■■ 4.37
SLC52A2-212ENST00000533662 CHD1O14646 1710 aa42.32■■■■■ 4.36
SLC52A2-212ENST00000533662 GAPVD1Q14C86 1478 aa42.28■■■■■ 4.36
SLC52A2-212ENST00000533662 GRIN2BQ13224 1484 aa42.25■■■■■ 4.35
SLC52A2-212ENST00000533662 SNAPC4Q5SXM2 1469 aa42.23■■■■■ 4.35
SLC52A2-212ENST00000533662 MAGI1Q96QZ7 1491 aaPredicted RBP42.14■■■■■ 4.34
SLC52A2-212ENST00000533662 OSCARQ8IYS5 282 aa42.12■■■■■ 4.33
SLC52A2-212ENST00000533662 FBLN2P98095 1184 aa42.02■■■■■ 4.32
SLC52A2-212ENST00000533662 SYNJ2O15056 1496 aa41.98■■■■■ 4.31
SLC52A2-212ENST00000533662 ERICH3Q5RHP9 1530 aa41.96■■■■■ 4.31
SLC52A2-212ENST00000533662 ADAMTS12P58397 1594 aa41.95■■■■■ 4.31
SLC52A2-212ENST00000533662 CHMP7Q8WUX9 453 aaPredicted RBP41.89■■■■■ 4.3
SLC52A2-212ENST00000533662 KIF27Q86VH2 1401 aa41.83■■■■■ 4.29
SLC52A2-212ENST00000533662 FHAD1B1AJZ9 1412 aa41.77■■■■■ 4.28
SLC52A2-212ENST00000533662 GRIN2AQ12879 1464 aa41.74■■■■■ 4.27
SLC52A2-212ENST00000533662 TRIM41Q8WV44 630 aa41.73■■■■■ 4.27
SLC52A2-212ENST00000533662 CLASP1Q7Z460 1538 aa41.7■■■■■ 4.27
SLC52A2-212ENST00000533662 CUL7Q14999 1698 aa41.68■■■■■ 4.26
SLC52A2-212ENST00000533662 RIMBP3CA6NJZ7 1639 aa41.63■■■■■ 4.26
SLC52A2-212ENST00000533662 RIMBP3BA6NNM3 1639 aa41.63■■■■■ 4.26
SLC52A2-212ENST00000533662 RIMBP3Q9UFD9 1639 aa41.63■■■■■ 4.26
SLC52A2-212ENST00000533662 IGF1RP08069 1367 aa41.62■■■■■ 4.25
SLC52A2-212ENST00000533662 CEP170Q5SW79 1584 aa41.59■■■■■ 4.25
SLC52A2-212ENST00000533662 ARHGEF11O15085 1522 aa41.57■■■■■ 4.25
SLC52A2-212ENST00000533662 RUSC2Q8N2Y8 1516 aa41.54■■■■■ 4.24
SLC52A2-212ENST00000533662 NUP160Q12769 1436 aa41.52■■■■■ 4.24
SLC52A2-212ENST00000533662 CARMIL1Q5VZK9 1371 aa41.39■■■■■ 4.22
SLC52A2-212ENST00000533662 SHROOM2Q13796 1616 aa41.3■■■■■ 4.2
SLC52A2-212ENST00000533662 CHIC1Q5VXU3 224 aa41.3■■■■■ 4.2
SLC52A2-212ENST00000533662 ARAP1Q96P48 1450 aa41.23■■■■■ 4.19
SLC52A2-212ENST00000533662 RAPGEF2Q9Y4G8 1499 aa41.2■■■■■ 4.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms