RNA–Protein interactions for RNA: ENST00000546884.1

ERBB3-205, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 2

Gene ERBB3, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-205ENST00000546884 NISCHQ9Y2I1 1504 aa35.77■■■■□ 3.32
ERBB3-205ENST00000546884 CCDC180Q9P1Z9 1646 aa31.63■■■□□ 2.65
ERBB3-205ENST00000546884 ABCC9O60706 1549 aa30.78■■■□□ 2.52
ERBB3-205ENST00000546884 ZCCHC6Q5VYS8 1495 aaKnown RBP29.83■■■□□ 2.37
ERBB3-205ENST00000546884 DCAF8L2P0C7V8 631 aa29.74■■■□□ 2.35
ERBB3-205ENST00000546884 NACADO15069 1562 aa29.69■■■□□ 2.34
ERBB3-205ENST00000546884 RB1CC1Q8TDY2 1594 aa29.64■■■□□ 2.33
ERBB3-205ENST00000546884 MYO15BQ96JP2 1530 aa29.6■■■□□ 2.33
ERBB3-205ENST00000546884 DCAF1Q9Y4B6 1507 aa29.56■■■□□ 2.32
ERBB3-205ENST00000546884 UNC13AQ9UPW8 1703 aa29.11■■■□□ 2.25
ERBB3-205ENST00000546884 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
ERBB3-205ENST00000546884 BICRAQ9NZM4 1560 aa28.88■■■□□ 2.21
ERBB3-205ENST00000546884 PABPN1Q86U42 306 aaKnown RBP eCLIP28.85■■■□□ 2.21
ERBB3-205ENST00000546884 SHROOM4Q9ULL8 1493 aa28.41■■■□□ 2.14
ERBB3-205ENST00000546884 DNAJC5BQ9UF47 199 aa28.19■■■□□ 2.1
ERBB3-205ENST00000546884 EIF4G1Q04637 1599 aaKnown RBP28.03■■■□□ 2.08
ERBB3-205ENST00000546884 CECR2Q9BXF3 1484 aa27.9■■■□□ 2.06
ERBB3-205ENST00000546884 CC2D2AQ9P2K1 1620 aa27.86■■■□□ 2.05
ERBB3-205ENST00000546884 SMARCA4P51532 1647 aa27.69■■■□□ 2.02
ERBB3-205ENST00000546884 BAZ1AQ9NRL2 1556 aaPredicted RBP27.65■■■□□ 2.02
ERBB3-205ENST00000546884 MROH2BQ7Z745 1585 aa27.61■■■□□ 2.01
ERBB3-205ENST00000546884 ATAD2BQ9ULI0 1458 aa27.5■■□□□ 1.99
ERBB3-205ENST00000546884 NCAPD3P42695 1498 aa27.44■■□□□ 1.98
ERBB3-205ENST00000546884 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
ERBB3-205ENST00000546884 SMARCA2P51531 1590 aa27.39■■□□□ 1.97
ERBB3-205ENST00000546884 RSF1Q96T23 1441 aaPredicted RBP27.37■■□□□ 1.97
ERBB3-205ENST00000546884 WIZO95785 1651 aa27.33■■□□□ 1.97
ERBB3-205ENST00000546884 HMGXB3Q12766 1538 aa27.27■■□□□ 1.96
ERBB3-205ENST00000546884 BAZ1BQ9UIG0 1483 aaKnown RBP27.22■■□□□ 1.95
ERBB3-205ENST00000546884 TOP2AP11388 1531 aaKnown RBP26.97■■□□□ 1.91
ERBB3-205ENST00000546884 SUPT5HO00267 1087 aaKnown RBP26.8■■□□□ 1.88
ERBB3-205ENST00000546884 NESP48681 1621 aa26.76■■□□□ 1.87
ERBB3-205ENST00000546884 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
ERBB3-205ENST00000546884 CADPSQ9ULU8 1353 aa26.63■■□□□ 1.85
ERBB3-205ENST00000546884 LAMC3Q9Y6N6 1575 aa26.63■■□□□ 1.85
ERBB3-205ENST00000546884 CFTRP13569 1480 aa26.54■■□□□ 1.84
ERBB3-205ENST00000546884 KIF21AQ7Z4S6 1674 aa26.42■■□□□ 1.82
ERBB3-205ENST00000546884 ERCC6Q03468 1493 aa26.41■■□□□ 1.82
ERBB3-205ENST00000546884 PDS5BQ9NTI5 1447 aa26.4■■□□□ 1.82
ERBB3-205ENST00000546884 PRDM2Q13029 1718 aa26.33■■□□□ 1.81
ERBB3-205ENST00000546884 FANCD2Q9BXW9 1451 aa26.31■■□□□ 1.8
ERBB3-205ENST00000546884 THOC2Q8NI27 1593 aaKnown RBP26.26■■□□□ 1.79
ERBB3-205ENST00000546884 CEP164Q9UPV0 1460 aa26.22■■□□□ 1.79
ERBB3-205ENST00000546884 MRC2Q9UBG0 1479 aa26.16■■□□□ 1.78
ERBB3-205ENST00000546884 WDR62O43379 1518 aa26.09■■□□□ 1.77
ERBB3-205ENST00000546884 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
ERBB3-205ENST00000546884 CUX2O14529 1486 aa26.08■■□□□ 1.77
ERBB3-205ENST00000546884 TOPBP1Q92547 1522 aa25.94■■□□□ 1.74
ERBB3-205ENST00000546884 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
ERBB3-205ENST00000546884 CUX1P39880 1505 aa25.87■■□□□ 1.73
ERBB3-205ENST00000546884 ABCC8Q09428 1581 aa25.86■■□□□ 1.73
ERBB3-205ENST00000546884 POLA1P09884 1462 aaPredicted RBP25.74■■□□□ 1.71
ERBB3-205ENST00000546884 WRNQ14191 1432 aaPredicted RBP eCLIP25.72■■□□□ 1.71
ERBB3-205ENST00000546884 SYNJ1O43426 1573 aa25.72■■□□□ 1.71
ERBB3-205ENST00000546884 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
ERBB3-205ENST00000546884 TARBP1Q13395 1621 aaKnown RBP25.68■■□□□ 1.7
ERBB3-205ENST00000546884 BIVM-ERCC5R4GMW8 1640 aa25.68■■□□□ 1.7
ERBB3-205ENST00000546884 IFT140Q96RY7 1462 aa25.67■■□□□ 1.7
ERBB3-205ENST00000546884 TOP2BQ02880 1626 aa25.67■■□□□ 1.7
ERBB3-205ENST00000546884 RAD54L2Q9Y4B4 1467 aa25.66■■□□□ 1.7
ERBB3-205ENST00000546884 ZNF608Q9ULD9 1512 aaPredicted RBP25.63■■□□□ 1.69
ERBB3-205ENST00000546884 SOGA1O94964 1423 aa25.62■■□□□ 1.69
ERBB3-205ENST00000546884 WDR97A6NE52 1622 aa25.52■■□□□ 1.68
ERBB3-205ENST00000546884 AQRO60306 1485 aaKnown RBP eCLIP25.5■■□□□ 1.672e-8■■■■□ 19.4
ERBB3-205ENST00000546884 EIF4G3O43432 1585 aaKnown RBP25.48■■□□□ 1.67
ERBB3-205ENST00000546884 TDRD9Q8NDG6 1382 aaKnown RBP25.48■■□□□ 1.67
ERBB3-205ENST00000546884 ABCA10Q8WWZ4 1543 aa25.46■■□□□ 1.67
ERBB3-205ENST00000546884 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
ERBB3-205ENST00000546884 GAPVD1Q14C86 1478 aa25.32■■□□□ 1.64
ERBB3-205ENST00000546884 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
ERBB3-205ENST00000546884 TRIM41Q8WV44 630 aa25.26■■□□□ 1.63
ERBB3-205ENST00000546884 GRIN2BQ13224 1484 aa25.26■■□□□ 1.63
ERBB3-205ENST00000546884 SNAPC4Q5SXM2 1469 aa25.23■■□□□ 1.63
ERBB3-205ENST00000546884 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
ERBB3-205ENST00000546884 MAGI1Q96QZ7 1491 aaPredicted RBP25.16■■□□□ 1.62
ERBB3-205ENST00000546884 RUSC2Q8N2Y8 1516 aa25.15■■□□□ 1.62
ERBB3-205ENST00000546884 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
ERBB3-205ENST00000546884 CHD1O14646 1710 aa25.14■■□□□ 1.61
ERBB3-205ENST00000546884 ERICH3Q5RHP9 1530 aa25.13■■□□□ 1.61
ERBB3-205ENST00000546884 IGF1RP08069 1367 aa25.1■■□□□ 1.61
ERBB3-205ENST00000546884 DNAJC5Q9H3Z4 198 aa25.08■■□□□ 1.61
ERBB3-205ENST00000546884 SYNJ2O15056 1496 aa25.08■■□□□ 1.6
ERBB3-205ENST00000546884 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
ERBB3-205ENST00000546884 FBLN2P98095 1184 aa25.06■■□□□ 1.6
ERBB3-205ENST00000546884 OSCARQ8IYS5 282 aa25.06■■□□□ 1.6
ERBB3-205ENST00000546884 CHMP7Q8WUX9 453 aaPredicted RBP25.03■■□□□ 1.6
ERBB3-205ENST00000546884 FHAD1B1AJZ9 1412 aa25.03■■□□□ 1.6
ERBB3-205ENST00000546884 GRIN2AQ12879 1464 aa24.96■■□□□ 1.59
ERBB3-205ENST00000546884 CUL7Q14999 1698 aa24.93■■□□□ 1.58
ERBB3-205ENST00000546884 CARMIL1Q5VZK9 1371 aa24.91■■□□□ 1.58
ERBB3-205ENST00000546884 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
ERBB3-205ENST00000546884 CLASP1Q7Z460 1538 aa24.87■■□□□ 1.57
ERBB3-205ENST00000546884 NUP160Q12769 1436 aa24.86■■□□□ 1.57
ERBB3-205ENST00000546884 CSRNP3Q8WYN3 585 aa24.8■■□□□ 1.56
ERBB3-205ENST00000546884 PRXQ9BXM0 1461 aa24.79■■□□□ 1.56
ERBB3-205ENST00000546884 FAM9AQ8IZU1 332 aaPredicted RBP24.78■■□□□ 1.56
ERBB3-205ENST00000546884 EEA1Q15075 1411 aa24.78■■□□□ 1.56
ERBB3-205ENST00000546884 RAPGEF2Q9Y4G8 1499 aa24.77■■□□□ 1.56
ERBB3-205ENST00000546884 RIMBP3CA6NJZ7 1639 aa24.68■■□□□ 1.54
ERBB3-205ENST00000546884 RIMBP3BA6NNM3 1639 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms