RNA–Protein interactions for RNA: ENST00000553918.1

LGMN-205, Transcript of legumain, humanhuman

TSL 3

Gene LGMN, Length 283 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-205ENST00000553918 NISCHQ9Y2I1 1504 aa16.84■□□□□ 0.29
LGMN-205ENST00000553918 ABCC9O60706 1549 aa15.56■□□□□ 0.08
LGMN-205ENST00000553918 CCDC180Q9P1Z9 1646 aa15.11■□□□□ 0.01
LGMN-205ENST00000553918 DNAJC5BQ9UF47 199 aa14.98□□□□□ -0.01
LGMN-205ENST00000553918 RB1CC1Q8TDY2 1594 aa14.6□□□□□ -0.07
LGMN-205ENST00000553918 PABPN1Q86U42 306 aaKnown RBP eCLIP14.51□□□□□ -0.09
LGMN-205ENST00000553918 NACADO15069 1562 aa14.45□□□□□ -0.1
LGMN-205ENST00000553918 DCAF8L2P0C7V8 631 aa14.42□□□□□ -0.1
LGMN-205ENST00000553918 BICRAQ9NZM4 1560 aa14.22□□□□□ -0.13
LGMN-205ENST00000553918 MYO15BQ96JP2 1530 aa14.18□□□□□ -0.14
LGMN-205ENST00000553918 UNC13AQ9UPW8 1703 aa14.13□□□□□ -0.15
LGMN-205ENST00000553918 CECR2Q9BXF3 1484 aa14.05□□□□□ -0.16
LGMN-205ENST00000553918 SHROOM4Q9ULL8 1493 aa13.99□□□□□ -0.17
LGMN-205ENST00000553918 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
LGMN-205ENST00000553918 DNAJC5Q9H3Z4 198 aa13.97□□□□□ -0.17
LGMN-205ENST00000553918 EIF4G1Q04637 1599 aaKnown RBP13.89□□□□□ -0.19
LGMN-205ENST00000553918 DCAF1Q9Y4B6 1507 aa13.88□□□□□ -0.19
LGMN-205ENST00000553918 ZCCHC6Q5VYS8 1495 aaKnown RBP13.87□□□□□ -0.19
LGMN-205ENST00000553918 SCRIBQ14160 1630 aa13.79□□□□□ -0.2
LGMN-205ENST00000553918 CUX2O14529 1486 aa13.52□□□□□ -0.25
LGMN-205ENST00000553918 NCAPD3P42695 1498 aa13.42□□□□□ -0.26
LGMN-205ENST00000553918 ERCC6Q03468 1493 aa13.42□□□□□ -0.26
LGMN-205ENST00000553918 ATAD2BQ9ULI0 1458 aa13.31□□□□□ -0.28
LGMN-205ENST00000553918 NESP48681 1621 aa13.28□□□□□ -0.28
LGMN-205ENST00000553918 HMGXB3Q12766 1538 aa13.21□□□□□ -0.29
LGMN-205ENST00000553918 SMARCA2P51531 1590 aa13.2□□□□□ -0.3
LGMN-205ENST00000553918 TRIM41Q8WV44 630 aa13.19□□□□□ -0.3
LGMN-205ENST00000553918 SMARCA4P51532 1647 aa13.13□□□□□ -0.31
LGMN-205ENST00000553918 BAZ1BQ9UIG0 1483 aaKnown RBP13.13□□□□□ -0.31
LGMN-205ENST00000553918 THOC2Q8NI27 1593 aaKnown RBP13.12□□□□□ -0.31
LGMN-205ENST00000553918 PDS5BQ9NTI5 1447 aa13.08□□□□□ -0.32
LGMN-205ENST00000553918 LAMC3Q9Y6N6 1575 aa13.07□□□□□ -0.32
LGMN-205ENST00000553918 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
LGMN-205ENST00000553918 PEG3Q9GZU2 1588 aa13.04□□□□□ -0.32
LGMN-205ENST00000553918 CADPSQ9ULU8 1353 aa13.01□□□□□ -0.33
LGMN-205ENST00000553918 MROH2BQ7Z745 1585 aa12.97□□□□□ -0.33
LGMN-205ENST00000553918 MRC2Q9UBG0 1479 aa12.96□□□□□ -0.34
LGMN-205ENST00000553918 KIF21AQ7Z4S6 1674 aa12.96□□□□□ -0.34
LGMN-205ENST00000553918 OSCARQ8IYS5 282 aa12.93□□□□□ -0.34
LGMN-205ENST00000553918 WDR62O43379 1518 aa12.92□□□□□ -0.34
LGMN-205ENST00000553918 CEP164Q9UPV0 1460 aa12.84□□□□□ -0.35
LGMN-205ENST00000553918 FANCD2Q9BXW9 1451 aa12.81□□□□□ -0.36
LGMN-205ENST00000553918 CFTRP13569 1480 aa12.77□□□□□ -0.37
LGMN-205ENST00000553918 WIZO95785 1651 aa12.73□□□□□ -0.37
LGMN-205ENST00000553918 URB2Q14146 1524 aaKnown RBP12.72□□□□□ -0.37
LGMN-205ENST00000553918 RIMBP3CA6NJZ7 1639 aa12.66□□□□□ -0.38
LGMN-205ENST00000553918 RIMBP3BA6NNM3 1639 aa12.66□□□□□ -0.38
LGMN-205ENST00000553918 RIMBP3Q9UFD9 1639 aa12.66□□□□□ -0.38
LGMN-205ENST00000553918 CYB5RLQ6IPT4 315 aa12.65□□□□□ -0.38
LGMN-205ENST00000553918 ARHGEF11O15085 1522 aa12.64□□□□□ -0.39
LGMN-205ENST00000553918 RSF1Q96T23 1441 aaPredicted RBP12.63□□□□□ -0.39
LGMN-205ENST00000553918 ZNF608Q9ULD9 1512 aaPredicted RBP12.63□□□□□ -0.39
LGMN-205ENST00000553918 IFT140Q96RY7 1462 aa12.61□□□□□ -0.39
LGMN-205ENST00000553918 TRHP20396 242 aaPredicted RBP12.59□□□□□ -0.39
LGMN-205ENST00000553918 TOP2AP11388 1531 aaKnown RBP12.57□□□□□ -0.4
LGMN-205ENST00000553918 TOPBP1Q92547 1522 aa12.52□□□□□ -0.4
LGMN-205ENST00000553918 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
LGMN-205ENST00000553918 CCDC88BA6NC98 1476 aa12.5□□□□□ -0.41
LGMN-205ENST00000553918 AQRO60306 1485 aaKnown RBP eCLIP12.5□□□□□ -0.41
LGMN-205ENST00000553918 FBLN2P98095 1184 aa12.49□□□□□ -0.41
LGMN-205ENST00000553918 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
LGMN-205ENST00000553918 EIF4G3O43432 1585 aaKnown RBP12.45□□□□□ -0.42
LGMN-205ENST00000553918 AEBP2Q6ZN18 517 aaPredicted RBP12.44□□□□□ -0.42
LGMN-205ENST00000553918 DNMBPQ6XZF7 1577 aa12.41□□□□□ -0.42
LGMN-205ENST00000553918 TDRD9Q8NDG6 1382 aaKnown RBP12.4□□□□□ -0.42
LGMN-205ENST00000553918 TARBP1Q13395 1621 aaKnown RBP12.4□□□□□ -0.42
LGMN-205ENST00000553918 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
LGMN-205ENST00000553918 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
LGMN-205ENST00000553918 SOGA1O94964 1423 aa12.37□□□□□ -0.43
LGMN-205ENST00000553918 RAD54L2Q9Y4B4 1467 aa12.36□□□□□ -0.43
LGMN-205ENST00000553918 CHMP7Q8WUX9 453 aaPredicted RBP12.36□□□□□ -0.43
LGMN-205ENST00000553918 CHD1O14646 1710 aa12.36□□□□□ -0.43
LGMN-205ENST00000553918 SNAPC4Q5SXM2 1469 aa12.33□□□□□ -0.44
LGMN-205ENST00000553918 CLASP1Q7Z460 1538 aa12.32□□□□□ -0.44
LGMN-205ENST00000553918 MAGI1Q96QZ7 1491 aaPredicted RBP12.27□□□□□ -0.45
LGMN-205ENST00000553918 GRIN2BQ13224 1484 aa12.26□□□□□ -0.45
LGMN-205ENST00000553918 FGD5Q6ZNL6 1462 aa12.26□□□□□ -0.45
LGMN-205ENST00000553918 SYNJ1O43426 1573 aa12.26□□□□□ -0.45
LGMN-205ENST00000553918 SYNJ2O15056 1496 aa12.25□□□□□ -0.45
LGMN-205ENST00000553918 GAPVD1Q14C86 1478 aa12.25□□□□□ -0.45
LGMN-205ENST00000553918 WDR97A6NE52 1622 aa12.22□□□□□ -0.45
LGMN-205ENST00000553918 CUX1P39880 1505 aa12.19□□□□□ -0.46
LGMN-205ENST00000553918 ERCC6L2Q5T890 1561 aa12.12□□□□□ -0.47
LGMN-205ENST00000553918 ABCA10Q8WWZ4 1543 aa12.11□□□□□ -0.47
LGMN-205ENST00000553918 GRIN2AQ12879 1464 aa12.09□□□□□ -0.47
LGMN-205ENST00000553918 NUP160Q12769 1436 aa12.09□□□□□ -0.47
LGMN-205ENST00000553918 CEP170Q5SW79 1584 aa12.05□□□□□ -0.48
LGMN-205ENST00000553918 ABCA5Q8WWZ7 1642 aa12.04□□□□□ -0.48
LGMN-205ENST00000553918 FAM69CQ0P6D2 419 aa12.03□□□□□ -0.48
LGMN-205ENST00000553918 PBRM1Q86U86 1689 aa12.03□□□□□ -0.48
LGMN-205ENST00000553918 JPH4Q96JJ6 628 aa12.02□□□□□ -0.49
LGMN-205ENST00000553918 FHAD1B1AJZ9 1412 aa12.02□□□□□ -0.49
LGMN-205ENST00000553918 WRNQ14191 1432 aaPredicted RBP eCLIP12.02□□□□□ -0.49
LGMN-205ENST00000553918 KDM4FA0A1W2PPD8 638 aa12.01□□□□□ -0.49
LGMN-205ENST00000553918 PRG4Q92954 1404 aaPredicted RBP12□□□□□ -0.49
LGMN-205ENST00000553918 SHROOM2Q13796 1616 aa11.98□□□□□ -0.49
LGMN-205ENST00000553918 ADAMTS12P58397 1594 aa11.98□□□□□ -0.49
LGMN-205ENST00000553918 ABCC10Q5T3U5 1492 aa11.98□□□□□ -0.49
LGMN-205ENST00000553918 NPM1P06748 294 aaKnown RBP eCLIP11.98□□□□□ -0.49
LGMN-205ENST00000553918 ILDR1Q86SU0 546 aaPredicted RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms