RNA–Protein interactions for RNA: ENST00000514455.5

RACK1-233, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2 BASIC

Gene RACK1, Length 791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-233ENST00000514455 NISCHQ9Y2I1 1504 aa23.38■■□□□ 1.33
RACK1-233ENST00000514455 AEBP2Q6ZN18 517 aaPredicted RBP21.05■□□□□ 0.96
RACK1-233ENST00000514455 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
RACK1-233ENST00000514455 ABCC9O60706 1549 aa20.02■□□□□ 0.79
RACK1-233ENST00000514455 CHIC1Q5VXU3 224 aa19.67■□□□□ 0.74
RACK1-233ENST00000514455 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
RACK1-233ENST00000514455 ZCCHC6Q5VYS8 1495 aaKnown RBP19.5■□□□□ 0.71
RACK1-233ENST00000514455 NACADO15069 1562 aa19.38■□□□□ 0.69
RACK1-233ENST00000514455 DCAF1Q9Y4B6 1507 aa19.34■□□□□ 0.69
RACK1-233ENST00000514455 RB1CC1Q8TDY2 1594 aa19.33■□□□□ 0.69
RACK1-233ENST00000514455 MYO15BQ96JP2 1530 aa19.33■□□□□ 0.68
RACK1-233ENST00000514455 SCRIBQ14160 1630 aa18.86■□□□□ 0.61
RACK1-233ENST00000514455 UNC13AQ9UPW8 1703 aa18.84■□□□□ 0.61
RACK1-233ENST00000514455 PABPN1Q86U42 306 aaKnown RBP eCLIP18.82■□□□□ 0.6
RACK1-233ENST00000514455 BICRAQ9NZM4 1560 aa18.72■□□□□ 0.59
RACK1-233ENST00000514455 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
RACK1-233ENST00000514455 CECR2Q9BXF3 1484 aa18.21■□□□□ 0.51
RACK1-233ENST00000514455 DNAJC5BQ9UF47 199 aa18.21■□□□□ 0.51
RACK1-233ENST00000514455 EIF4G1Q04637 1599 aaKnown RBP18.21■□□□□ 0.51
RACK1-233ENST00000514455 BAZ1AQ9NRL2 1556 aaPredicted RBP18.1■□□□□ 0.49
RACK1-233ENST00000514455 CC2D2AQ9P2K1 1620 aa18.09■□□□□ 0.49
RACK1-233ENST00000514455 SMARCA4P51532 1647 aa18.06■□□□□ 0.48
RACK1-233ENST00000514455 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
RACK1-233ENST00000514455 SENP3Q9H4L4 574 aaPredicted RBP17.99■□□□□ 0.47
RACK1-233ENST00000514455 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
RACK1-233ENST00000514455 RSF1Q96T23 1441 aaPredicted RBP17.94■□□□□ 0.46
RACK1-233ENST00000514455 SMARCA2P51531 1590 aa17.91■□□□□ 0.46
RACK1-233ENST00000514455 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
RACK1-233ENST00000514455 PEG3Q9GZU2 1588 aa17.87■□□□□ 0.45
RACK1-233ENST00000514455 WIZO95785 1651 aa17.83■□□□□ 0.45
RACK1-233ENST00000514455 BAZ1BQ9UIG0 1483 aaKnown RBP17.8■□□□□ 0.44
RACK1-233ENST00000514455 HMGXB3Q12766 1538 aa17.78■□□□□ 0.44
RACK1-233ENST00000514455 SUPT5HO00267 1087 aaKnown RBP17.77■□□□□ 0.44
RACK1-233ENST00000514455 PHF23Q9BUL5 403 aaPredicted RBP17.7■□□□□ 0.42
RACK1-233ENST00000514455 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
RACK1-233ENST00000514455 CCDC88BA6NC98 1476 aa17.5■□□□□ 0.39
RACK1-233ENST00000514455 CADPSQ9ULU8 1353 aa17.42■□□□□ 0.38
RACK1-233ENST00000514455 NESP48681 1621 aa17.39■□□□□ 0.37
RACK1-233ENST00000514455 LAMC3Q9Y6N6 1575 aa17.35■□□□□ 0.37
RACK1-233ENST00000514455 CFTRP13569 1480 aa17.34■□□□□ 0.37
RACK1-233ENST00000514455 PDS5BQ9NTI5 1447 aa17.29■□□□□ 0.36
RACK1-233ENST00000514455 ERCC6Q03468 1493 aa17.24■□□□□ 0.35
RACK1-233ENST00000514455 FANCD2Q9BXW9 1451 aa17.19■□□□□ 0.34
RACK1-233ENST00000514455 PRDM2Q13029 1718 aa17.13■□□□□ 0.33
RACK1-233ENST00000514455 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
RACK1-233ENST00000514455 CEP164Q9UPV0 1460 aa17.12■□□□□ 0.33
RACK1-233ENST00000514455 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
RACK1-233ENST00000514455 THOC2Q8NI27 1593 aaKnown RBP16.99■□□□□ 0.31
RACK1-233ENST00000514455 URB2Q14146 1524 aaKnown RBP16.98■□□□□ 0.31
RACK1-233ENST00000514455 ABCC8Q09428 1581 aa16.98■□□□□ 0.31
RACK1-233ENST00000514455 WDR62O43379 1518 aa16.96■□□□□ 0.3
RACK1-233ENST00000514455 TOPBP1Q92547 1522 aa16.94■□□□□ 0.3
RACK1-233ENST00000514455 CUX2O14529 1486 aa16.93■□□□□ 0.3
RACK1-233ENST00000514455 DNMBPQ6XZF7 1577 aa16.91■□□□□ 0.3
RACK1-233ENST00000514455 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
RACK1-233ENST00000514455 CUX1P39880 1505 aa16.89■□□□□ 0.29
RACK1-233ENST00000514455 FOXD1Q16676 465 aa16.81■□□□□ 0.28
RACK1-233ENST00000514455 POLA1P09884 1462 aaPredicted RBP16.8■□□□□ 0.28
RACK1-233ENST00000514455 FGD5Q6ZNL6 1462 aa16.8■□□□□ 0.28
RACK1-233ENST00000514455 SOGA1O94964 1423 aa16.79■□□□□ 0.28
RACK1-233ENST00000514455 TOP2BQ02880 1626 aa16.79■□□□□ 0.28
RACK1-233ENST00000514455 SYNJ1O43426 1573 aa16.79■□□□□ 0.28
RACK1-233ENST00000514455 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
RACK1-233ENST00000514455 TRIM41Q8WV44 630 aa16.77■□□□□ 0.28
RACK1-233ENST00000514455 BIVM-ERCC5R4GMW8 1640 aa16.77■□□□□ 0.27
RACK1-233ENST00000514455 RAD54L2Q9Y4B4 1467 aa16.76■□□□□ 0.27
RACK1-233ENST00000514455 TARBP1Q13395 1621 aaKnown RBP16.7■□□□□ 0.26
RACK1-233ENST00000514455 TDRD9Q8NDG6 1382 aaKnown RBP16.67■□□□□ 0.26
RACK1-233ENST00000514455 ZNF608Q9ULD9 1512 aaPredicted RBP16.67■□□□□ 0.26
RACK1-233ENST00000514455 ABCA10Q8WWZ4 1543 aa16.65■□□□□ 0.26
RACK1-233ENST00000514455 AQRO60306 1485 aaKnown RBP eCLIP16.64■□□□□ 0.256e-10■■■■■ 34.9
RACK1-233ENST00000514455 DNAJC5Q9H3Z4 198 aa16.61■□□□□ 0.25
RACK1-233ENST00000514455 GAPVD1Q14C86 1478 aa16.58■□□□□ 0.24
RACK1-233ENST00000514455 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
RACK1-233ENST00000514455 EIF4G3O43432 1585 aaKnown RBP16.55■□□□□ 0.24
RACK1-233ENST00000514455 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
RACK1-233ENST00000514455 GRIN2BQ13224 1484 aa16.54■□□□□ 0.24
RACK1-233ENST00000514455 ABCA5Q8WWZ7 1642 aa16.51■□□□□ 0.23
RACK1-233ENST00000514455 IGF1RP08069 1367 aa16.49■□□□□ 0.23
RACK1-233ENST00000514455 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
RACK1-233ENST00000514455 FBLN2P98095 1184 aa16.47■□□□□ 0.23
RACK1-233ENST00000514455 CHMP7Q8WUX9 453 aaPredicted RBP16.45■□□□□ 0.22
RACK1-233ENST00000514455 SNAPC4Q5SXM2 1469 aa16.45■□□□□ 0.22
RACK1-233ENST00000514455 ERICH3Q5RHP9 1530 aa16.45■□□□□ 0.22
RACK1-233ENST00000514455 PBRM1Q86U86 1689 aa16.44■□□□□ 0.22
RACK1-233ENST00000514455 MAGI1Q96QZ7 1491 aaPredicted RBP16.44■□□□□ 0.22
RACK1-233ENST00000514455 FAM9AQ8IZU1 332 aaPredicted RBP16.42■□□□□ 0.22
RACK1-233ENST00000514455 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
RACK1-233ENST00000514455 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
RACK1-233ENST00000514455 OSCARQ8IYS5 282 aa16.4■□□□□ 0.22
RACK1-233ENST00000514455 CARMIL1Q5VZK9 1371 aa16.39■□□□□ 0.21
RACK1-233ENST00000514455 EEA1Q15075 1411 aa16.39■□□□□ 0.21
RACK1-233ENST00000514455 SYNJ2O15056 1496 aa16.38■□□□□ 0.21
RACK1-233ENST00000514455 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
RACK1-233ENST00000514455 CUL7Q14999 1698 aa16.31■□□□□ 0.2
RACK1-233ENST00000514455 CHD1O14646 1710 aa16.31■□□□□ 0.2
RACK1-233ENST00000514455 GRIN2AQ12879 1464 aa16.3■□□□□ 0.2
RACK1-233ENST00000514455 RAPGEF2Q9Y4G8 1499 aa16.29■□□□□ 0.2
RACK1-233ENST00000514455 PRXQ9BXM0 1461 aa16.27■□□□□ 0.19
RACK1-233ENST00000514455 NUP160Q12769 1436 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms