RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 AEBP2Q6ZN18 517 aaPredicted RBP29.9■■■□□ 2.38
SNU13-208ENST00000488571 NISCHQ9Y2I1 1504 aa28.87■■■□□ 2.21
SNU13-208ENST00000488571 CHIC1Q5VXU3 224 aa28.51■■■□□ 2.15
SNU13-208ENST00000488571 ABCC9O60706 1549 aa26.11■■□□□ 1.77
SNU13-208ENST00000488571 CCDC180Q9P1Z9 1646 aa25.99■■□□□ 1.75
SNU13-208ENST00000488571 SENP3Q9H4L4 574 aaPredicted RBP25.49■■□□□ 1.67
SNU13-208ENST00000488571 PHF23Q9BUL5 403 aaPredicted RBP25.2■■□□□ 1.62
SNU13-208ENST00000488571 RB1CC1Q8TDY2 1594 aa24.78■■□□□ 1.56
SNU13-208ENST00000488571 DNAJC5BQ9UF47 199 aa24.65■■□□□ 1.54
SNU13-208ENST00000488571 NACADO15069 1562 aa24.58■■□□□ 1.52
SNU13-208ENST00000488571 DCAF8L2P0C7V8 631 aa24.34■■□□□ 1.49
SNU13-208ENST00000488571 UNC13AQ9UPW8 1703 aa24.28■■□□□ 1.48
SNU13-208ENST00000488571 PABPN1Q86U42 306 aaKnown RBP eCLIP24.26■■□□□ 1.47
SNU13-208ENST00000488571 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.47
SNU13-208ENST00000488571 BICRAQ9NZM4 1560 aa24.12■■□□□ 1.45
SNU13-208ENST00000488571 ZCCHC6Q5VYS8 1495 aaKnown RBP23.91■■□□□ 1.42
SNU13-208ENST00000488571 DCAF1Q9Y4B6 1507 aa23.84■■□□□ 1.41
SNU13-208ENST00000488571 FOXD1Q16676 465 aa23.75■■□□□ 1.39
SNU13-208ENST00000488571 SHROOM4Q9ULL8 1493 aa23.73■■□□□ 1.39
SNU13-208ENST00000488571 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
SNU13-208ENST00000488571 CC2D2AQ9P2K1 1620 aa23.59■■□□□ 1.37
SNU13-208ENST00000488571 CECR2Q9BXF3 1484 aa23.53■■□□□ 1.36
SNU13-208ENST00000488571 EIF4G1Q04637 1599 aaKnown RBP23.51■■□□□ 1.35
SNU13-208ENST00000488571 PLPPR3Q6T4P5 718 aa22.84■■□□□ 1.25
SNU13-208ENST00000488571 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
SNU13-208ENST00000488571 NCAPD3P42695 1498 aa22.7■■□□□ 1.22
SNU13-208ENST00000488571 ATAD2BQ9ULI0 1458 aa22.61■■□□□ 1.21
SNU13-208ENST00000488571 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
SNU13-208ENST00000488571 CUX2O14529 1486 aa22.56■■□□□ 1.2
SNU13-208ENST00000488571 HMGXB3Q12766 1538 aa22.53■■□□□ 1.2
SNU13-208ENST00000488571 SMARCA2P51531 1590 aa22.53■■□□□ 1.2
SNU13-208ENST00000488571 ERCC6Q03468 1493 aa22.52■■□□□ 1.2
SNU13-208ENST00000488571 NESP48681 1621 aa22.41■■□□□ 1.18
SNU13-208ENST00000488571 BAZ1AQ9NRL2 1556 aaPredicted RBP22.4■■□□□ 1.18
SNU13-208ENST00000488571 BAZ1BQ9UIG0 1483 aaKnown RBP22.36■■□□□ 1.17
SNU13-208ENST00000488571 PEG3Q9GZU2 1588 aa22.36■■□□□ 1.17
SNU13-208ENST00000488571 PPP6R1Q9UPN7 881 aa22.3■■□□□ 1.16
SNU13-208ENST00000488571 MROH2BQ7Z745 1585 aa22.25■■□□□ 1.15
SNU13-208ENST00000488571 ADRA2BP18089 450 aa22.23■■□□□ 1.15
SNU13-208ENST00000488571 THOC2Q8NI27 1593 aaKnown RBP22.23■■□□□ 1.15
SNU13-208ENST00000488571 PIAS4Q8N2W9 510 aaPredicted RBP22.21■■□□□ 1.15
SNU13-208ENST00000488571 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
SNU13-208ENST00000488571 MSH5O43196 834 aa22.18■■□□□ 1.14
SNU13-208ENST00000488571 KIF21AQ7Z4S6 1674 aa22.13■■□□□ 1.13
SNU13-208ENST00000488571 PDS5BQ9NTI5 1447 aa22.05■■□□□ 1.12
SNU13-208ENST00000488571 WIZO95785 1651 aa21.98■■□□□ 1.11
SNU13-208ENST00000488571 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
SNU13-208ENST00000488571 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
SNU13-208ENST00000488571 WDR62O43379 1518 aa21.87■■□□□ 1.09
SNU13-208ENST00000488571 CEP164Q9UPV0 1460 aa21.77■■□□□ 1.07
SNU13-208ENST00000488571 FANCD2Q9BXW9 1451 aa21.74■■□□□ 1.07
SNU13-208ENST00000488571 RSF1Q96T23 1441 aaPredicted RBP21.72■■□□□ 1.07
SNU13-208ENST00000488571 CFTRP13569 1480 aa21.72■■□□□ 1.07
SNU13-208ENST00000488571 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
SNU13-208ENST00000488571 TRIM41Q8WV44 630 aa21.61■■□□□ 1.05
SNU13-208ENST00000488571 URB2Q14146 1524 aaKnown RBP21.6■■□□□ 1.05
SNU13-208ENST00000488571 PRDM2Q13029 1718 aa21.52■■□□□ 1.03
SNU13-208ENST00000488571 OSCARQ8IYS5 282 aa21.46■■□□□ 1.03
SNU13-208ENST00000488571 POTEDQ86YR6 584 aa21.45■■□□□ 1.02
SNU13-208ENST00000488571 CCDC88BA6NC98 1476 aa21.44■■□□□ 1.02
SNU13-208ENST00000488571 ZNF608Q9ULD9 1512 aaPredicted RBP21.35■■□□□ 1.01
SNU13-208ENST00000488571 IFT140Q96RY7 1462 aa21.34■■□□□ 1.01
SNU13-208ENST00000488571 TOPBP1Q92547 1522 aa21.33■■□□□ 1
SNU13-208ENST00000488571 RIMBP3CA6NJZ7 1639 aa21.26■□□□□ 0.99
SNU13-208ENST00000488571 RIMBP3BA6NNM3 1639 aa21.26■□□□□ 0.99
SNU13-208ENST00000488571 RIMBP3Q9UFD9 1639 aa21.26■□□□□ 0.99
SNU13-208ENST00000488571 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
SNU13-208ENST00000488571 ABCC8Q09428 1581 aa21.23■□□□□ 0.99
SNU13-208ENST00000488571 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
SNU13-208ENST00000488571 TARBP1Q13395 1621 aaKnown RBP21.18■□□□□ 0.98
SNU13-208ENST00000488571 ARHGEF11O15085 1522 aa21.17■□□□□ 0.98
SNU13-208ENST00000488571 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.97
SNU13-208ENST00000488571 CHD1O14646 1710 aa21.11■□□□□ 0.97
SNU13-208ENST00000488571 POLA1P09884 1462 aaPredicted RBP21.11■□□□□ 0.97
SNU13-208ENST00000488571 RAD54L2Q9Y4B4 1467 aa21.02■□□□□ 0.96
SNU13-208ENST00000488571 CYB5RLQ6IPT4 315 aa20.97■□□□□ 0.95
SNU13-208ENST00000488571 SOGA1O94964 1423 aa20.96■□□□□ 0.95
SNU13-208ENST00000488571 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
SNU13-208ENST00000488571 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
SNU13-208ENST00000488571 FBLN2P98095 1184 aa20.95■□□□□ 0.94
SNU13-208ENST00000488571 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
SNU13-208ENST00000488571 CUX1P39880 1505 aa20.92■□□□□ 0.94
SNU13-208ENST00000488571 WDR97A6NE52 1622 aa20.92■□□□□ 0.94
SNU13-208ENST00000488571 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
SNU13-208ENST00000488571 CLASP1Q7Z460 1538 aa20.87■□□□□ 0.93
SNU13-208ENST00000488571 MAGI1Q96QZ7 1491 aaPredicted RBP20.83■□□□□ 0.93
SNU13-208ENST00000488571 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
SNU13-208ENST00000488571 SYNJ1O43426 1573 aa20.8■□□□□ 0.92
SNU13-208ENST00000488571 CHMP7Q8WUX9 453 aaPredicted RBP20.78■□□□□ 0.92
SNU13-208ENST00000488571 SYNJ2O15056 1496 aa20.77■□□□□ 0.92
SNU13-208ENST00000488571 TRHP20396 242 aaPredicted RBP20.76■□□□□ 0.91
SNU13-208ENST00000488571 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
SNU13-208ENST00000488571 GAPVD1Q14C86 1478 aa20.72■□□□□ 0.91
SNU13-208ENST00000488571 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
SNU13-208ENST00000488571 ABCA10Q8WWZ4 1543 aa20.7■□□□□ 0.9
SNU13-208ENST00000488571 SUPT5HO00267 1087 aaKnown RBP20.59■□□□□ 0.89
SNU13-208ENST00000488571 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
SNU13-208ENST00000488571 WRNQ14191 1432 aaPredicted RBP eCLIP20.55■□□□□ 0.88
SNU13-208ENST00000488571 BIVM-ERCC5R4GMW8 1640 aa20.55■□□□□ 0.88
SNU13-208ENST00000488571 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms