RNA–Protein interactions for RNA: ENST00000469028.1

SNU13-206, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 736 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-206ENST00000469028 NISCHQ9Y2I1 1504 aa26.77■■□□□ 1.88
SNU13-206ENST00000469028 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
SNU13-206ENST00000469028 ABCC9O60706 1549 aa23.23■■□□□ 1.31
SNU13-206ENST00000469028 ZCCHC6Q5VYS8 1495 aaKnown RBP22.33■■□□□ 1.16
SNU13-206ENST00000469028 RB1CC1Q8TDY2 1594 aa22.33■■□□□ 1.16
SNU13-206ENST00000469028 NACADO15069 1562 aa22.32■■□□□ 1.16
SNU13-206ENST00000469028 DCAF8L2P0C7V8 631 aa22.28■■□□□ 1.16
SNU13-206ENST00000469028 MYO15BQ96JP2 1530 aa22.21■■□□□ 1.15
SNU13-206ENST00000469028 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
SNU13-206ENST00000469028 UNC13AQ9UPW8 1703 aa21.87■■□□□ 1.09
SNU13-206ENST00000469028 SCRIBQ14160 1630 aa21.72■■□□□ 1.07
SNU13-206ENST00000469028 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
SNU13-206ENST00000469028 PABPN1Q86U42 306 aaKnown RBP eCLIP21.7■■□□□ 1.06
SNU13-206ENST00000469028 SHROOM4Q9ULL8 1493 aa21.43■■□□□ 1.02
SNU13-206ENST00000469028 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
SNU13-206ENST00000469028 EIF4G1Q04637 1599 aaKnown RBP21.11■□□□□ 0.97
SNU13-206ENST00000469028 CC2D2AQ9P2K1 1620 aa21.01■□□□□ 0.95
SNU13-206ENST00000469028 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
SNU13-206ENST00000469028 SMARCA4P51532 1647 aa20.77■□□□□ 0.92
SNU13-206ENST00000469028 BAZ1AQ9NRL2 1556 aaPredicted RBP20.73■□□□□ 0.91
SNU13-206ENST00000469028 MROH2BQ7Z745 1585 aa20.65■□□□□ 0.9
SNU13-206ENST00000469028 ATAD2BQ9ULI0 1458 aa20.64■□□□□ 0.89
SNU13-206ENST00000469028 NCAPD3P42695 1498 aa20.61■□□□□ 0.89
SNU13-206ENST00000469028 SMARCA2P51531 1590 aa20.59■□□□□ 0.89
SNU13-206ENST00000469028 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
SNU13-206ENST00000469028 HMGXB3Q12766 1538 aa20.52■□□□□ 0.87
SNU13-206ENST00000469028 BAZ1BQ9UIG0 1483 aaKnown RBP20.45■□□□□ 0.86
SNU13-206ENST00000469028 WIZO95785 1651 aa20.43■□□□□ 0.86
SNU13-206ENST00000469028 RSF1Q96T23 1441 aaPredicted RBP20.42■□□□□ 0.86
SNU13-206ENST00000469028 TOP2AP11388 1531 aaKnown RBP20.21■□□□□ 0.83
SNU13-206ENST00000469028 NESP48681 1621 aa20.13■□□□□ 0.81
SNU13-206ENST00000469028 LAMC3Q9Y6N6 1575 aa20.05■□□□□ 0.8
SNU13-206ENST00000469028 CADPSQ9ULU8 1353 aa20■□□□□ 0.79
SNU13-206ENST00000469028 ERCC6Q03468 1493 aa19.98■□□□□ 0.79
SNU13-206ENST00000469028 CCDC88BA6NC98 1476 aa19.97■□□□□ 0.79
SNU13-206ENST00000469028 CFTRP13569 1480 aa19.91■□□□□ 0.78
SNU13-206ENST00000469028 SUPT5HO00267 1087 aaKnown RBP19.9■□□□□ 0.78
SNU13-206ENST00000469028 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
SNU13-206ENST00000469028 KIF21AQ7Z4S6 1674 aa19.88■□□□□ 0.77
SNU13-206ENST00000469028 THOC2Q8NI27 1593 aaKnown RBP19.83■□□□□ 0.76
SNU13-206ENST00000469028 FANCD2Q9BXW9 1451 aa19.79■□□□□ 0.76
SNU13-206ENST00000469028 CUX2O14529 1486 aa19.76■□□□□ 0.75
SNU13-206ENST00000469028 PRDM2Q13029 1718 aa19.75■□□□□ 0.75
SNU13-206ENST00000469028 CEP164Q9UPV0 1460 aa19.74■□□□□ 0.75
SNU13-206ENST00000469028 MRC2Q9UBG0 1479 aa19.72■□□□□ 0.75
SNU13-206ENST00000469028 WDR62O43379 1518 aa19.66■□□□□ 0.74
SNU13-206ENST00000469028 URB2Q14146 1524 aaKnown RBP19.61■□□□□ 0.73
SNU13-206ENST00000469028 TOPBP1Q92547 1522 aa19.48■□□□□ 0.71
SNU13-206ENST00000469028 DNMBPQ6XZF7 1577 aa19.46■□□□□ 0.71
SNU13-206ENST00000469028 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
SNU13-206ENST00000469028 CUX1P39880 1505 aa19.37■□□□□ 0.69
SNU13-206ENST00000469028 IFT140Q96RY7 1462 aa19.34■□□□□ 0.69
SNU13-206ENST00000469028 POLA1P09884 1462 aaPredicted RBP19.33■□□□□ 0.68
SNU13-206ENST00000469028 FGD5Q6ZNL6 1462 aa19.28■□□□□ 0.68
SNU13-206ENST00000469028 ZNF608Q9ULD9 1512 aaPredicted RBP19.28■□□□□ 0.68
SNU13-206ENST00000469028 TARBP1Q13395 1621 aaKnown RBP19.28■□□□□ 0.68
SNU13-206ENST00000469028 RAD54L2Q9Y4B4 1467 aa19.25■□□□□ 0.67
SNU13-206ENST00000469028 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
SNU13-206ENST00000469028 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
SNU13-206ENST00000469028 SOGA1O94964 1423 aa19.22■□□□□ 0.67
SNU13-206ENST00000469028 BIVM-ERCC5R4GMW8 1640 aa19.21■□□□□ 0.67
SNU13-206ENST00000469028 TOP2BQ02880 1626 aa19.2■□□□□ 0.66
SNU13-206ENST00000469028 EIF4G3O43432 1585 aaKnown RBP19.19■□□□□ 0.66
SNU13-206ENST00000469028 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.661e-20■■■■■ 27.6
SNU13-206ENST00000469028 WDR97A6NE52 1622 aa19.14■□□□□ 0.66
SNU13-206ENST00000469028 TDRD9Q8NDG6 1382 aaKnown RBP19.12■□□□□ 0.65
SNU13-206ENST00000469028 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
SNU13-206ENST00000469028 DNAJC5Q9H3Z4 198 aa19.09■□□□□ 0.65
SNU13-206ENST00000469028 ABCA5Q8WWZ7 1642 aa19.03■□□□□ 0.64
SNU13-206ENST00000469028 GAPVD1Q14C86 1478 aa19■□□□□ 0.63
SNU13-206ENST00000469028 GRIN2BQ13224 1484 aa18.99■□□□□ 0.63
SNU13-206ENST00000469028 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
SNU13-206ENST00000469028 PBRM1Q86U86 1689 aa18.98■□□□□ 0.63
SNU13-206ENST00000469028 MAGI1Q96QZ7 1491 aaPredicted RBP18.94■□□□□ 0.62
SNU13-206ENST00000469028 CHD1O14646 1710 aa18.94■□□□□ 0.62
SNU13-206ENST00000469028 OSCARQ8IYS5 282 aa18.91■□□□□ 0.62
SNU13-206ENST00000469028 SYNJ2O15056 1496 aa18.87■□□□□ 0.61
SNU13-206ENST00000469028 FBLN2P98095 1184 aa18.86■□□□□ 0.61
SNU13-206ENST00000469028 ERICH3Q5RHP9 1530 aa18.85■□□□□ 0.61
SNU13-206ENST00000469028 ADAMTS12P58397 1594 aa18.85■□□□□ 0.61
SNU13-206ENST00000469028 CHMP7Q8WUX9 453 aaPredicted RBP18.81■□□□□ 0.6
SNU13-206ENST00000469028 KIF27Q86VH2 1401 aa18.81■□□□□ 0.6
SNU13-206ENST00000469028 FHAD1B1AJZ9 1412 aa18.78■□□□□ 0.6
SNU13-206ENST00000469028 TRIM41Q8WV44 630 aa18.77■□□□□ 0.6
SNU13-206ENST00000469028 GRIN2AQ12879 1464 aa18.76■□□□□ 0.59
SNU13-206ENST00000469028 CLASP1Q7Z460 1538 aa18.75■□□□□ 0.59
SNU13-206ENST00000469028 IGF1RP08069 1367 aa18.75■□□□□ 0.59
SNU13-206ENST00000469028 RUSC2Q8N2Y8 1516 aa18.72■□□□□ 0.59
SNU13-206ENST00000469028 CEP170Q5SW79 1584 aa18.7■□□□□ 0.58
SNU13-206ENST00000469028 CUL7Q14999 1698 aa18.69■□□□□ 0.58
SNU13-206ENST00000469028 NUP160Q12769 1436 aa18.68■□□□□ 0.58
SNU13-206ENST00000469028 ARHGEF11O15085 1522 aa18.67■□□□□ 0.58
SNU13-206ENST00000469028 RIMBP3CA6NJZ7 1639 aa18.67■□□□□ 0.58
SNU13-206ENST00000469028 RIMBP3BA6NNM3 1639 aa18.67■□□□□ 0.58
SNU13-206ENST00000469028 RIMBP3Q9UFD9 1639 aa18.67■□□□□ 0.58
SNU13-206ENST00000469028 CHIC1Q5VXU3 224 aa18.62■□□□□ 0.57
SNU13-206ENST00000469028 CARMIL1Q5VZK9 1371 aa18.62■□□□□ 0.57
SNU13-206ENST00000469028 ARAP1Q96P48 1450 aa18.54■□□□□ 0.56
SNU13-206ENST00000469028 SHROOM2Q13796 1616 aa18.54■□□□□ 0.56
SNU13-206ENST00000469028 RAPGEF2Q9Y4G8 1499 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms