RNA–Protein interactions for RNA: ENST00000549282.5

ERBB3-209, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 4

Gene ERBB3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-209ENST00000549282 NISCHQ9Y2I1 1504 aa36.73■■■■□ 3.47
ERBB3-209ENST00000549282 ABCC9O60706 1549 aa33.58■■■□□ 2.97
ERBB3-209ENST00000549282 CCDC180Q9P1Z9 1646 aa33.07■■■□□ 2.88
ERBB3-209ENST00000549282 DNAJC5BQ9UF47 199 aa31.99■■■□□ 2.71
ERBB3-209ENST00000549282 RB1CC1Q8TDY2 1594 aa31.73■■■□□ 2.67
ERBB3-209ENST00000549282 NACADO15069 1562 aa31.42■■■□□ 2.62
ERBB3-209ENST00000549282 DCAF8L2P0C7V8 631 aa31.32■■■□□ 2.6
ERBB3-209ENST00000549282 PABPN1Q86U42 306 aaKnown RBP eCLIP31.27■■■□□ 2.6
ERBB3-209ENST00000549282 UNC13AQ9UPW8 1703 aa31.01■■■□□ 2.55
ERBB3-209ENST00000549282 BICRAQ9NZM4 1560 aa30.84■■■□□ 2.53
ERBB3-209ENST00000549282 MYO15BQ96JP2 1530 aa30.83■■■□□ 2.53
ERBB3-209ENST00000549282 SHROOM4Q9ULL8 1493 aa30.32■■■□□ 2.44
ERBB3-209ENST00000549282 ZCCHC6Q5VYS8 1495 aaKnown RBP30.31■■■□□ 2.44
ERBB3-209ENST00000549282 CECR2Q9BXF3 1484 aa30.3■■■□□ 2.44
ERBB3-209ENST00000549282 CC2D2AQ9P2K1 1620 aa30.29■■■□□ 2.44
ERBB3-209ENST00000549282 DCAF1Q9Y4B6 1507 aa30.28■■■□□ 2.44
ERBB3-209ENST00000549282 SCRIBQ14160 1630 aa30.14■■■□□ 2.41
ERBB3-209ENST00000549282 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
ERBB3-209ENST00000549282 DNAJC5Q9H3Z4 198 aa29.68■■■□□ 2.34
ERBB3-209ENST00000549282 CUX2O14529 1486 aa29.09■■■□□ 2.25
ERBB3-209ENST00000549282 NCAPD3P42695 1498 aa29.05■■■□□ 2.24
ERBB3-209ENST00000549282 ERCC6Q03468 1493 aa29.01■■■□□ 2.23
ERBB3-209ENST00000549282 ATAD2BQ9ULI0 1458 aa28.89■■■□□ 2.22
ERBB3-209ENST00000549282 SMARCA2P51531 1590 aa28.75■■■□□ 2.19
ERBB3-209ENST00000549282 NESP48681 1621 aa28.73■■■□□ 2.19
ERBB3-209ENST00000549282 HMGXB3Q12766 1538 aa28.73■■■□□ 2.19
ERBB3-209ENST00000549282 SMARCA4P51532 1647 aa28.71■■■□□ 2.19
ERBB3-209ENST00000549282 BAZ1BQ9UIG0 1483 aaKnown RBP28.57■■■□□ 2.16
ERBB3-209ENST00000549282 BAZ1AQ9NRL2 1556 aaPredicted RBP28.51■■■□□ 2.15
ERBB3-209ENST00000549282 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.15
ERBB3-209ENST00000549282 PEG3Q9GZU2 1588 aa28.43■■■□□ 2.14
ERBB3-209ENST00000549282 LAMC3Q9Y6N6 1575 aa28.41■■■□□ 2.14
ERBB3-209ENST00000549282 PDS5BQ9NTI5 1447 aa28.31■■■□□ 2.12
ERBB3-209ENST00000549282 MROH2BQ7Z745 1585 aa28.3■■■□□ 2.12
ERBB3-209ENST00000549282 KIF21AQ7Z4S6 1674 aa28.29■■■□□ 2.12
ERBB3-209ENST00000549282 TRIM41Q8WV44 630 aa28.19■■■□□ 2.1
ERBB3-209ENST00000549282 CADPSQ9ULU8 1353 aa28.16■■■□□ 2.1
ERBB3-209ENST00000549282 MRC2Q9UBG0 1479 aa28.06■■■□□ 2.08
ERBB3-209ENST00000549282 WDR62O43379 1518 aa27.98■■■□□ 2.07
ERBB3-209ENST00000549282 WIZO95785 1651 aa27.93■■■□□ 2.06
ERBB3-209ENST00000549282 CEP164Q9UPV0 1460 aa27.86■■■□□ 2.05
ERBB3-209ENST00000549282 FANCD2Q9BXW9 1451 aa27.81■■■□□ 2.04
ERBB3-209ENST00000549282 OSCARQ8IYS5 282 aa27.8■■■□□ 2.04
ERBB3-209ENST00000549282 CFTRP13569 1480 aa27.72■■■□□ 2.03
ERBB3-209ENST00000549282 URB2Q14146 1524 aaKnown RBP27.61■■■□□ 2.01
ERBB3-209ENST00000549282 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2
ERBB3-209ENST00000549282 TOP2AP11388 1531 aaKnown RBP27.51■■■□□ 2
ERBB3-209ENST00000549282 RIMBP3CA6NJZ7 1639 aa27.38■■□□□ 1.97
ERBB3-209ENST00000549282 RIMBP3BA6NNM3 1639 aa27.38■■□□□ 1.97
ERBB3-209ENST00000549282 RIMBP3Q9UFD9 1639 aa27.38■■□□□ 1.97
ERBB3-209ENST00000549282 ZNF608Q9ULD9 1512 aaPredicted RBP27.36■■□□□ 1.97
ERBB3-209ENST00000549282 PRDM2Q13029 1718 aa27.33■■□□□ 1.97
ERBB3-209ENST00000549282 IFT140Q96RY7 1462 aa27.33■■□□□ 1.97
ERBB3-209ENST00000549282 CCDC88BA6NC98 1476 aa27.28■■□□□ 1.96
ERBB3-209ENST00000549282 ARHGEF11O15085 1522 aa27.26■■□□□ 1.95
ERBB3-209ENST00000549282 TOPBP1Q92547 1522 aa27.23■■□□□ 1.95
ERBB3-209ENST00000549282 CYB5RLQ6IPT4 315 aa27.19■■□□□ 1.94
ERBB3-209ENST00000549282 ABCC8Q09428 1581 aa27.15■■□□□ 1.94
ERBB3-209ENST00000549282 EIF4G3O43432 1585 aaKnown RBP27.11■■□□□ 1.93
ERBB3-209ENST00000549282 AQRO60306 1485 aaKnown RBP eCLIP27.08■■□□□ 1.932e-8■■■■□ 21.2
ERBB3-209ENST00000549282 DNMBPQ6XZF7 1577 aa27.06■■□□□ 1.92
ERBB3-209ENST00000549282 FBLN2P98095 1184 aa27.04■■□□□ 1.92
ERBB3-209ENST00000549282 TRHP20396 242 aaPredicted RBP27.02■■□□□ 1.92
ERBB3-209ENST00000549282 CHD1O14646 1710 aa27.01■■□□□ 1.91
ERBB3-209ENST00000549282 TARBP1Q13395 1621 aaKnown RBP27.01■■□□□ 1.91
ERBB3-209ENST00000549282 ARAP1Q96P48 1450 aa26.95■■□□□ 1.91
ERBB3-209ENST00000549282 POLA1P09884 1462 aaPredicted RBP26.93■■□□□ 1.9
ERBB3-209ENST00000549282 RAD54L2Q9Y4B4 1467 aa26.87■■□□□ 1.89
ERBB3-209ENST00000549282 TDRD9Q8NDG6 1382 aaKnown RBP26.86■■□□□ 1.89
ERBB3-209ENST00000549282 SOGA1O94964 1423 aa26.84■■□□□ 1.89
ERBB3-209ENST00000549282 CHMP7Q8WUX9 453 aaPredicted RBP26.76■■□□□ 1.87
ERBB3-209ENST00000549282 SNAPC4Q5SXM2 1469 aa26.73■■□□□ 1.87
ERBB3-209ENST00000549282 FGD5Q6ZNL6 1462 aa26.69■■□□□ 1.86
ERBB3-209ENST00000549282 CLASP1Q7Z460 1538 aa26.69■■□□□ 1.86
ERBB3-209ENST00000549282 WDR97A6NE52 1622 aa26.66■■□□□ 1.86
ERBB3-209ENST00000549282 SYNJ1O43426 1573 aa26.64■■□□□ 1.86
ERBB3-209ENST00000549282 MAGI1Q96QZ7 1491 aaPredicted RBP26.64■■□□□ 1.86
ERBB3-209ENST00000549282 GRIN2BQ13224 1484 aa26.62■■□□□ 1.85
ERBB3-209ENST00000549282 CUX1P39880 1505 aa26.6■■□□□ 1.85
ERBB3-209ENST00000549282 SYNJ2O15056 1496 aa26.58■■□□□ 1.85
ERBB3-209ENST00000549282 AEBP2Q6ZN18 517 aaPredicted RBP26.54■■□□□ 1.84
ERBB3-209ENST00000549282 GAPVD1Q14C86 1478 aa26.48■■□□□ 1.83
ERBB3-209ENST00000549282 PBRM1Q86U86 1689 aa26.43■■□□□ 1.82
ERBB3-209ENST00000549282 ABCA10Q8WWZ4 1543 aa26.36■■□□□ 1.81
ERBB3-209ENST00000549282 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
ERBB3-209ENST00000549282 ERCC6L2Q5T890 1561 aa26.28■■□□□ 1.8
ERBB3-209ENST00000549282 GRIN2AQ12879 1464 aa26.26■■□□□ 1.79
ERBB3-209ENST00000549282 NUP160Q12769 1436 aa26.2■■□□□ 1.78
ERBB3-209ENST00000549282 WRNQ14191 1432 aaPredicted RBP eCLIP26.2■■□□□ 1.78
ERBB3-209ENST00000549282 CEP170Q5SW79 1584 aa26.19■■□□□ 1.78
ERBB3-209ENST00000549282 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
ERBB3-209ENST00000549282 FHAD1B1AJZ9 1412 aa26.12■■□□□ 1.77
ERBB3-209ENST00000549282 SUPT5HO00267 1087 aaKnown RBP26.11■■□□□ 1.77
ERBB3-209ENST00000549282 SHROOM2Q13796 1616 aa26.1■■□□□ 1.77
ERBB3-209ENST00000549282 TOP2BQ02880 1626 aa26.04■■□□□ 1.76
ERBB3-209ENST00000549282 BIVM-ERCC5R4GMW8 1640 aa26.03■■□□□ 1.76
ERBB3-209ENST00000549282 JPH4Q96JJ6 628 aa26.02■■□□□ 1.76
ERBB3-209ENST00000549282 PRG4Q92954 1404 aaPredicted RBP26.02■■□□□ 1.76
ERBB3-209ENST00000549282 ERICH3Q5RHP9 1530 aa26.01■■□□□ 1.75
ERBB3-209ENST00000549282 KIF13AQ9H1H9 1805 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms