RNA–Protein interactions for RNA: ENST00000557315.1

LGMN-215, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-215ENST00000557315 NISCHQ9Y2I1 1504 aa35.36■■■■□ 3.25
LGMN-215ENST00000557315 CCDC180Q9P1Z9 1646 aa31.46■■■□□ 2.63
LGMN-215ENST00000557315 ABCC9O60706 1549 aa30.77■■■□□ 2.52
LGMN-215ENST00000557315 RB1CC1Q8TDY2 1594 aa29.55■■■□□ 2.32
LGMN-215ENST00000557315 NACADO15069 1562 aa29.52■■■□□ 2.32
LGMN-215ENST00000557315 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
LGMN-215ENST00000557315 MYO15BQ96JP2 1530 aa29.37■■■□□ 2.29
LGMN-215ENST00000557315 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
LGMN-215ENST00000557315 DCAF1Q9Y4B6 1507 aa29.25■■■□□ 2.27
LGMN-215ENST00000557315 UNC13AQ9UPW8 1703 aa29.09■■■□□ 2.25
LGMN-215ENST00000557315 BICRAQ9NZM4 1560 aa28.84■■■□□ 2.21
LGMN-215ENST00000557315 SCRIBQ14160 1630 aa28.71■■■□□ 2.19
LGMN-215ENST00000557315 PABPN1Q86U42 306 aaKnown RBP eCLIP28.7■■■□□ 2.18
LGMN-215ENST00000557315 DNAJC5BQ9UF47 199 aa28.6■■■□□ 2.17
LGMN-215ENST00000557315 SHROOM4Q9ULL8 1493 aa28.35■■■□□ 2.13
LGMN-215ENST00000557315 EIF4G1Q04637 1599 aaKnown RBP27.98■■■□□ 2.07
LGMN-215ENST00000557315 CC2D2AQ9P2K1 1620 aa27.88■■■□□ 2.05
LGMN-215ENST00000557315 CECR2Q9BXF3 1484 aa27.62■■■□□ 2.01
LGMN-215ENST00000557315 SMARCA4P51532 1647 aa27.47■■□□□ 1.99
LGMN-215ENST00000557315 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
LGMN-215ENST00000557315 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
LGMN-215ENST00000557315 MROH2BQ7Z745 1585 aa27.3■■□□□ 1.96
LGMN-215ENST00000557315 NCAPD3P42695 1498 aa27.26■■□□□ 1.95
LGMN-215ENST00000557315 PEG3Q9GZU2 1588 aa27.22■■□□□ 1.95
LGMN-215ENST00000557315 SMARCA2P51531 1590 aa27.2■■□□□ 1.94
LGMN-215ENST00000557315 HMGXB3Q12766 1538 aa27.15■■□□□ 1.94
LGMN-215ENST00000557315 WIZO95785 1651 aa27.01■■□□□ 1.91
LGMN-215ENST00000557315 BAZ1BQ9UIG0 1483 aaKnown RBP27■■□□□ 1.91
LGMN-215ENST00000557315 RSF1Q96T23 1441 aaPredicted RBP26.93■■□□□ 1.9
LGMN-215ENST00000557315 NESP48681 1621 aa26.68■■□□□ 1.86
LGMN-215ENST00000557315 TOP2AP11388 1531 aaKnown RBP26.66■■□□□ 1.86
LGMN-215ENST00000557315 LAMC3Q9Y6N6 1575 aa26.54■■□□□ 1.84
LGMN-215ENST00000557315 CADPSQ9ULU8 1353 aa26.42■■□□□ 1.82
LGMN-215ENST00000557315 ERCC6Q03468 1493 aa26.4■■□□□ 1.82
LGMN-215ENST00000557315 KIF21AQ7Z4S6 1674 aa26.4■■□□□ 1.82
LGMN-215ENST00000557315 CUX2O14529 1486 aa26.37■■□□□ 1.81
LGMN-215ENST00000557315 DNAJC5Q9H3Z4 198 aa26.36■■□□□ 1.81
LGMN-215ENST00000557315 CCDC88BA6NC98 1476 aa26.35■■□□□ 1.81
LGMN-215ENST00000557315 THOC2Q8NI27 1593 aaKnown RBP26.33■■□□□ 1.81
LGMN-215ENST00000557315 CFTRP13569 1480 aa26.31■■□□□ 1.8
LGMN-215ENST00000557315 PDS5BQ9NTI5 1447 aa26.26■■□□□ 1.79
LGMN-215ENST00000557315 PRDM2Q13029 1718 aa26.19■■□□□ 1.78
LGMN-215ENST00000557315 FANCD2Q9BXW9 1451 aa26.14■■□□□ 1.78
LGMN-215ENST00000557315 CEP164Q9UPV0 1460 aa26.09■■□□□ 1.77
LGMN-215ENST00000557315 MRC2Q9UBG0 1479 aa26.08■■□□□ 1.77
LGMN-215ENST00000557315 WDR62O43379 1518 aa26.06■■□□□ 1.76
LGMN-215ENST00000557315 SUPT5HO00267 1087 aaKnown RBP26.06■■□□□ 1.76
LGMN-215ENST00000557315 URB2Q14146 1524 aaKnown RBP25.97■■□□□ 1.75
LGMN-215ENST00000557315 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
LGMN-215ENST00000557315 DNMBPQ6XZF7 1577 aa25.72■■□□□ 1.71
LGMN-215ENST00000557315 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
LGMN-215ENST00000557315 CUX1P39880 1505 aa25.61■■□□□ 1.69
LGMN-215ENST00000557315 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
LGMN-215ENST00000557315 POLA1P09884 1462 aaPredicted RBP25.54■■□□□ 1.68
LGMN-215ENST00000557315 IFT140Q96RY7 1462 aa25.53■■□□□ 1.68
LGMN-215ENST00000557315 ZNF608Q9ULD9 1512 aaPredicted RBP25.53■■□□□ 1.68
LGMN-215ENST00000557315 FGD5Q6ZNL6 1462 aa25.47■■□□□ 1.67
LGMN-215ENST00000557315 RAD54L2Q9Y4B4 1467 aa25.44■■□□□ 1.66
LGMN-215ENST00000557315 EIF4G3O43432 1585 aaKnown RBP25.43■■□□□ 1.66
LGMN-215ENST00000557315 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
LGMN-215ENST00000557315 WDR97A6NE52 1622 aa25.37■■□□□ 1.65
LGMN-215ENST00000557315 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
LGMN-215ENST00000557315 SOGA1O94964 1423 aa25.35■■□□□ 1.65
LGMN-215ENST00000557315 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
LGMN-215ENST00000557315 AQRO60306 1485 aaKnown RBP eCLIP25.33■■□□□ 1.65
LGMN-215ENST00000557315 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
LGMN-215ENST00000557315 TDRD9Q8NDG6 1382 aaKnown RBP25.24■■□□□ 1.63
LGMN-215ENST00000557315 ABCA10Q8WWZ4 1543 aa25.22■■□□□ 1.63
LGMN-215ENST00000557315 ABCA5Q8WWZ7 1642 aa25.19■■□□□ 1.62
LGMN-215ENST00000557315 TRIM41Q8WV44 630 aa25.15■■□□□ 1.62
LGMN-215ENST00000557315 OSCARQ8IYS5 282 aa25.14■■□□□ 1.62
LGMN-215ENST00000557315 CHD1O14646 1710 aa25.14■■□□□ 1.61
LGMN-215ENST00000557315 PBRM1Q86U86 1689 aa25.13■■□□□ 1.61
LGMN-215ENST00000557315 SNAPC4Q5SXM2 1469 aa25.09■■□□□ 1.61
LGMN-215ENST00000557315 GAPVD1Q14C86 1478 aa25.09■■□□□ 1.61
LGMN-215ENST00000557315 GRIN2BQ13224 1484 aa25.07■■□□□ 1.6
LGMN-215ENST00000557315 MAGI1Q96QZ7 1491 aaPredicted RBP25.02■■□□□ 1.6
LGMN-215ENST00000557315 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
LGMN-215ENST00000557315 SYNJ2O15056 1496 aa24.93■■□□□ 1.58
LGMN-215ENST00000557315 ERICH3Q5RHP9 1530 aa24.89■■□□□ 1.57
LGMN-215ENST00000557315 CLASP1Q7Z460 1538 aa24.86■■□□□ 1.57
LGMN-215ENST00000557315 FBLN2P98095 1184 aa24.84■■□□□ 1.57
LGMN-215ENST00000557315 RIMBP3CA6NJZ7 1639 aa24.81■■□□□ 1.56
LGMN-215ENST00000557315 RIMBP3BA6NNM3 1639 aa24.81■■□□□ 1.56
LGMN-215ENST00000557315 RIMBP3Q9UFD9 1639 aa24.81■■□□□ 1.56
LGMN-215ENST00000557315 GRIN2AQ12879 1464 aa24.79■■□□□ 1.56
LGMN-215ENST00000557315 CHMP7Q8WUX9 453 aaPredicted RBP24.79■■□□□ 1.56
LGMN-215ENST00000557315 FHAD1B1AJZ9 1412 aa24.78■■□□□ 1.56
LGMN-215ENST00000557315 ARHGEF11O15085 1522 aa24.76■■□□□ 1.55
LGMN-215ENST00000557315 CEP170Q5SW79 1584 aa24.75■■□□□ 1.55
LGMN-215ENST00000557315 KIF27Q86VH2 1401 aa24.74■■□□□ 1.55
LGMN-215ENST00000557315 NUP160Q12769 1436 aa24.72■■□□□ 1.55
LGMN-215ENST00000557315 IGF1RP08069 1367 aa24.72■■□□□ 1.55
LGMN-215ENST00000557315 RUSC2Q8N2Y8 1516 aa24.69■■□□□ 1.54
LGMN-215ENST00000557315 CUL7Q14999 1698 aa24.66■■□□□ 1.54
LGMN-215ENST00000557315 ARAP1Q96P48 1450 aa24.61■■□□□ 1.53
LGMN-215ENST00000557315 SHROOM2Q13796 1616 aa24.59■■□□□ 1.53
LGMN-215ENST00000557315 ERCC6L2Q5T890 1561 aa24.57■■□□□ 1.52
LGMN-215ENST00000557315 CYB5RLQ6IPT4 315 aa24.52■■□□□ 1.52
LGMN-215ENST00000557315 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms