Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CHRAC1Q9NRG0 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 AC131009.4-201ENST00000624048 1740 ntBASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 AL512652.2-201ENST00000625156 1716 ntBASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 ME2P1-201ENST00000426028 1970 ntBASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 PMS2P1-201ENST00000431037 1228 ntBASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 KRT18P67-201ENST00000432816 1264 ntBASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 AF186996.4-201ENST00000467186 377 ntBASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 AC105339.3-201ENST00000560043 636 ntBASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 AC008667.4-201ENST00000607370 168 ntBASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.9■□□□□ 0.3
CHRAC1Q9NRG0 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CHRAC1Q9NRG0 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
CHRAC1Q9NRG0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CHRAC1Q9NRG0 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHRAC1Q9NRG0 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 IGHV3-65-201ENST00000523210 341 ntBASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 MIR1199-201ENST00000621445 119 ntBASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHRAC1Q9NRG0 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHRAC1Q9NRG0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms