Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM11Q96F44 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM11Q96F44 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 HCG4-201ENST00000418983 998 ntBASIC17.75■□□□□ 0.43
TRIM11Q96F44 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 RNPS1P1-201ENST00000507437 918 ntBASIC17.75■□□□□ 0.43
TRIM11Q96F44 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 AC107918.2-201ENST00000530817 355 ntBASIC17.75■□□□□ 0.43
TRIM11Q96F44 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRIM11Q96F44 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM11Q96F44 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 ALOX12P2-203ENST00000570921 1945 ntBASIC17.74■□□□□ 0.43
TRIM11Q96F44 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 RPS2P28-201ENST00000314255 741 ntBASIC17.74■□□□□ 0.43
TRIM11Q96F44 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 AC087641.1-201ENST00000557561 1021 ntBASIC17.74■□□□□ 0.43
TRIM11Q96F44 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TRIM11Q96F44 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.74■□□□□ 0.43
TRIM11Q96F44 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TRIM11Q96F44 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms