Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 AC126177.1-201ENST00000547829 2218 ntBASIC15.09■□□□□ 0.01
CCDC58Q4VC31 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
CCDC58Q4VC31 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 AL645728.1-201ENST00000366221 2101 ntBASIC15.08■□□□□ 0.01
CCDC58Q4VC31 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
CCDC58Q4VC31 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.08■□□□□ 0
CCDC58Q4VC31 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 AC003669.1-201ENST00000334569 611 ntBASIC15.08■□□□□ 0
CCDC58Q4VC31 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC15.08■□□□□ 0
CCDC58Q4VC31 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC15.08■□□□□ 0
CCDC58Q4VC31 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
CCDC58Q4VC31 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC15.08■□□□□ 0
CCDC58Q4VC31 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
CCDC58Q4VC31 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.08■□□□□ 0
CCDC58Q4VC31 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC15.08■□□□□ 0
CCDC58Q4VC31 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.08■□□□□ 0
CCDC58Q4VC31 TMEM191A-211ENST00000637163 1067 ntBASIC15.08■□□□□ 0
CCDC58Q4VC31 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.08■□□□□ 0
CCDC58Q4VC31 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CCDC58Q4VC31 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
CCDC58Q4VC31 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC15.08■□□□□ 0
CCDC58Q4VC31 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
CCDC58Q4VC31 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.08■□□□□ 0
CCDC58Q4VC31 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.08■□□□□ 0
CCDC58Q4VC31 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CCDC58Q4VC31 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.08■□□□□ 0
CCDC58Q4VC31 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.07■□□□□ 0
CCDC58Q4VC31 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.07■□□□□ 0
CCDC58Q4VC31 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.07■□□□□ 0
CCDC58Q4VC31 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CCDC58Q4VC31 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.07■□□□□ 0
CCDC58Q4VC31 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.07■□□□□ 0
CCDC58Q4VC31 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 SNX18-202ENST00000343017 3140 ntBASIC15.07■□□□□ 0
CCDC58Q4VC31 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.07■□□□□ 0
CCDC58Q4VC31 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.07■□□□□ 0
CCDC58Q4VC31 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
CCDC58Q4VC31 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.07■□□□□ 0
CCDC58Q4VC31 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.07■□□□□ 0
CCDC58Q4VC31 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC15.07■□□□□ 0
CCDC58Q4VC31 CD320-202ENST00000537716 1119 ntTSL 2 BASIC15.07■□□□□ 0
CCDC58Q4VC31 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC15.07■□□□□ 0
CCDC58Q4VC31 RNF126P1-202ENST00000569893 925 ntBASIC15.07■□□□□ 0
CCDC58Q4VC31 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.07■□□□□ 0
CCDC58Q4VC31 AC139887.4-201ENST00000607877 719 ntBASIC15.07■□□□□ 0
CCDC58Q4VC31 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCDC58Q4VC31 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CCDC58Q4VC31 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.07■□□□□ 0
CCDC58Q4VC31 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms