Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PDS5AQ29RF7 SPTSSB-204ENST00000617024 1292 ntBASIC20.01■□□□□ 0.79
PDS5AQ29RF7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC20■□□□□ 0.79
PDS5AQ29RF7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC20■□□□□ 0.79
PDS5AQ29RF7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20■□□□□ 0.79
PDS5AQ29RF7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 AP001094.4-201ENST00000579008 2176 ntBASIC20■□□□□ 0.79
PDS5AQ29RF7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC20■□□□□ 0.79
PDS5AQ29RF7 LTB4R2-202ENST00000528054 3092 ntBASIC20■□□□□ 0.79
PDS5AQ29RF7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PDS5AQ29RF7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PDS5AQ29RF7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20■□□□□ 0.79
PDS5AQ29RF7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 AC006538.1-201ENST00000567905 1585 ntBASIC20■□□□□ 0.79
PDS5AQ29RF7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PDS5AQ29RF7 FAM8A3P-201ENST00000427218 844 ntBASIC20■□□□□ 0.79
PDS5AQ29RF7 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC20■□□□□ 0.79
PDS5AQ29RF7 AC093724.1-201ENST00000448659 1027 ntBASIC20■□□□□ 0.79
PDS5AQ29RF7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20■□□□□ 0.79
PDS5AQ29RF7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 GGT4P-201ENST00000623672 1708 ntBASIC19.99■□□□□ 0.79
PDS5AQ29RF7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 GPAA1P2-202ENST00000606848 1787 ntBASIC19.99■□□□□ 0.79
PDS5AQ29RF7 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 CEP83-AS1-201ENST00000623122 2482 ntBASIC19.99■□□□□ 0.79
PDS5AQ29RF7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 MIR943-201ENST00000401286 94 ntBASIC19.99■□□□□ 0.79
PDS5AQ29RF7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 RNA5SP421-201ENST00000516864 134 ntBASIC19.99■□□□□ 0.79
PDS5AQ29RF7 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDS5AQ29RF7 AL031731.1-201ENST00000642131 2094 ntBASIC19.99■□□□□ 0.79
PDS5AQ29RF7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 AC069120.2-201ENST00000524091 540 ntBASIC19.98■□□□□ 0.79
PDS5AQ29RF7 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 AJ011932.1-201ENST00000621707 465 ntBASIC19.98■□□□□ 0.79
PDS5AQ29RF7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDS5AQ29RF7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDS5AQ29RF7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms