RNA–Protein interactions for RNA: ENST00000640999.1

STRADA-254, Transcript of STE20-related kinase adaptor alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene STRADA, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADA-254ENST00000640999 NISCHQ9Y2I1 1504 aa36.96■■■■□ 3.51
STRADA-254ENST00000640999 CCDC180Q9P1Z9 1646 aa31.69■■■□□ 2.66
STRADA-254ENST00000640999 ZCCHC6Q5VYS8 1495 aaKnown RBP31.22■■■□□ 2.59
STRADA-254ENST00000640999 SHROOM4Q9ULL8 1493 aa31.02■■■□□ 2.56
STRADA-254ENST00000640999 DCAF1Q9Y4B6 1507 aa30.46■■■□□ 2.47
STRADA-254ENST00000640999 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
STRADA-254ENST00000640999 SUPT5HO00267 1087 aaKnown RBP30.29■■■□□ 2.44
STRADA-254ENST00000640999 MYO15BQ96JP2 1530 aa29.71■■■□□ 2.35
STRADA-254ENST00000640999 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.31
STRADA-254ENST00000640999 SCRIBQ14160 1630 aa29.44■■■□□ 2.3
STRADA-254ENST00000640999 ABCC9O60706 1549 aa29.41■■■□□ 2.3
STRADA-254ENST00000640999 NACADO15069 1562 aa29.3■■■□□ 2.28
STRADA-254ENST00000640999 RSF1Q96T23 1441 aaPredicted RBP29.09■■■□□ 2.25
STRADA-254ENST00000640999 RB1CC1Q8TDY2 1594 aa28.85■■■□□ 2.21
STRADA-254ENST00000640999 CECR2Q9BXF3 1484 aa28.75■■■□□ 2.19
STRADA-254ENST00000640999 MROH2BQ7Z745 1585 aa28.66■■■□□ 2.18
STRADA-254ENST00000640999 WIZO95785 1651 aa28.5■■■□□ 2.15
STRADA-254ENST00000640999 LOC105371045A0A1W2PR82 267 aa28.46■■■□□ 2.15
STRADA-254ENST00000640999 UNC13AQ9UPW8 1703 aa28.44■■■□□ 2.14
STRADA-254ENST00000640999 BAZ1AQ9NRL2 1556 aaPredicted RBP28.43■■■□□ 2.14
STRADA-254ENST00000640999 TRIM41Q8WV44 630 aa28.33■■■□□ 2.13
STRADA-254ENST00000640999 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
STRADA-254ENST00000640999 PCGF6Q9BYE7 350 aa28.13■■■□□ 2.09
STRADA-254ENST00000640999 TOP2AP11388 1531 aaKnown RBP28.11■■■□□ 2.09
STRADA-254ENST00000640999 EIF4G1Q04637 1599 aaKnown RBP28.09■■■□□ 2.09
STRADA-254ENST00000640999 BICRAQ9NZM4 1560 aa28.07■■■□□ 2.08
STRADA-254ENST00000640999 HRCP23327 699 aa28.04■■■□□ 2.08
STRADA-254ENST00000640999 FAM9AQ8IZU1 332 aaPredicted RBP27.95■■■□□ 2.07
STRADA-254ENST00000640999 SMARCA2P51531 1590 aa27.93■■■□□ 2.06
STRADA-254ENST00000640999 CCDC88BA6NC98 1476 aa27.93■■■□□ 2.06
STRADA-254ENST00000640999 PABPN1Q86U42 306 aaKnown RBP eCLIP27.9■■■□□ 2.06
STRADA-254ENST00000640999 TRIM26Q12899 539 aaPredicted RBP27.79■■■□□ 2.04
STRADA-254ENST00000640999 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
STRADA-254ENST00000640999 ABCC8Q09428 1581 aa27.7■■■□□ 2.03
STRADA-254ENST00000640999 EHMT2Q96KQ7 1210 aa27.61■■■□□ 2.01
STRADA-254ENST00000640999 ATAD2BQ9ULI0 1458 aa27.52■■■□□ 2
STRADA-254ENST00000640999 BAZ1BQ9UIG0 1483 aaKnown RBP27.41■■□□□ 1.98
STRADA-254ENST00000640999 SOGA1O94964 1423 aa27.37■■□□□ 1.97
STRADA-254ENST00000640999 PPARGC1BQ86YN6 1023 aaKnown RBP27.36■■□□□ 1.97
STRADA-254ENST00000640999 EEA1Q15075 1411 aa27.34■■□□□ 1.97
STRADA-254ENST00000640999 WRNQ14191 1432 aaPredicted RBP eCLIP27.32■■□□□ 1.96
STRADA-254ENST00000640999 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
STRADA-254ENST00000640999 CSRNP3Q8WYN3 585 aa27.22■■□□□ 1.95
STRADA-254ENST00000640999 SYNJ1O43426 1573 aa27.21■■□□□ 1.95
STRADA-254ENST00000640999 TNIKQ9UKE5 1360 aa27.18■■□□□ 1.94
STRADA-254ENST00000640999 CEP162Q5TB80 1403 aa27.15■■□□□ 1.94
STRADA-254ENST00000640999 HMGXB3Q12766 1538 aa27.1■■□□□ 1.93
STRADA-254ENST00000640999 ZEB1P37275 1124 aaPredicted RBP27.1■■□□□ 1.93
STRADA-254ENST00000640999 NCAPD3P42695 1498 aa27.09■■□□□ 1.93
STRADA-254ENST00000640999 GOLGA3Q08378 1498 aa27.07■■□□□ 1.92
STRADA-254ENST00000640999 UBTFP17480 764 aaKnown RBP27■■□□□ 1.91
STRADA-254ENST00000640999 KIF21BO75037 1637 aa26.99■■□□□ 1.91
STRADA-254ENST00000640999 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
STRADA-254ENST00000640999 CEP164Q9UPV0 1460 aa26.96■■□□□ 1.91
STRADA-254ENST00000640999 BIVM-ERCC5R4GMW8 1640 aa26.91■■□□□ 1.9
STRADA-254ENST00000640999 CFTRP13569 1480 aa26.77■■□□□ 1.88
STRADA-254ENST00000640999 RAPGEF2Q9Y4G8 1499 aa26.74■■□□□ 1.87
STRADA-254ENST00000640999 CUX1P39880 1505 aa26.72■■□□□ 1.87
STRADA-254ENST00000640999 CLIP1P30622 1438 aa26.71■■□□□ 1.87
STRADA-254ENST00000640999 TTBK1Q5TCY1 1321 aaPredicted RBP26.66■■□□□ 1.86
STRADA-254ENST00000640999 PRDM2Q13029 1718 aa26.66■■□□□ 1.86
STRADA-254ENST00000640999 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.63■■□□□ 1.85
STRADA-254ENST00000640999 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
STRADA-254ENST00000640999 PRXQ9BXM0 1461 aa26.6■■□□□ 1.85
STRADA-254ENST00000640999 VPS8Q8N3P4 1428 aa26.59■■□□□ 1.85
STRADA-254ENST00000640999 CCER1Q8TC90 406 aaPredicted RBP26.56■■□□□ 1.84
STRADA-254ENST00000640999 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
STRADA-254ENST00000640999 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
STRADA-254ENST00000640999 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
STRADA-254ENST00000640999 RANGAP1P46060 587 aaPredicted RBP26.38■■□□□ 1.81
STRADA-254ENST00000640999 APLP2Q06481 763 aa26.36■■□□□ 1.81
STRADA-254ENST00000640999 ARAP1Q96P48 1450 aa26.34■■□□□ 1.81
STRADA-254ENST00000640999 CUX2O14529 1486 aa26.28■■□□□ 1.8
STRADA-254ENST00000640999 FGD5Q6ZNL6 1462 aa26.27■■□□□ 1.8
STRADA-254ENST00000640999 IGF1RP08069 1367 aa26.24■■□□□ 1.79
STRADA-254ENST00000640999 FANCD2Q9BXW9 1451 aa26.22■■□□□ 1.79
STRADA-254ENST00000640999 HNRNPUL2Q1KMD3 747 aaKnown RBP26.19■■□□□ 1.78
STRADA-254ENST00000640999 ARHGAP35Q9NRY4 1499 aa26.17■■□□□ 1.78
STRADA-254ENST00000640999 DNMBPQ6XZF7 1577 aa26.12■■□□□ 1.77
STRADA-254ENST00000640999 CARMIL1Q5VZK9 1371 aa26.11■■□□□ 1.77
STRADA-254ENST00000640999 KANK4Q5T7N3 995 aaPredicted RBP26.07■■□□□ 1.76
STRADA-254ENST00000640999 NESP48681 1621 aa26.06■■□□□ 1.76
STRADA-254ENST00000640999 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
STRADA-254ENST00000640999 ABCA10Q8WWZ4 1543 aa26.01■■□□□ 1.75
STRADA-254ENST00000640999 POLA1P09884 1462 aaPredicted RBP26■■□□□ 1.75
STRADA-254ENST00000640999 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
STRADA-254ENST00000640999 RAD54L2Q9Y4B4 1467 aa25.98■■□□□ 1.75
STRADA-254ENST00000640999 RRBP1Q9P2E9 1410 aaKnown RBP25.96■■□□□ 1.75
STRADA-254ENST00000640999 DIEXFQ68CQ4 756 aaKnown RBP25.91■■□□□ 1.74
STRADA-254ENST00000640999 MAP3K1Q13233 1512 aa25.9■■□□□ 1.74
STRADA-254ENST00000640999 URB2Q14146 1524 aaKnown RBP25.87■■□□□ 1.73
STRADA-254ENST00000640999 CUL7Q14999 1698 aa25.86■■□□□ 1.73
STRADA-254ENST00000640999 TIAM1Q13009 1591 aa25.86■■□□□ 1.73
STRADA-254ENST00000640999 WDR97A6NE52 1622 aa25.85■■□□□ 1.73
STRADA-254ENST00000640999 ZNF316A6NFI3 1004 aaPredicted RBP25.83■■□□□ 1.73
STRADA-254ENST00000640999 CCNB3Q8WWL7 1395 aa25.81■■□□□ 1.72
STRADA-254ENST00000640999 FHAD1B1AJZ9 1412 aa25.79■■□□□ 1.72
STRADA-254ENST00000640999 CLSPNQ9HAW4 1339 aa25.78■■□□□ 1.72
STRADA-254ENST00000640999 PDS5BQ9NTI5 1447 aa25.77■■□□□ 1.72
STRADA-254ENST00000640999 DHX57Q6P158 1386 aaKnown RBP25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms