Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.31□□□□□ -0.441e-7■■□□□ 12.5
XRN2Q9H0D6 CUL1-203ENST00000602748 3054 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.451e-7■■□□□ 12.5
XRN2Q9H0D6 TRIM25-204ENST00000570749 614 ntTSL 211.63□□□□□ -0.551e-7■■□□□ 12.5
XRN2Q9H0D6 CHD2-207ENST00000626782 2131 ntTSL 2 BASIC10.9□□□□□ -0.671e-7■■□□□ 12.5
XRN2Q9H0D6 CHD2-206ENST00000625990 888 ntTSL 510.7□□□□□ -0.71e-7■■□□□ 12.5
XRN2Q9H0D6 CUL1-202ENST00000409469 2857 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.771e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.861e-7■■□□□ 12.5
XRN2Q9H0D6 TRIM25-203ENST00000570473 498 ntTSL 39.39□□□□□ -0.911e-7■■□□□ 12.5
XRN2Q9H0D6 AC013394.1-202ENST00000630790 4499 ntTSL 29.38□□□□□ -0.911e-7■■□□□ 12.5
XRN2Q9H0D6 AURKB-208ENST00000581511 742 ntTSL 59.24□□□□□ -0.931e-7■■□□□ 12.5
XRN2Q9H0D6 ZNF655-213ENST00000425063 4624 ntTSL 3 BASIC8.95□□□□□ -0.981e-7■■□□□ 12.5
XRN2Q9H0D6 RARS2-204ENST00000497828 672 ntTSL 28.76□□□□□ -1.011e-7■■□□□ 12.5
XRN2Q9H0D6 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.68□□□□□ -1.021e-7■■□□□ 12.5
XRN2Q9H0D6 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.43□□□□□ -1.221e-7■■□□□ 12.5
XRN2Q9H0D6 FDFT1-213ENST00000528729 570 ntTSL 37.32□□□□□ -1.241e-7■■□□□ 12.5
XRN2Q9H0D6 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.86□□□□□ -1.311e-7■■□□□ 12.5
XRN2Q9H0D6 CHD2-221ENST00000635856 4236 ntTSL 55.99□□□□□ -1.451e-7■■□□□ 12.5
XRN2Q9H0D6 CHD2-227ENST00000637572 4452 ntTSL 55.8□□□□□ -1.481e-7■■□□□ 12.5
XRN2Q9H0D6 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.65□□□□□ -1.51e-7■■□□□ 12.5
XRN2Q9H0D6 FBXO11-204ENST00000424163 560 ntTSL 43.4□□□□□ -1.871e-7■■□□□ 12.5
XRN2Q9H0D6 FDFT1-216ENST00000529521 418 ntTSL 22.97□□□□□ -1.931e-7■■□□□ 12.5
XRN2Q9H0D6 MGRN1-208ENST00000587747 1898 ntTSL 518.97■□□□□ 0.633e-6■■□□□ 12.5
XRN2Q9H0D6 MGRN1-204ENST00000536343 1575 ntTSL 217.98■□□□□ 0.473e-6■■□□□ 12.5
XRN2Q9H0D6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.233e-6■■□□□ 12.5
XRN2Q9H0D6 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.193e-6■■□□□ 12.5
XRN2Q9H0D6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.033e-6■■□□□ 12.5
XRN2Q9H0D6 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.71□□□□□ -0.063e-6■■□□□ 12.5
XRN2Q9H0D6 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.283e-6■■□□□ 12.5
XRN2Q9H0D6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.771e-6■■□□□ 12.5
XRN2Q9H0D6 SH2B1-208ENST00000563591 588 ntTSL 226.45■■□□□ 1.829e-10■■□□□ 12.5
XRN2Q9H0D6 SH2B1-211ENST00000566209 533 ntTSL 415.15■□□□□ 0.029e-10■■□□□ 12.5
XRN2Q9H0D6 COASY-213ENST00000591753 2225 ntTSL 1 (best)17.51■□□□□ 0.396e-9■■□□□ 12.5
XRN2Q9H0D6 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -06e-9■■□□□ 12.5
XRN2Q9H0D6 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.7□□□□□ -0.066e-9■■□□□ 12.5
XRN2Q9H0D6 COASY-201ENST00000393818 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.246e-9■■□□□ 12.5
XRN2Q9H0D6 CD164-209ENST00000512212 590 ntTSL 216.24■□□□□ 0.197e-7■■□□□ 12.5
XRN2Q9H0D6 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.24■□□□□ 0.197e-7■■□□□ 12.5
XRN2Q9H0D6 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC12.2□□□□□ -0.467e-7■■□□□ 12.5
XRN2Q9H0D6 CD164-202ENST00000310786 2993 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.87e-7■■□□□ 12.5
XRN2Q9H0D6 CD164-203ENST00000324953 2936 ntTSL 1 (best) BASIC8.84□□□□□ -0.997e-7■■□□□ 12.5
XRN2Q9H0D6 CD164-201ENST00000275080 2954 ntTSL 1 (best) BASIC8.78□□□□□ -17e-7■■□□□ 12.5
XRN2Q9H0D6 PCK2-207ENST00000559171 508 ntTSL 315.98■□□□□ 0.151e-10■■□□□ 12.5
XRN2Q9H0D6 CTSB-214ENST00000527243 580 ntTSL 413.12□□□□□ -0.315e-6■■□□□ 12.5
XRN2Q9H0D6 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC7.67□□□□□ -1.186e-6■■□□□ 12.5
XRN2Q9H0D6 AC024592.3-203ENST00000585661 431 ntAPPRIS P1 TSL 220.2■□□□□ 0.827e-7■■□□□ 12.5
XRN2Q9H0D6 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC20.2■□□□□ 0.827e-7■■□□□ 12.5
XRN2Q9H0D6 AC024592.3-201ENST00000592091 2118 ntTSL 217.54■□□□□ 0.47e-7■■□□□ 12.5
XRN2Q9H0D6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.61■□□□□ 0.097e-7■■□□□ 12.5
XRN2Q9H0D6 RRBP1-211ENST00000620641 582 ntTSL 218.73■□□□□ 0.592e-6■■□□□ 12.5
XRN2Q9H0D6 GUK1-231ENST00000485859 325 ntTSL 1 (best)20.24■□□□□ 0.835e-10■■□□□ 12.5
XRN2Q9H0D6 ANKRD17-210ENST00000561029 2717 ntTSL 520.92■□□□□ 0.944e-12■■□□□ 12.5
XRN2Q9H0D6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.99■□□□□ 0.474e-12■■□□□ 12.5
XRN2Q9H0D6 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.24e-12■■□□□ 12.5
XRN2Q9H0D6 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC11.85□□□□□ -0.514e-12■■□□□ 12.5
XRN2Q9H0D6 ANKRD17-207ENST00000558247 8456 ntAPPRIS ALT2 TSL 1 (best)6.14□□□□□ -1.434e-12■■□□□ 12.5
XRN2Q9H0D6 FOXP4-201ENST00000307972 3745 ntTSL 1 (best) BASIC11.35□□□□□ -0.591e-6■■□□□ 12.5
XRN2Q9H0D6 EPS8L2-219ENST00000531348 582 ntTSL 221.12■□□□□ 0.978e-8■■□□□ 12.4
XRN2Q9H0D6 EPS8L2-202ENST00000524474 907 ntTSL 221.9■■□□□ 1.14e-13■■□□□ 12.4
XRN2Q9H0D6 EPS8L2-207ENST00000526651 572 ntTSL 419.76■□□□□ 0.754e-13■■□□□ 12.4
XRN2Q9H0D6 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC9.55□□□□□ -0.886e-10■■□□□ 12.4
XRN2Q9H0D6 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.77□□□□□ -1.336e-10■■□□□ 12.4
XRN2Q9H0D6 ACAP3-210ENST00000478065 2393 ntTSL 319.15■□□□□ 0.669e-8■■□□□ 12.4
XRN2Q9H0D6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.193e-7■■□□□ 12.4
XRN2Q9H0D6 MIF-203ENST00000498385 435 ntTSL 223.55■■□□□ 1.363e-7■■□□□ 12.4
XRN2Q9H0D6 MIF-202ENST00000465752 589 ntTSL 1 (best)21.63■■□□□ 1.053e-7■■□□□ 12.4
XRN2Q9H0D6 CTDSPL-204ENST00000435525 371 ntTSL 318.75■□□□□ 0.596e-17■■□□□ 12.4
XRN2Q9H0D6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.433e-7■■□□□ 12.4
XRN2Q9H0D6 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC9.21□□□□□ -0.936e-17■■□□□ 12.4
XRN2Q9H0D6 SYNJ2-209ENST00000640569 2040 nt20.1■□□□□ 0.816e-9■■□□□ 12.4
XRN2Q9H0D6 SNHG4-203ENST00000506188 801 ntTSL 416.61■□□□□ 0.252e-8■■□□□ 12.4
XRN2Q9H0D6 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC15.63■□□□□ 0.092e-8■■□□□ 12.4
XRN2Q9H0D6 SNHG4-201ENST00000448190 542 ntTSL 415.5■□□□□ 0.072e-8■■□□□ 12.4
XRN2Q9H0D6 SNHG4-202ENST00000505522 629 ntTSL 1 (best)14.85□□□□□ -0.032e-8■■□□□ 12.4
XRN2Q9H0D6 SNHG4-206ENST00000508735 310 ntTSL 1 (best)14.85□□□□□ -0.032e-8■■□□□ 12.4
XRN2Q9H0D6 SNHG4-208ENST00000514110 679 ntTSL 1 (best)14.85□□□□□ -0.032e-8■■□□□ 12.4
XRN2Q9H0D6 SNHG4-207ENST00000513259 444 ntTSL 511.06□□□□□ -0.642e-8■■□□□ 12.4
XRN2Q9H0D6 SNHG4-205ENST00000507692 575 ntTSL 55.88□□□□□ -1.472e-8■■□□□ 12.4
XRN2Q9H0D6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC27.41■■□□□ 1.985e-6■■□□□ 12.4
XRN2Q9H0D6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.23■■□□□ 1.315e-6■■□□□ 12.4
XRN2Q9H0D6 TMC6-206ENST00000586271 970 ntTSL 221.51■■□□□ 1.032e-9■■□□□ 12.4
XRN2Q9H0D6 AGFG2-202ENST00000429987 928 ntTSL 320.76■□□□□ 0.912e-8■■□□□ 12.4
XRN2Q9H0D6 TMC6-219ENST00000591594 614 ntTSL 319.9■□□□□ 0.785e-6■■□□□ 12.4
XRN2Q9H0D6 MIR210HG-202ENST00000528245 659 ntTSL 319.32■□□□□ 0.685e-6■■□□□ 12.4
XRN2Q9H0D6 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.32■□□□□ 0.685e-6■■□□□ 12.4
XRN2Q9H0D6 CYP4F3-204ENST00000587360 559 ntTSL 418.9■□□□□ 0.625e-6■■□□□ 12.4
XRN2Q9H0D6 CYP4F3-207ENST00000592279 2078 ntTSL 218.81■□□□□ 0.65e-6■■□□□ 12.4
XRN2Q9H0D6 SCRIB-208ENST00000546337 516 ntTSL 318.22■□□□□ 0.515e-6■■□□□ 12.4
XRN2Q9H0D6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.445e-6■■□□□ 12.4
XRN2Q9H0D6 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.415e-6■■□□□ 12.4
XRN2Q9H0D6 MIR210HG-204ENST00000534540 367 ntTSL 217.06■□□□□ 0.325e-6■■□□□ 12.4
XRN2Q9H0D6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.78■□□□□ 0.125e-6■■□□□ 12.4
XRN2Q9H0D6 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.68■□□□□ 0.15e-6■■□□□ 12.4
XRN2Q9H0D6 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.065e-6■■□□□ 12.4
XRN2Q9H0D6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.035e-6■■□□□ 12.4
XRN2Q9H0D6 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.185e-6■■□□□ 12.4
XRN2Q9H0D6 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.235e-6■■□□□ 12.4
XRN2Q9H0D6 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.285e-6■■□□□ 12.4
XRN2Q9H0D6 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.325e-6■■□□□ 12.4
XRN2Q9H0D6 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC13.08□□□□□ -0.325e-6■■□□□ 12.4
XRN2Q9H0D6 CYP4F3-209ENST00000609670 337 ntTSL 313.04□□□□□ -0.325e-6■■□□□ 12.4
Retrieved 100 of 21,068 protein–RNA pairs in 137 ms