RNA–Protein interactions for RNA: ENST00000527243.5

CTSB-214, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-214ENST00000527243 NISCHQ9Y2I1 1504 aa27.45■■□□□ 1.98
CTSB-214ENST00000527243 CCDC180Q9P1Z9 1646 aa24.36■■□□□ 1.49
CTSB-214ENST00000527243 ABCC9O60706 1549 aa23.85■■□□□ 1.41
CTSB-214ENST00000527243 NACADO15069 1562 aa22.93■■□□□ 1.26
CTSB-214ENST00000527243 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
CTSB-214ENST00000527243 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
CTSB-214ENST00000527243 MYO15BQ96JP2 1530 aa22.87■■□□□ 1.25
CTSB-214ENST00000527243 DCAF8L2P0C7V8 631 aa22.8■■□□□ 1.24
CTSB-214ENST00000527243 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
CTSB-214ENST00000527243 UNC13AQ9UPW8 1703 aa22.37■■□□□ 1.17
CTSB-214ENST00000527243 BICRAQ9NZM4 1560 aa22.31■■□□□ 1.16
CTSB-214ENST00000527243 PABPN1Q86U42 306 aaKnown RBP eCLIP22.29■■□□□ 1.16
CTSB-214ENST00000527243 SCRIBQ14160 1630 aa22.2■■□□□ 1.14
CTSB-214ENST00000527243 SHROOM4Q9ULL8 1493 aa22.08■■□□□ 1.12
CTSB-214ENST00000527243 DNAJC5BQ9UF47 199 aa22■■□□□ 1.11
CTSB-214ENST00000527243 EIF4G1Q04637 1599 aaKnown RBP21.68■■□□□ 1.06
CTSB-214ENST00000527243 CC2D2AQ9P2K1 1620 aa21.58■■□□□ 1.04
CTSB-214ENST00000527243 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.03
CTSB-214ENST00000527243 SMARCA4P51532 1647 aa21.26■□□□□ 0.99
CTSB-214ENST00000527243 BAZ1AQ9NRL2 1556 aaPredicted RBP21.24■□□□□ 0.99
CTSB-214ENST00000527243 NCAPD3P42695 1498 aa21.21■□□□□ 0.99
CTSB-214ENST00000527243 ATAD2BQ9ULI0 1458 aa21.2■□□□□ 0.98
CTSB-214ENST00000527243 MROH2BQ7Z745 1585 aa21.15■□□□□ 0.98
CTSB-214ENST00000527243 SMARCA2P51531 1590 aa21.13■□□□□ 0.97
CTSB-214ENST00000527243 PEG3Q9GZU2 1588 aa21.12■□□□□ 0.97
CTSB-214ENST00000527243 HMGXB3Q12766 1538 aa21.08■□□□□ 0.96
CTSB-214ENST00000527243 BAZ1BQ9UIG0 1483 aaKnown RBP20.97■□□□□ 0.95
CTSB-214ENST00000527243 RSF1Q96T23 1441 aaPredicted RBP20.92■□□□□ 0.94
CTSB-214ENST00000527243 WIZO95785 1651 aa20.86■□□□□ 0.93
CTSB-214ENST00000527243 TOP2AP11388 1531 aaKnown RBP20.68■□□□□ 0.9
CTSB-214ENST00000527243 NESP48681 1621 aa20.66■□□□□ 0.9
CTSB-214ENST00000527243 LAMC3Q9Y6N6 1575 aa20.59■□□□□ 0.89
CTSB-214ENST00000527243 CADPSQ9ULU8 1353 aa20.57■□□□□ 0.88
CTSB-214ENST00000527243 ERCC6Q03468 1493 aa20.52■□□□□ 0.88
CTSB-214ENST00000527243 PDS5BQ9NTI5 1447 aa20.45■□□□□ 0.86
CTSB-214ENST00000527243 CCDC88BA6NC98 1476 aa20.45■□□□□ 0.86
CTSB-214ENST00000527243 CFTRP13569 1480 aa20.45■□□□□ 0.86
CTSB-214ENST00000527243 CUX2O14529 1486 aa20.38■□□□□ 0.85
CTSB-214ENST00000527243 THOC2Q8NI27 1593 aaKnown RBP20.35■□□□□ 0.85
CTSB-214ENST00000527243 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
CTSB-214ENST00000527243 FANCD2Q9BXW9 1451 aa20.3■□□□□ 0.84
CTSB-214ENST00000527243 MRC2Q9UBG0 1479 aa20.26■□□□□ 0.83
CTSB-214ENST00000527243 CEP164Q9UPV0 1460 aa20.26■□□□□ 0.83
CTSB-214ENST00000527243 SUPT5HO00267 1087 aaKnown RBP20.26■□□□□ 0.83
CTSB-214ENST00000527243 WDR62O43379 1518 aa20.21■□□□□ 0.83
CTSB-214ENST00000527243 PRDM2Q13029 1718 aa20.17■□□□□ 0.82
CTSB-214ENST00000527243 URB2Q14146 1524 aaKnown RBP20.13■□□□□ 0.81
CTSB-214ENST00000527243 TOPBP1Q92547 1522 aa19.99■□□□□ 0.79
CTSB-214ENST00000527243 ABCC8Q09428 1581 aa19.96■□□□□ 0.79
CTSB-214ENST00000527243 DNMBPQ6XZF7 1577 aa19.95■□□□□ 0.78
CTSB-214ENST00000527243 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
CTSB-214ENST00000527243 CUX1P39880 1505 aa19.84■□□□□ 0.77
CTSB-214ENST00000527243 POLA1P09884 1462 aaPredicted RBP19.82■□□□□ 0.76
CTSB-214ENST00000527243 DNAJC5Q9H3Z4 198 aa19.81■□□□□ 0.76
CTSB-214ENST00000527243 ZNF608Q9ULD9 1512 aaPredicted RBP19.79■□□□□ 0.76
CTSB-214ENST00000527243 TARBP1Q13395 1621 aaKnown RBP19.77■□□□□ 0.76
CTSB-214ENST00000527243 FGD5Q6ZNL6 1462 aa19.75■□□□□ 0.75
CTSB-214ENST00000527243 RAD54L2Q9Y4B4 1467 aa19.73■□□□□ 0.75
CTSB-214ENST00000527243 SOGA1O94964 1423 aa19.72■□□□□ 0.75
CTSB-214ENST00000527243 WRNQ14191 1432 aaPredicted RBP eCLIP19.68■□□□□ 0.74
CTSB-214ENST00000527243 EIF4G3O43432 1585 aaKnown RBP19.66■□□□□ 0.74
CTSB-214ENST00000527243 AQRO60306 1485 aaKnown RBP eCLIP19.66■□□□□ 0.742e-7■■■■■ 30.6
CTSB-214ENST00000527243 TOP2BQ02880 1626 aa19.64■□□□□ 0.73
CTSB-214ENST00000527243 SYNJ1O43426 1573 aa19.63■□□□□ 0.73
CTSB-214ENST00000527243 BIVM-ERCC5R4GMW8 1640 aa19.62■□□□□ 0.73
CTSB-214ENST00000527243 TDRD9Q8NDG6 1382 aaKnown RBP19.62■□□□□ 0.73
CTSB-214ENST00000527243 WDR97A6NE52 1622 aa19.6■□□□□ 0.73
CTSB-214ENST00000527243 ABCA10Q8WWZ4 1543 aa19.6■□□□□ 0.73
CTSB-214ENST00000527243 OSCARQ8IYS5 282 aa19.51■□□□□ 0.71
CTSB-214ENST00000527243 GRIN2BQ13224 1484 aa19.5■□□□□ 0.71
CTSB-214ENST00000527243 GAPVD1Q14C86 1478 aa19.49■□□□□ 0.71
CTSB-214ENST00000527243 ABCA5Q8WWZ7 1642 aa19.49■□□□□ 0.71
CTSB-214ENST00000527243 SNAPC4Q5SXM2 1469 aa19.47■□□□□ 0.71
CTSB-214ENST00000527243 MAGI1Q96QZ7 1491 aaPredicted RBP19.46■□□□□ 0.71
CTSB-214ENST00000527243 SYNJ2O15056 1496 aa19.38■□□□□ 0.69
CTSB-214ENST00000527243 PBRM1Q86U86 1689 aa19.38■□□□□ 0.69
CTSB-214ENST00000527243 CHD1O14646 1710 aa19.37■□□□□ 0.69
CTSB-214ENST00000527243 FBLN2P98095 1184 aa19.34■□□□□ 0.69
CTSB-214ENST00000527243 ERICH3Q5RHP9 1530 aa19.34■□□□□ 0.69
CTSB-214ENST00000527243 CHMP7Q8WUX9 453 aaPredicted RBP19.33■□□□□ 0.68
CTSB-214ENST00000527243 ADAMTS12P58397 1594 aa19.3■□□□□ 0.68
CTSB-214ENST00000527243 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
CTSB-214ENST00000527243 KIF27Q86VH2 1401 aa19.26■□□□□ 0.67
CTSB-214ENST00000527243 CLASP1Q7Z460 1538 aa19.26■□□□□ 0.67
CTSB-214ENST00000527243 GRIN2AQ12879 1464 aa19.25■□□□□ 0.67
CTSB-214ENST00000527243 IGF1RP08069 1367 aa19.25■□□□□ 0.67
CTSB-214ENST00000527243 NUP160Q12769 1436 aa19.21■□□□□ 0.67
CTSB-214ENST00000527243 ARHGEF11O15085 1522 aa19.2■□□□□ 0.66
CTSB-214ENST00000527243 RIMBP3CA6NJZ7 1639 aa19.18■□□□□ 0.66
CTSB-214ENST00000527243 RIMBP3BA6NNM3 1639 aa19.18■□□□□ 0.66
CTSB-214ENST00000527243 RIMBP3Q9UFD9 1639 aa19.18■□□□□ 0.66
CTSB-214ENST00000527243 CEP170Q5SW79 1584 aa19.15■□□□□ 0.66
CTSB-214ENST00000527243 TRIM41Q8WV44 630 aa19.15■□□□□ 0.66
CTSB-214ENST00000527243 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
CTSB-214ENST00000527243 CUL7Q14999 1698 aa19.11■□□□□ 0.65
CTSB-214ENST00000527243 CARMIL1Q5VZK9 1371 aa19.09■□□□□ 0.65
CTSB-214ENST00000527243 ARAP1Q96P48 1450 aa19.09■□□□□ 0.65
CTSB-214ENST00000527243 SHROOM2Q13796 1616 aa19.03■□□□□ 0.64
CTSB-214ENST00000527243 KIAA0586Q9BVV6 1533 aa19■□□□□ 0.63
CTSB-214ENST00000527243 CYB5RLQ6IPT4 315 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms