RNA–Protein interactions for RNA: ENST00000506188.5

SNHG4-203, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 801 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-203ENST00000506188 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
SNHG4-203ENST00000506188 CCDC180Q9P1Z9 1646 aa30.21■■■□□ 2.43
SNHG4-203ENST00000506188 ABCC9O60706 1549 aa29.93■■■□□ 2.38
SNHG4-203ENST00000506188 DCAF8L2P0C7V8 631 aa28.79■■■□□ 2.2
SNHG4-203ENST00000506188 RB1CC1Q8TDY2 1594 aa28.69■■■□□ 2.18
SNHG4-203ENST00000506188 NACADO15069 1562 aa28.59■■■□□ 2.17
SNHG4-203ENST00000506188 MYO15BQ96JP2 1530 aa28.33■■■□□ 2.13
SNHG4-203ENST00000506188 ZCCHC6Q5VYS8 1495 aaKnown RBP28.2■■■□□ 2.1
SNHG4-203ENST00000506188 DCAF1Q9Y4B6 1507 aa28.09■■■□□ 2.09
SNHG4-203ENST00000506188 PABPN1Q86U42 306 aaKnown RBP eCLIP28.02■■■□□ 2.08
SNHG4-203ENST00000506188 UNC13AQ9UPW8 1703 aa27.68■■■□□ 2.02
SNHG4-203ENST00000506188 DNAJC5BQ9UF47 199 aa27.66■■■□□ 2.02
SNHG4-203ENST00000506188 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
SNHG4-203ENST00000506188 SCRIBQ14160 1630 aa27.58■■■□□ 2.01
SNHG4-203ENST00000506188 SHROOM4Q9ULL8 1493 aa27.54■■■□□ 2
SNHG4-203ENST00000506188 EIF4G1Q04637 1599 aaKnown RBP27.05■■□□□ 1.92
SNHG4-203ENST00000506188 CC2D2AQ9P2K1 1620 aa26.98■■□□□ 1.91
SNHG4-203ENST00000506188 CECR2Q9BXF3 1484 aa26.96■■□□□ 1.91
SNHG4-203ENST00000506188 NCAPD3P42695 1498 aa26.41■■□□□ 1.82
SNHG4-203ENST00000506188 BAZ1AQ9NRL2 1556 aaPredicted RBP26.39■■□□□ 1.82
SNHG4-203ENST00000506188 ATAD2BQ9ULI0 1458 aa26.35■■□□□ 1.81
SNHG4-203ENST00000506188 SMARCA2P51531 1590 aa26.34■■□□□ 1.81
SNHG4-203ENST00000506188 SMARCA4P51532 1647 aa26.34■■□□□ 1.81
SNHG4-203ENST00000506188 HMGXB3Q12766 1538 aa26.19■■□□□ 1.78
SNHG4-203ENST00000506188 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
SNHG4-203ENST00000506188 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
SNHG4-203ENST00000506188 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
SNHG4-203ENST00000506188 ERCC6Q03468 1493 aa25.94■■□□□ 1.74
SNHG4-203ENST00000506188 RSF1Q96T23 1441 aaPredicted RBP25.81■■□□□ 1.72
SNHG4-203ENST00000506188 WIZO95785 1651 aa25.77■■□□□ 1.72
SNHG4-203ENST00000506188 NESP48681 1621 aa25.75■■□□□ 1.71
SNHG4-203ENST00000506188 LAMC3Q9Y6N6 1575 aa25.71■■□□□ 1.71
SNHG4-203ENST00000506188 PDS5BQ9NTI5 1447 aa25.71■■□□□ 1.71
SNHG4-203ENST00000506188 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
SNHG4-203ENST00000506188 CUX2O14529 1486 aa25.67■■□□□ 1.7
SNHG4-203ENST00000506188 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.68
SNHG4-203ENST00000506188 CFTRP13569 1480 aa25.4■■□□□ 1.66
SNHG4-203ENST00000506188 MRC2Q9UBG0 1479 aa25.34■■□□□ 1.65
SNHG4-203ENST00000506188 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
SNHG4-203ENST00000506188 FANCD2Q9BXW9 1451 aa25.34■■□□□ 1.65
SNHG4-203ENST00000506188 THOC2Q8NI27 1593 aaKnown RBP25.32■■□□□ 1.64
SNHG4-203ENST00000506188 CCDC88BA6NC98 1476 aa25.31■■□□□ 1.64
SNHG4-203ENST00000506188 KIF21AQ7Z4S6 1674 aa25.31■■□□□ 1.64
SNHG4-203ENST00000506188 DNAJC5Q9H3Z4 198 aa25.26■■□□□ 1.63
SNHG4-203ENST00000506188 WDR62O43379 1518 aa25.18■■□□□ 1.62
SNHG4-203ENST00000506188 SUPT5HO00267 1087 aaKnown RBP25.16■■□□□ 1.62
SNHG4-203ENST00000506188 URB2Q14146 1524 aaKnown RBP25.01■■□□□ 1.59
SNHG4-203ENST00000506188 ABCC8Q09428 1581 aa24.98■■□□□ 1.59
SNHG4-203ENST00000506188 PRDM2Q13029 1718 aa24.93■■□□□ 1.58
SNHG4-203ENST00000506188 TOPBP1Q92547 1522 aa24.86■■□□□ 1.57
SNHG4-203ENST00000506188 IFT140Q96RY7 1462 aa24.84■■□□□ 1.57
SNHG4-203ENST00000506188 DNMBPQ6XZF7 1577 aa24.79■■□□□ 1.56
SNHG4-203ENST00000506188 OSCARQ8IYS5 282 aa24.74■■□□□ 1.55
SNHG4-203ENST00000506188 SOGA1O94964 1423 aa24.64■■□□□ 1.54
SNHG4-203ENST00000506188 ZNF608Q9ULD9 1512 aaPredicted RBP24.64■■□□□ 1.53
SNHG4-203ENST00000506188 POLA1P09884 1462 aaPredicted RBP24.63■■□□□ 1.53
SNHG4-203ENST00000506188 AQRO60306 1485 aaKnown RBP eCLIP24.55■■□□□ 1.524e-10■■■■■ 32.5
SNHG4-203ENST00000506188 FGD5Q6ZNL6 1462 aa24.54■■□□□ 1.52
SNHG4-203ENST00000506188 RAD54L2Q9Y4B4 1467 aa24.52■■□□□ 1.52
SNHG4-203ENST00000506188 CUX1P39880 1505 aa24.52■■□□□ 1.52
SNHG4-203ENST00000506188 TDRD9Q8NDG6 1382 aaKnown RBP24.52■■□□□ 1.52
SNHG4-203ENST00000506188 TARBP1Q13395 1621 aaKnown RBP24.5■■□□□ 1.51
SNHG4-203ENST00000506188 FBLN2P98095 1184 aa24.5■■□□□ 1.51
SNHG4-203ENST00000506188 EIF4G3O43432 1585 aaKnown RBP24.48■■□□□ 1.51
SNHG4-203ENST00000506188 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
SNHG4-203ENST00000506188 WDR97A6NE52 1622 aa24.39■■□□□ 1.5
SNHG4-203ENST00000506188 CHMP7Q8WUX9 453 aaPredicted RBP24.39■■□□□ 1.49
SNHG4-203ENST00000506188 TRIM41Q8WV44 630 aa24.38■■□□□ 1.49
SNHG4-203ENST00000506188 GRIN2BQ13224 1484 aa24.36■■□□□ 1.49
SNHG4-203ENST00000506188 GAPVD1Q14C86 1478 aa24.31■■□□□ 1.48
SNHG4-203ENST00000506188 ABCA10Q8WWZ4 1543 aa24.3■■□□□ 1.48
SNHG4-203ENST00000506188 SNAPC4Q5SXM2 1469 aa24.29■■□□□ 1.48
SNHG4-203ENST00000506188 MAGI1Q96QZ7 1491 aaPredicted RBP24.29■■□□□ 1.48
SNHG4-203ENST00000506188 TOP2BQ02880 1626 aa24.26■■□□□ 1.47
SNHG4-203ENST00000506188 SYNJ2O15056 1496 aa24.2■■□□□ 1.47
SNHG4-203ENST00000506188 BIVM-ERCC5R4GMW8 1640 aa24.19■■□□□ 1.46
SNHG4-203ENST00000506188 SYNJ1O43426 1573 aa24.18■■□□□ 1.46
SNHG4-203ENST00000506188 CHD1O14646 1710 aa24.14■■□□□ 1.45
SNHG4-203ENST00000506188 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
SNHG4-203ENST00000506188 ABCA5Q8WWZ7 1642 aa24.1■■□□□ 1.45
SNHG4-203ENST00000506188 CYB5RLQ6IPT4 315 aa24.09■■□□□ 1.45
SNHG4-203ENST00000506188 RIMBP3CA6NJZ7 1639 aa24.06■■□□□ 1.44
SNHG4-203ENST00000506188 RIMBP3BA6NNM3 1639 aa24.06■■□□□ 1.44
SNHG4-203ENST00000506188 RIMBP3Q9UFD9 1639 aa24.06■■□□□ 1.44
SNHG4-203ENST00000506188 FHAD1B1AJZ9 1412 aa24.05■■□□□ 1.44
SNHG4-203ENST00000506188 PBRM1Q86U86 1689 aa24.05■■□□□ 1.44
SNHG4-203ENST00000506188 ERICH3Q5RHP9 1530 aa24.02■■□□□ 1.44
SNHG4-203ENST00000506188 KIF27Q86VH2 1401 aa23.99■■□□□ 1.43
SNHG4-203ENST00000506188 GRIN2AQ12879 1464 aa23.99■■□□□ 1.43
SNHG4-203ENST00000506188 CLASP1Q7Z460 1538 aa23.96■■□□□ 1.43
SNHG4-203ENST00000506188 ADAMTS12P58397 1594 aa23.92■■□□□ 1.42
SNHG4-203ENST00000506188 ARAP1Q96P48 1450 aa23.87■■□□□ 1.41
SNHG4-203ENST00000506188 NUP160Q12769 1436 aa23.87■■□□□ 1.41
SNHG4-203ENST00000506188 IGF1RP08069 1367 aa23.86■■□□□ 1.41
SNHG4-203ENST00000506188 JPH4Q96JJ6 628 aa23.79■■□□□ 1.4
SNHG4-203ENST00000506188 TRHP20396 242 aaPredicted RBP23.78■■□□□ 1.4
SNHG4-203ENST00000506188 CEP170Q5SW79 1584 aa23.77■■□□□ 1.4
SNHG4-203ENST00000506188 CARMIL1Q5VZK9 1371 aa23.76■■□□□ 1.39
SNHG4-203ENST00000506188 CUL7Q14999 1698 aa23.7■■□□□ 1.39
SNHG4-203ENST00000506188 PRG4Q92954 1404 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms