RNA–Protein interactions for RNA: ENST00000625990.2

CHD2-206, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 888 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-206ENST00000625990 AEBP2Q6ZN18 517 aaPredicted RBP23.58■■□□□ 1.37
CHD2-206ENST00000625990 CHIC1Q5VXU3 224 aa23.16■■□□□ 1.3
CHD2-206ENST00000625990 NISCHQ9Y2I1 1504 aa22.12■■□□□ 1.13
CHD2-206ENST00000625990 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
CHD2-206ENST00000625990 SENP3Q9H4L4 574 aaPredicted RBP19.97■□□□□ 0.79
CHD2-206ENST00000625990 ABCC9O60706 1549 aa19.81■□□□□ 0.76
CHD2-206ENST00000625990 CCDC180Q9P1Z9 1646 aa19.69■□□□□ 0.74
CHD2-206ENST00000625990 PLPPR3Q6T4P5 718 aa18.86■□□□□ 0.61
CHD2-206ENST00000625990 DCAF8L2P0C7V8 631 aa18.77■□□□□ 0.6
CHD2-206ENST00000625990 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
CHD2-206ENST00000625990 NACADO15069 1562 aa18.59■□□□□ 0.57
CHD2-206ENST00000625990 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
CHD2-206ENST00000625990 FOXD1Q16676 465 aa18.53■□□□□ 0.56
CHD2-206ENST00000625990 PABPN1Q86U42 306 aaKnown RBP eCLIP18.52■□□□□ 0.56
CHD2-206ENST00000625990 UNC13AQ9UPW8 1703 aa18.42■□□□□ 0.54
CHD2-206ENST00000625990 ZCCHC6Q5VYS8 1495 aaKnown RBP18.37■□□□□ 0.53
CHD2-206ENST00000625990 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
CHD2-206ENST00000625990 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
CHD2-206ENST00000625990 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
CHD2-206ENST00000625990 DCAF1Q9Y4B6 1507 aa18.14■□□□□ 0.49
CHD2-206ENST00000625990 PPP6R1Q9UPN7 881 aa17.94■□□□□ 0.46
CHD2-206ENST00000625990 ADRA2BP18089 450 aa17.92■□□□□ 0.46
CHD2-206ENST00000625990 CC2D2AQ9P2K1 1620 aa17.83■□□□□ 0.45
CHD2-206ENST00000625990 EIF4G1Q04637 1599 aaKnown RBP17.8■□□□□ 0.44
CHD2-206ENST00000625990 SHROOM4Q9ULL8 1493 aa17.79■□□□□ 0.44
CHD2-206ENST00000625990 CECR2Q9BXF3 1484 aa17.75■□□□□ 0.43
CHD2-206ENST00000625990 PIAS4Q8N2W9 510 aaPredicted RBP17.5■□□□□ 0.39
CHD2-206ENST00000625990 SMARCA4P51532 1647 aa17.25■□□□□ 0.35
CHD2-206ENST00000625990 ATAD2BQ9ULI0 1458 aa17.23■□□□□ 0.35
CHD2-206ENST00000625990 NCAPD3P42695 1498 aa17.18■□□□□ 0.34
CHD2-206ENST00000625990 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
CHD2-206ENST00000625990 BAZ1AQ9NRL2 1556 aaPredicted RBP17.11■□□□□ 0.33
CHD2-206ENST00000625990 SMARCA2P51531 1590 aa17.1■□□□□ 0.33
CHD2-206ENST00000625990 NESP48681 1621 aa17.09■□□□□ 0.33
CHD2-206ENST00000625990 HMGXB3Q12766 1538 aa17.07■□□□□ 0.32
CHD2-206ENST00000625990 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
CHD2-206ENST00000625990 MSH5O43196 834 aa17.02■□□□□ 0.32
CHD2-206ENST00000625990 ERCC6Q03468 1493 aa17.01■□□□□ 0.31
CHD2-206ENST00000625990 PEG3Q9GZU2 1588 aa16.98■□□□□ 0.31
CHD2-206ENST00000625990 WIZO95785 1651 aa16.96■□□□□ 0.31
CHD2-206ENST00000625990 CUX2O14529 1486 aa16.83■□□□□ 0.28
CHD2-206ENST00000625990 KIF21AQ7Z4S6 1674 aa16.81■□□□□ 0.28
CHD2-206ENST00000625990 THOC2Q8NI27 1593 aaKnown RBP16.79■□□□□ 0.28
CHD2-206ENST00000625990 RSF1Q96T23 1441 aaPredicted RBP16.79■□□□□ 0.28
CHD2-206ENST00000625990 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.28
CHD2-206ENST00000625990 DNAJC5Q9H3Z4 198 aa16.75■□□□□ 0.27
CHD2-206ENST00000625990 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
CHD2-206ENST00000625990 PDS5BQ9NTI5 1447 aa16.67■□□□□ 0.26
CHD2-206ENST00000625990 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
CHD2-206ENST00000625990 PPP4R3CPQ6ZMV5 832 aa16.63■□□□□ 0.25
CHD2-206ENST00000625990 MRC2Q9UBG0 1479 aa16.59■□□□□ 0.25
CHD2-206ENST00000625990 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
CHD2-206ENST00000625990 CFTRP13569 1480 aa16.54■□□□□ 0.24
CHD2-206ENST00000625990 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
CHD2-206ENST00000625990 WDR62O43379 1518 aa16.54■□□□□ 0.24
CHD2-206ENST00000625990 CCDC88BA6NC98 1476 aa16.51■□□□□ 0.23
CHD2-206ENST00000625990 URB2Q14146 1524 aaKnown RBP16.47■□□□□ 0.23
CHD2-206ENST00000625990 KCNA4P22459 653 aa16.43■□□□□ 0.22
CHD2-206ENST00000625990 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
CHD2-206ENST00000625990 PRDM2Q13029 1718 aa16.34■□□□□ 0.21
CHD2-206ENST00000625990 ZNF608Q9ULD9 1512 aaPredicted RBP16.3■□□□□ 0.2
CHD2-206ENST00000625990 TOPBP1Q92547 1522 aa16.27■□□□□ 0.2
CHD2-206ENST00000625990 SUPT5HO00267 1087 aaKnown RBP16.25■□□□□ 0.19
CHD2-206ENST00000625990 TRIM41Q8WV44 630 aa16.23■□□□□ 0.19
CHD2-206ENST00000625990 NCBP3Q53F19 620 aaKnown RBP16.22■□□□□ 0.19
CHD2-206ENST00000625990 MAPK8IP2Q13387 824 aaPredicted RBP16.21■□□□□ 0.19
CHD2-206ENST00000625990 DNMBPQ6XZF7 1577 aa16.19■□□□□ 0.18
CHD2-206ENST00000625990 IFT140Q96RY7 1462 aa16.17■□□□□ 0.18
CHD2-206ENST00000625990 EIF4G3O43432 1585 aaKnown RBP16.15■□□□□ 0.18
CHD2-206ENST00000625990 RAD54L2Q9Y4B4 1467 aa16.15■□□□□ 0.18
CHD2-206ENST00000625990 AQRO60306 1485 aaKnown RBP eCLIP16.14■□□□□ 0.172e-19■■■■□ 20.3
CHD2-206ENST00000625990 CNKSR2Q8WXI2 1034 aa16.13■□□□□ 0.17
CHD2-206ENST00000625990 POLA1P09884 1462 aaPredicted RBP16.12■□□□□ 0.17
CHD2-206ENST00000625990 OSCARQ8IYS5 282 aa16.12■□□□□ 0.17
CHD2-206ENST00000625990 TARBP1Q13395 1621 aaKnown RBP16.12■□□□□ 0.17
CHD2-206ENST00000625990 CUX1P39880 1505 aa16.09■□□□□ 0.17
CHD2-206ENST00000625990 ABCC8Q09428 1581 aa16.06■□□□□ 0.16
CHD2-206ENST00000625990 FGD5Q6ZNL6 1462 aa16.06■□□□□ 0.16
CHD2-206ENST00000625990 TDRD9Q8NDG6 1382 aaKnown RBP16.06■□□□□ 0.16
CHD2-206ENST00000625990 NPM3O75607 178 aaKnown RBP16.03■□□□□ 0.16
CHD2-206ENST00000625990 SOGA1O94964 1423 aa16.02■□□□□ 0.16
CHD2-206ENST00000625990 CHD1O14646 1710 aa16.02■□□□□ 0.15
CHD2-206ENST00000625990 FBLN2P98095 1184 aa16.01■□□□□ 0.15
CHD2-206ENST00000625990 RIMBP3CA6NJZ7 1639 aa15.99■□□□□ 0.15
CHD2-206ENST00000625990 RIMBP3BA6NNM3 1639 aa15.99■□□□□ 0.15
CHD2-206ENST00000625990 RIMBP3Q9UFD9 1639 aa15.99■□□□□ 0.15
CHD2-206ENST00000625990 DMRT2Q9Y5R5 561 aa15.98■□□□□ 0.15
CHD2-206ENST00000625990 SNAPC4Q5SXM2 1469 aa15.96■□□□□ 0.14
CHD2-206ENST00000625990 ARHGEF11O15085 1522 aa15.94■□□□□ 0.14
CHD2-206ENST00000625990 WDR97A6NE52 1622 aa15.9■□□□□ 0.14
CHD2-206ENST00000625990 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
CHD2-206ENST00000625990 CYB5RLQ6IPT4 315 aa15.85■□□□□ 0.13
CHD2-206ENST00000625990 PBRM1Q86U86 1689 aa15.84■□□□□ 0.13
CHD2-206ENST00000625990 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
CHD2-206ENST00000625990 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.12
CHD2-206ENST00000625990 ARAP1Q96P48 1450 aa15.83■□□□□ 0.12
CHD2-206ENST00000625990 CHMP7Q8WUX9 453 aaPredicted RBP15.82■□□□□ 0.12
CHD2-206ENST00000625990 ABCA5Q8WWZ7 1642 aa15.81■□□□□ 0.12
CHD2-206ENST00000625990 ABCA10Q8WWZ4 1543 aa15.8■□□□□ 0.12
CHD2-206ENST00000625990 WRNQ14191 1432 aaPredicted RBP eCLIP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms