RNA–Protein interactions for RNA: ENST00000586271.1

TMC6-206, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 970 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-206ENST00000586271 NISCHQ9Y2I1 1504 aa44.37■■■■■ 4.69
TMC6-206ENST00000586271 ABCC9O60706 1549 aa39.66■■■■□ 3.94
TMC6-206ENST00000586271 CCDC180Q9P1Z9 1646 aa39.62■■■■□ 3.93
TMC6-206ENST00000586271 RB1CC1Q8TDY2 1594 aa37.76■■■■□ 3.64
TMC6-206ENST00000586271 NACADO15069 1562 aa37.53■■■■□ 3.6
TMC6-206ENST00000586271 DCAF8L2P0C7V8 631 aa37.31■■■■□ 3.56
TMC6-206ENST00000586271 DNAJC5BQ9UF47 199 aa37.31■■■■□ 3.56
TMC6-206ENST00000586271 ZCCHC6Q5VYS8 1495 aaKnown RBP37.13■■■■□ 3.54
TMC6-206ENST00000586271 MYO15BQ96JP2 1530 aa37.07■■■■□ 3.53
TMC6-206ENST00000586271 PABPN1Q86U42 306 aaKnown RBP eCLIP36.97■■■■□ 3.511e-10■□□□□ 9.7
TMC6-206ENST00000586271 DCAF1Q9Y4B6 1507 aa36.84■■■■□ 3.49
TMC6-206ENST00000586271 UNC13AQ9UPW8 1703 aa36.79■■■■□ 3.48
TMC6-206ENST00000586271 BICRAQ9NZM4 1560 aa36.66■■■■□ 3.46
TMC6-206ENST00000586271 SHROOM4Q9ULL8 1493 aa36.24■■■■□ 3.39
TMC6-206ENST00000586271 SCRIBQ14160 1630 aa36.07■■■■□ 3.36
TMC6-206ENST00000586271 CC2D2AQ9P2K1 1620 aa35.82■■■■□ 3.32
TMC6-206ENST00000586271 CECR2Q9BXF3 1484 aa35.77■■■■□ 3.32
TMC6-206ENST00000586271 EIF4G1Q04637 1599 aaKnown RBP35.76■■■■□ 3.31
TMC6-206ENST00000586271 NCAPD3P42695 1498 aa34.7■■■■□ 3.15
TMC6-206ENST00000586271 ATAD2BQ9ULI0 1458 aa34.56■■■■□ 3.12
TMC6-206ENST00000586271 SMARCA4P51532 1647 aa34.45■■■■□ 3.11
TMC6-206ENST00000586271 SMARCA2P51531 1590 aa34.43■■■■□ 3.1
TMC6-206ENST00000586271 BAZ1AQ9NRL2 1556 aaPredicted RBP34.39■■■■□ 3.1
TMC6-206ENST00000586271 HMGXB3Q12766 1538 aa34.38■■■■□ 3.09
TMC6-206ENST00000586271 DNAJC5Q9H3Z4 198 aa34.3■■■■□ 3.08
TMC6-206ENST00000586271 CUX2O14529 1486 aa34.25■■■■□ 3.07
TMC6-206ENST00000586271 ERCC6Q03468 1493 aa34.25■■■■□ 3.07
TMC6-206ENST00000586271 BAZ1BQ9UIG0 1483 aaKnown RBP34.18■■■■□ 3.06
TMC6-206ENST00000586271 PEG3Q9GZU2 1588 aa34.18■■■■□ 3.06
TMC6-206ENST00000586271 MROH2BQ7Z745 1585 aa34.14■■■■□ 3.06
TMC6-206ENST00000586271 RSF1Q96T23 1441 aaPredicted RBP34.07■■■■□ 3.04
TMC6-206ENST00000586271 NESP48681 1621 aa34.07■■■■□ 3.04
TMC6-206ENST00000586271 LAMC3Q9Y6N6 1575 aa33.85■■■■□ 3.01
TMC6-206ENST00000586271 WIZO95785 1651 aa33.81■■■■□ 3
TMC6-206ENST00000586271 SUPT5HO00267 1087 aaKnown RBP33.8■■■■□ 3
TMC6-206ENST00000586271 PDS5BQ9NTI5 1447 aa33.7■■■□□ 2.99
TMC6-206ENST00000586271 THOC2Q8NI27 1593 aaKnown RBP33.7■■■□□ 2.99
TMC6-206ENST00000586271 CADPSQ9ULU8 1353 aa33.64■■■□□ 2.98
TMC6-206ENST00000586271 TOP2AP11388 1531 aaKnown RBP33.59■■■□□ 2.97
TMC6-206ENST00000586271 KIF21AQ7Z4S6 1674 aa33.55■■■□□ 2.96
TMC6-206ENST00000586271 MRC2Q9UBG0 1479 aa33.37■■■□□ 2.93
TMC6-206ENST00000586271 WDR62O43379 1518 aa33.28■■■□□ 2.92
TMC6-206ENST00000586271 CFTRP13569 1480 aa33.24■■■□□ 2.91
TMC6-206ENST00000586271 CEP164Q9UPV0 1460 aa33.23■■■□□ 2.91
TMC6-206ENST00000586271 FANCD2Q9BXW9 1451 aa33.21■■■□□ 2.91
TMC6-206ENST00000586271 CCDC88BA6NC98 1476 aa33.14■■■□□ 2.9
TMC6-206ENST00000586271 URB2Q14146 1524 aaKnown RBP32.92■■■□□ 2.86
TMC6-206ENST00000586271 PRDM2Q13029 1718 aa32.74■■■□□ 2.83
TMC6-206ENST00000586271 OSCARQ8IYS5 282 aa32.72■■■□□ 2.83
TMC6-206ENST00000586271 TRIM41Q8WV44 630 aa32.69■■■□□ 2.82
TMC6-206ENST00000586271 IFT140Q96RY7 1462 aa32.6■■■□□ 2.81
TMC6-206ENST00000586271 TOPBP1Q92547 1522 aa32.56■■■□□ 2.8
TMC6-206ENST00000586271 ABCC8Q09428 1581 aa32.54■■■□□ 2.8
TMC6-206ENST00000586271 ZNF608Q9ULD9 1512 aaPredicted RBP32.51■■■□□ 2.8
TMC6-206ENST00000586271 DNMBPQ6XZF7 1577 aa32.43■■■□□ 2.78
TMC6-206ENST00000586271 EIF4G3O43432 1585 aaKnown RBP32.28■■■□□ 2.76
TMC6-206ENST00000586271 TARBP1Q13395 1621 aaKnown RBP32.26■■■□□ 2.76
TMC6-206ENST00000586271 POLA1P09884 1462 aaPredicted RBP32.24■■■□□ 2.75
TMC6-206ENST00000586271 AQRO60306 1485 aaKnown RBP eCLIP32.23■■■□□ 2.751e-14■■■■■ 27.6
TMC6-206ENST00000586271 RIMBP3CA6NJZ7 1639 aa32.18■■■□□ 2.74
TMC6-206ENST00000586271 RIMBP3BA6NNM3 1639 aa32.18■■■□□ 2.74
TMC6-206ENST00000586271 RIMBP3Q9UFD9 1639 aa32.18■■■□□ 2.74
TMC6-206ENST00000586271 WRNQ14191 1432 aaPredicted RBP eCLIP32.16■■■□□ 2.74
TMC6-206ENST00000586271 ARHGEF11O15085 1522 aa32.12■■■□□ 2.73
TMC6-206ENST00000586271 SOGA1O94964 1423 aa32.12■■■□□ 2.73
TMC6-206ENST00000586271 RAD54L2Q9Y4B4 1467 aa32.11■■■□□ 2.73
TMC6-206ENST00000586271 TDRD9Q8NDG6 1382 aaKnown RBP32.06■■■□□ 2.72
TMC6-206ENST00000586271 CHIC1Q5VXU3 224 aa32.03■■■□□ 2.72
TMC6-206ENST00000586271 FBLN2P98095 1184 aa32.02■■■□□ 2.72
TMC6-206ENST00000586271 FGD5Q6ZNL6 1462 aa32.02■■■□□ 2.72
TMC6-206ENST00000586271 TOP2BQ02880 1626 aa32■■■□□ 2.71
TMC6-206ENST00000586271 CHD1O14646 1710 aa32■■■□□ 2.71
TMC6-206ENST00000586271 CUX1P39880 1505 aa32■■■□□ 2.71
TMC6-206ENST00000586271 BIVM-ERCC5R4GMW8 1640 aa31.99■■■□□ 2.71
TMC6-206ENST00000586271 SYNJ1O43426 1573 aa31.96■■■□□ 2.71
TMC6-206ENST00000586271 WDR97A6NE52 1622 aa31.96■■■□□ 2.71
TMC6-206ENST00000586271 CYB5RLQ6IPT4 315 aa31.92■■■□□ 2.7
TMC6-206ENST00000586271 SNAPC4Q5SXM2 1469 aa31.88■■■□□ 2.69
TMC6-206ENST00000586271 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
TMC6-206ENST00000586271 MAGI1Q96QZ7 1491 aaPredicted RBP31.84■■■□□ 2.69
TMC6-206ENST00000586271 CHMP7Q8WUX9 453 aaPredicted RBP31.82■■■□□ 2.68
TMC6-206ENST00000586271 ARAP1Q96P48 1450 aa31.81■■■□□ 2.68
TMC6-206ENST00000586271 CLASP1Q7Z460 1538 aa31.73■■■□□ 2.67
TMC6-206ENST00000586271 SYNJ2O15056 1496 aa31.72■■■□□ 2.67
TMC6-206ENST00000586271 GAPVD1Q14C86 1478 aa31.72■■■□□ 2.67
TMC6-206ENST00000586271 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.66
TMC6-206ENST00000586271 PBRM1Q86U86 1689 aa31.58■■■□□ 2.65
TMC6-206ENST00000586271 ABCA5Q8WWZ7 1642 aa31.58■■■□□ 2.65
TMC6-206ENST00000586271 TRHP20396 242 aaPredicted RBP31.55■■■□□ 2.64
TMC6-206ENST00000586271 EEA1Q15075 1411 aa31.48■■■□□ 2.63
TMC6-206ENST00000586271 KIF27Q86VH2 1401 aa31.47■■■□□ 2.63
TMC6-206ENST00000586271 GRIN2AQ12879 1464 aa31.4■■■□□ 2.62
TMC6-206ENST00000586271 ADAMTS12P58397 1594 aa31.34■■■□□ 2.61
TMC6-206ENST00000586271 FHAD1B1AJZ9 1412 aa31.33■■■□□ 2.61
TMC6-206ENST00000586271 NUP160Q12769 1436 aa31.33■■■□□ 2.61
TMC6-206ENST00000586271 ERICH3Q5RHP9 1530 aa31.29■■■□□ 2.6
TMC6-206ENST00000586271 CEP170Q5SW79 1584 aa31.26■■■□□ 2.59
TMC6-206ENST00000586271 RUSC2Q8N2Y8 1516 aa31.24■■■□□ 2.59
TMC6-206ENST00000586271 CSRNP3Q8WYN3 585 aa31.21■■■□□ 2.59
TMC6-206ENST00000586271 ERCC6L2Q5T890 1561 aa31.2■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms