RNA–Protein interactions for RNA: ENST00000564492.1

LINC00261-202, long intergenic non-protein coding RNA 261, humanhuman

TSL 3 BASIC

Gene LINC00261, Length 4,912 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00261-202ENST00000564492 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.2
LINC00261-202ENST00000564492 DCAF8L2P0C7V8 631 aa13.81□□□□□ -0.2
LINC00261-202ENST00000564492 NISCHQ9Y2I1 1504 aa13.8□□□□□ -0.2
LINC00261-202ENST00000564492 MYT1Q01538 1121 aa13.65□□□□□ -0.22
LINC00261-202ENST00000564492 SHROOM4Q9ULL8 1493 aa12.93□□□□□ -0.34
LINC00261-202ENST00000564492 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
LINC00261-202ENST00000564492 HRCP23327 699 aa12.87□□□□□ -0.35
LINC00261-202ENST00000564492 TTBK1Q5TCY1 1321 aaPredicted RBP12.8□□□□□ -0.36
LINC00261-202ENST00000564492 PCGF6Q9BYE7 350 aa12.63□□□□□ -0.39
LINC00261-202ENST00000564492 PPARGC1BQ86YN6 1023 aaKnown RBP12.58□□□□□ -0.4
LINC00261-202ENST00000564492 CENPBP07199 599 aaPredicted RBP12.46□□□□□ -0.42
LINC00261-202ENST00000564492 ERICH6Q7L0X2 663 aa12.44□□□□□ -0.42
LINC00261-202ENST00000564492 SCAF1Q9H7N4 1312 aaKnown RBP12.41□□□□□ -0.42
LINC00261-202ENST00000564492 EHMT2Q96KQ7 1210 aa12.4□□□□□ -0.42
LINC00261-202ENST00000564492 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
LINC00261-202ENST00000564492 BCL11AQ9H165 835 aa12.25□□□□□ -0.45
LINC00261-202ENST00000564492 GTF3C3Q9Y5Q9 886 aa12.22□□□□□ -0.45
LINC00261-202ENST00000564492 ACIN1Q9UKV3 1341 aaKnown RBP12.16□□□□□ -0.46
LINC00261-202ENST00000564492 FAM9AQ8IZU1 332 aaPredicted RBP12.13□□□□□ -0.47
LINC00261-202ENST00000564492 ABCC9O60706 1549 aa12.1□□□□□ -0.47
LINC00261-202ENST00000564492 PRKCSHP14314 528 aaPredicted RBP12.09□□□□□ -0.47
LINC00261-202ENST00000564492 CCDC180Q9P1Z9 1646 aa12.04□□□□□ -0.48
LINC00261-202ENST00000564492 YTHDC1Q96MU7 727 aaKnown RBP11.99□□□□□ -0.49
LINC00261-202ENST00000564492 NEUROD1Q13562 356 aa11.97□□□□□ -0.49
LINC00261-202ENST00000564492 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
LINC00261-202ENST00000564492 TRIM26Q12899 539 aaPredicted RBP11.96□□□□□ -0.5
LINC00261-202ENST00000564492 RANGAP1P46060 587 aaPredicted RBP11.91□□□□□ -0.5
LINC00261-202ENST00000564492 ANP32EQ9BTT0 268 aa11.9□□□□□ -0.5
LINC00261-202ENST00000564492 TRIM41Q8WV44 630 aa11.85□□□□□ -0.51
LINC00261-202ENST00000564492 DIEXFQ68CQ4 756 aaKnown RBP11.8□□□□□ -0.52
LINC00261-202ENST00000564492 CCER1Q8TC90 406 aaPredicted RBP11.76□□□□□ -0.53
LINC00261-202ENST00000564492 APLP2Q06481 763 aa11.68□□□□□ -0.54
LINC00261-202ENST00000564492 UBTFP17480 764 aaKnown RBP11.66□□□□□ -0.54
LINC00261-202ENST00000564492 CSRNP3Q8WYN3 585 aa11.65□□□□□ -0.54
LINC00261-202ENST00000564492 ATP1B4Q9UN42 357 aaPredicted RBP11.65□□□□□ -0.54
LINC00261-202ENST00000564492 RB1CC1Q8TDY2 1594 aa11.61□□□□□ -0.55
LINC00261-202ENST00000564492 SLC24A1O60721 1099 aa11.58□□□□□ -0.56
LINC00261-202ENST00000564492 NEFLP07196 543 aa11.55□□□□□ -0.56
LINC00261-202ENST00000564492 LOC105371045A0A1W2PR82 267 aa11.54□□□□□ -0.56
LINC00261-202ENST00000564492 EIF5BO60841 1220 aaKnown RBP11.53□□□□□ -0.56
LINC00261-202ENST00000564492 CHIC1Q5VXU3 224 aa11.53□□□□□ -0.56
LINC00261-202ENST00000564492 NACADO15069 1562 aa11.52□□□□□ -0.56
LINC00261-202ENST00000564492 MYT1LQ9UL68 1186 aa11.51□□□□□ -0.57
LINC00261-202ENST00000564492 CLSPNQ9HAW4 1339 aa11.48□□□□□ -0.57
LINC00261-202ENST00000564492 DCAF1Q9Y4B6 1507 aa11.47□□□□□ -0.57
LINC00261-202ENST00000564492 ZCCHC6Q5VYS8 1495 aaKnown RBP11.46□□□□□ -0.58
LINC00261-202ENST00000564492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.44□□□□□ -0.58
LINC00261-202ENST00000564492 BCANQ96GW7 911 aa11.44□□□□□ -0.58
LINC00261-202ENST00000564492 RTL5Q5HYW3 569 aaPredicted RBP11.43□□□□□ -0.58
LINC00261-202ENST00000564492 SCRIBQ14160 1630 aa11.38□□□□□ -0.59
LINC00261-202ENST00000564492 GLIPR1L2Q4G1C9 344 aa11.37□□□□□ -0.59
LINC00261-202ENST00000564492 ANO8Q9HCE9 1232 aaPredicted RBP11.37□□□□□ -0.59
LINC00261-202ENST00000564492 ZNF316A6NFI3 1004 aaPredicted RBP11.36□□□□□ -0.59
LINC00261-202ENST00000564492 TSHZ2Q9NRE2 1034 aa11.35□□□□□ -0.59
LINC00261-202ENST00000564492 HNRNPUL2Q1KMD3 747 aaKnown RBP11.32□□□□□ -0.6
LINC00261-202ENST00000564492 CCDC136Q96JN2 1154 aa11.31□□□□□ -0.6
LINC00261-202ENST00000564492 SUPT16HQ9Y5B9 1047 aaKnown RBP11.3□□□□□ -0.6
LINC00261-202ENST00000564492 MYO15BQ96JP2 1530 aa11.29□□□□□ -0.6
LINC00261-202ENST00000564492 DEKP35659 375 aaKnown RBP11.29□□□□□ -0.6
LINC00261-202ENST00000564492 ITGAEP38570 1179 aa11.27□□□□□ -0.61
LINC00261-202ENST00000564492 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.25□□□□□ -0.61
LINC00261-202ENST00000564492 FBLN2P98095 1184 aa11.25□□□□□ -0.61
LINC00261-202ENST00000564492 CDK11AQ9UQ88 783 aaPredicted RBP11.24□□□□□ -0.61
LINC00261-202ENST00000564492 ERICH6BQ5W0A0 696 aa11.23□□□□□ -0.61
LINC00261-202ENST00000564492 MIER1Q8N108 512 aa11.23□□□□□ -0.61
LINC00261-202ENST00000564492 RTN4Q9NQC3 1192 aaKnown RBP11.23□□□□□ -0.61
LINC00261-202ENST00000564492 NBR1Q14596 966 aa11.22□□□□□ -0.61
LINC00261-202ENST00000564492 FKBP8Q14318 412 aa11.2□□□□□ -0.62
LINC00261-202ENST00000564492 PKNOX2Q96KN3 472 aa11.2□□□□□ -0.62
LINC00261-202ENST00000564492 UBE2Q2Q8WVN8 375 aa11.19□□□□□ -0.62
LINC00261-202ENST00000564492 PODXL2Q9NZ53 605 aa11.18□□□□□ -0.62
LINC00261-202ENST00000564492 RBM19Q9Y4C8 960 aaKnown RBP11.18□□□□□ -0.62
LINC00261-202ENST00000564492 SALL2Q9Y467 1007 aaPredicted RBP11.17□□□□□ -0.62
LINC00261-202ENST00000564492 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
LINC00261-202ENST00000564492 P3H3Q8IVL6 736 aa11.12□□□□□ -0.63
LINC00261-202ENST00000564492 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
LINC00261-202ENST00000564492 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
LINC00261-202ENST00000564492 ANP32AP39687 249 aaKnown RBP11.01□□□□□ -0.65
LINC00261-202ENST00000564492 CECR2Q9BXF3 1484 aa11.01□□□□□ -0.65
LINC00261-202ENST00000564492 PLEKHG5O94827 1062 aa10.97□□□□□ -0.65
LINC00261-202ENST00000564492 FAM50AQ14320 339 aaKnown RBP10.97□□□□□ -0.65
LINC00261-202ENST00000564492 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
LINC00261-202ENST00000564492 NOP58Q9Y2X3 529 aaKnown RBP10.95□□□□□ -0.66
LINC00261-202ENST00000564492 ZBTB47Q9UFB7 747 aaPredicted RBP10.94□□□□□ -0.66
LINC00261-202ENST00000564492 A0A0U1RQG5 324 aaPredicted RBP10.89□□□□□ -0.67
LINC00261-202ENST00000564492 FANCIQ9NVI1 1328 aa10.88□□□□□ -0.67
LINC00261-202ENST00000564492 NEFMP07197 916 aa10.88□□□□□ -0.67
LINC00261-202ENST00000564492 CNGB1Q14028 1251 aaPredicted RBP10.88□□□□□ -0.67
LINC00261-202ENST00000564492 BAZ1AQ9NRL2 1556 aaPredicted RBP10.87□□□□□ -0.67
LINC00261-202ENST00000564492 IL27Q8NEV9 243 aa10.87□□□□□ -0.67
LINC00261-202ENST00000564492 POLR3GLQ9BT43 218 aa10.86□□□□□ -0.67
LINC00261-202ENST00000564492 TIMELESSQ9UNS1 1208 aa10.86□□□□□ -0.67
LINC00261-202ENST00000564492 BAZ1BQ9UIG0 1483 aaKnown RBP10.86□□□□□ -0.67
LINC00261-202ENST00000564492 RSPH6AQ9H0K4 717 aa10.86□□□□□ -0.67
LINC00261-202ENST00000564492 SMARCA2P51531 1590 aa10.82□□□□□ -0.68
LINC00261-202ENST00000564492 NPM2Q86SE8 214 aaKnown RBP10.81□□□□□ -0.68
LINC00261-202ENST00000564492 TRIM52Q96A61 297 aa10.81□□□□□ -0.68
LINC00261-202ENST00000564492 ZNF777Q9ULD5 760 aaPredicted RBP10.81□□□□□ -0.68
LINC00261-202ENST00000564492 MSH5O43196 834 aa10.81□□□□□ -0.68
LINC00261-202ENST00000564492 CHMP7Q8WUX9 453 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms