RNA–Protein interactions for RNA: ENST00000566209.1

SH2B1-211, Transcript of SH2B adaptor protein 1, humanhuman

TSL 4

Gene SH2B1, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-211ENST00000566209 NISCHQ9Y2I1 1504 aa31.65■■■□□ 2.66
SH2B1-211ENST00000566209 CCDC180Q9P1Z9 1646 aa28.08■■■□□ 2.09
SH2B1-211ENST00000566209 ABCC9O60706 1549 aa27.77■■■□□ 2.04
SH2B1-211ENST00000566209 DCAF8L2P0C7V8 631 aa26.52■■□□□ 1.84
SH2B1-211ENST00000566209 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
SH2B1-211ENST00000566209 NACADO15069 1562 aa26.43■■□□□ 1.82
SH2B1-211ENST00000566209 ZCCHC6Q5VYS8 1495 aaKnown RBP26.33■■□□□ 1.81
SH2B1-211ENST00000566209 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
SH2B1-211ENST00000566209 UNC13AQ9UPW8 1703 aa26.08■■□□□ 1.76
SH2B1-211ENST00000566209 DCAF1Q9Y4B6 1507 aa26.07■■□□□ 1.76
SH2B1-211ENST00000566209 PABPN1Q86U42 306 aaKnown RBP eCLIP25.99■■□□□ 1.75
SH2B1-211ENST00000566209 BICRAQ9NZM4 1560 aa25.89■■□□□ 1.73
SH2B1-211ENST00000566209 DNAJC5BQ9UF47 199 aa25.78■■□□□ 1.72
SH2B1-211ENST00000566209 SCRIBQ14160 1630 aa25.77■■□□□ 1.72
SH2B1-211ENST00000566209 SHROOM4Q9ULL8 1493 aa25.29■■□□□ 1.64
SH2B1-211ENST00000566209 EIF4G1Q04637 1599 aaKnown RBP25.13■■□□□ 1.61
SH2B1-211ENST00000566209 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.61
SH2B1-211ENST00000566209 CECR2Q9BXF3 1484 aa24.9■■□□□ 1.58
SH2B1-211ENST00000566209 SMARCA4P51532 1647 aa24.58■■□□□ 1.53
SH2B1-211ENST00000566209 ATAD2BQ9ULI0 1458 aa24.5■■□□□ 1.51
SH2B1-211ENST00000566209 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
SH2B1-211ENST00000566209 BAZ1AQ9NRL2 1556 aaPredicted RBP24.46■■□□□ 1.51
SH2B1-211ENST00000566209 NCAPD3P42695 1498 aa24.45■■□□□ 1.5
SH2B1-211ENST00000566209 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
SH2B1-211ENST00000566209 PEG3Q9GZU2 1588 aa24.29■■□□□ 1.48
SH2B1-211ENST00000566209 HMGXB3Q12766 1538 aa24.27■■□□□ 1.48
SH2B1-211ENST00000566209 BAZ1BQ9UIG0 1483 aaKnown RBP24.22■■□□□ 1.47
SH2B1-211ENST00000566209 WIZO95785 1651 aa24.21■■□□□ 1.47
SH2B1-211ENST00000566209 RSF1Q96T23 1441 aaPredicted RBP24.11■■□□□ 1.45
SH2B1-211ENST00000566209 NESP48681 1621 aa24.06■■□□□ 1.44
SH2B1-211ENST00000566209 TOP2AP11388 1531 aaKnown RBP23.83■■□□□ 1.41
SH2B1-211ENST00000566209 ERCC6Q03468 1493 aa23.81■■□□□ 1.4
SH2B1-211ENST00000566209 LAMC3Q9Y6N6 1575 aa23.77■■□□□ 1.4
SH2B1-211ENST00000566209 CADPSQ9ULU8 1353 aa23.73■■□□□ 1.39
SH2B1-211ENST00000566209 KIF21AQ7Z4S6 1674 aa23.7■■□□□ 1.39
SH2B1-211ENST00000566209 THOC2Q8NI27 1593 aaKnown RBP23.64■■□□□ 1.37
SH2B1-211ENST00000566209 CCDC88BA6NC98 1476 aa23.62■■□□□ 1.37
SH2B1-211ENST00000566209 PDS5BQ9NTI5 1447 aa23.59■■□□□ 1.37
SH2B1-211ENST00000566209 CUX2O14529 1486 aa23.57■■□□□ 1.36
SH2B1-211ENST00000566209 CFTRP13569 1480 aa23.57■■□□□ 1.36
SH2B1-211ENST00000566209 FANCD2Q9BXW9 1451 aa23.48■■□□□ 1.35
SH2B1-211ENST00000566209 MRC2Q9UBG0 1479 aa23.43■■□□□ 1.34
SH2B1-211ENST00000566209 SUPT5HO00267 1087 aaKnown RBP23.42■■□□□ 1.34
SH2B1-211ENST00000566209 CEP164Q9UPV0 1460 aa23.41■■□□□ 1.34
SH2B1-211ENST00000566209 WDR62O43379 1518 aa23.38■■□□□ 1.33
SH2B1-211ENST00000566209 URB2Q14146 1524 aaKnown RBP23.33■■□□□ 1.33
SH2B1-211ENST00000566209 PRDM2Q13029 1718 aa23.33■■□□□ 1.33
SH2B1-211ENST00000566209 TOPBP1Q92547 1522 aa23.12■■□□□ 1.29
SH2B1-211ENST00000566209 DNAJC5Q9H3Z4 198 aa23.11■■□□□ 1.29
SH2B1-211ENST00000566209 DNMBPQ6XZF7 1577 aa23.02■■□□□ 1.28
SH2B1-211ENST00000566209 ZNF608Q9ULD9 1512 aaPredicted RBP23■■□□□ 1.27
SH2B1-211ENST00000566209 CUX1P39880 1505 aa22.95■■□□□ 1.26
SH2B1-211ENST00000566209 ABCC8Q09428 1581 aa22.92■■□□□ 1.26
SH2B1-211ENST00000566209 POLA1P09884 1462 aaPredicted RBP22.92■■□□□ 1.26
SH2B1-211ENST00000566209 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
SH2B1-211ENST00000566209 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
SH2B1-211ENST00000566209 TARBP1Q13395 1621 aaKnown RBP22.9■■□□□ 1.26
SH2B1-211ENST00000566209 FGD5Q6ZNL6 1462 aa22.85■■□□□ 1.25
SH2B1-211ENST00000566209 AQRO60306 1485 aaKnown RBP eCLIP22.82■■□□□ 1.241e-8■■□□□ 13
SH2B1-211ENST00000566209 EIF4G3O43432 1585 aaKnown RBP22.81■■□□□ 1.24
SH2B1-211ENST00000566209 SOGA1O94964 1423 aa22.78■■□□□ 1.24
SH2B1-211ENST00000566209 TDRD9Q8NDG6 1382 aaKnown RBP22.75■■□□□ 1.23
SH2B1-211ENST00000566209 SYNJ1O43426 1573 aa22.72■■□□□ 1.23
SH2B1-211ENST00000566209 WDR97A6NE52 1622 aa22.67■■□□□ 1.22
SH2B1-211ENST00000566209 WRNQ14191 1432 aaPredicted RBP eCLIP22.65■■□□□ 1.22
SH2B1-211ENST00000566209 BIVM-ERCC5R4GMW8 1640 aa22.64■■□□□ 1.21
SH2B1-211ENST00000566209 TOP2BQ02880 1626 aa22.63■■□□□ 1.21
SH2B1-211ENST00000566209 OSCARQ8IYS5 282 aa22.61■■□□□ 1.21
SH2B1-211ENST00000566209 CHD1O14646 1710 aa22.57■■□□□ 1.2
SH2B1-211ENST00000566209 ABCA10Q8WWZ4 1543 aa22.57■■□□□ 1.2
SH2B1-211ENST00000566209 SNAPC4Q5SXM2 1469 aa22.55■■□□□ 1.2
SH2B1-211ENST00000566209 ABCA5Q8WWZ7 1642 aa22.53■■□□□ 1.2
SH2B1-211ENST00000566209 GAPVD1Q14C86 1478 aa22.51■■□□□ 1.19
SH2B1-211ENST00000566209 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
SH2B1-211ENST00000566209 FBLN2P98095 1184 aa22.49■■□□□ 1.19
SH2B1-211ENST00000566209 GRIN2BQ13224 1484 aa22.48■■□□□ 1.19
SH2B1-211ENST00000566209 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
SH2B1-211ENST00000566209 SYNJ2O15056 1496 aa22.36■■□□□ 1.17
SH2B1-211ENST00000566209 RIMBP3CA6NJZ7 1639 aa22.36■■□□□ 1.17
SH2B1-211ENST00000566209 RIMBP3BA6NNM3 1639 aa22.36■■□□□ 1.17
SH2B1-211ENST00000566209 RIMBP3Q9UFD9 1639 aa22.36■■□□□ 1.17
SH2B1-211ENST00000566209 CHMP7Q8WUX9 453 aaPredicted RBP22.35■■□□□ 1.17
SH2B1-211ENST00000566209 TRIM41Q8WV44 630 aa22.34■■□□□ 1.17
SH2B1-211ENST00000566209 ARHGEF11O15085 1522 aa22.31■■□□□ 1.16
SH2B1-211ENST00000566209 ADAMTS12P58397 1594 aa22.31■■□□□ 1.16
SH2B1-211ENST00000566209 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
SH2B1-211ENST00000566209 ERICH3Q5RHP9 1530 aa22.25■■□□□ 1.15
SH2B1-211ENST00000566209 GRIN2AQ12879 1464 aa22.24■■□□□ 1.15
SH2B1-211ENST00000566209 CEP170Q5SW79 1584 aa22.21■■□□□ 1.15
SH2B1-211ENST00000566209 FHAD1B1AJZ9 1412 aa22.21■■□□□ 1.15
SH2B1-211ENST00000566209 IGF1RP08069 1367 aa22.18■■□□□ 1.14
SH2B1-211ENST00000566209 ARAP1Q96P48 1450 aa22.17■■□□□ 1.14
SH2B1-211ENST00000566209 RUSC2Q8N2Y8 1516 aa22.16■■□□□ 1.14
SH2B1-211ENST00000566209 NUP160Q12769 1436 aa22.15■■□□□ 1.14
SH2B1-211ENST00000566209 KIF27Q86VH2 1401 aa22.14■■□□□ 1.13
SH2B1-211ENST00000566209 ERCC6L2Q5T890 1561 aa22.13■■□□□ 1.13
SH2B1-211ENST00000566209 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
SH2B1-211ENST00000566209 SHROOM2Q13796 1616 aa22.01■■□□□ 1.11
SH2B1-211ENST00000566209 CUL7Q14999 1698 aa22■■□□□ 1.11
SH2B1-211ENST00000566209 CARMIL1Q5VZK9 1371 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms