Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 NUS1P2-201ENST00000417358 873 ntBASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 IGHV3-52-201ENST00000519770 353 ntBASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 TPM1-218ENST00000559281 851 ntTSL 5 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 AC138894.3-201ENST00000603787 634 ntBASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ATPAF1Q5TC12 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 SLC25A1P3-201ENST00000395415 828 ntBASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 ABCD1P5-201ENST00000445663 754 ntBASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 AP000867.4-201ENST00000641616 219 ntBASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ATPAF1Q5TC12 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 AC109462.3-201ENST00000573934 613 ntBASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 LINC01711-201ENST00000598340 967 ntBASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ATPAF1Q5TC12 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms