RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 NISCHQ9Y2I1 1504 aa40.78■■■■■ 4.12
IGHV3-52-201ENST00000519770 CCDC180Q9P1Z9 1646 aa35.9■■■■□ 3.34
IGHV3-52-201ENST00000519770 ABCC9O60706 1549 aa34.44■■■■□ 3.1
IGHV3-52-201ENST00000519770 ZCCHC6Q5VYS8 1495 aaKnown RBP34.12■■■■□ 3.05
IGHV3-52-201ENST00000519770 DCAF8L2P0C7V8 631 aa33.99■■■■□ 3.03
IGHV3-52-201ENST00000519770 DCAF1Q9Y4B6 1507 aa33.77■■■■□ 3
IGHV3-52-201ENST00000519770 NACADO15069 1562 aa33.62■■■□□ 2.97
IGHV3-52-201ENST00000519770 MYO15BQ96JP2 1530 aa33.62■■■□□ 2.97
IGHV3-52-201ENST00000519770 RB1CC1Q8TDY2 1594 aa33.48■■■□□ 2.95
IGHV3-52-201ENST00000519770 SCRIBQ14160 1630 aa32.85■■■□□ 2.85
IGHV3-52-201ENST00000519770 SHROOM4Q9ULL8 1493 aa32.8■■■□□ 2.84
IGHV3-52-201ENST00000519770 UNC13AQ9UPW8 1703 aa32.58■■■□□ 2.81
IGHV3-52-201ENST00000519770 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.77
IGHV3-52-201ENST00000519770 BICRAQ9NZM4 1560 aa32.29■■■□□ 2.76
IGHV3-52-201ENST00000519770 CECR2Q9BXF3 1484 aa31.65■■■□□ 2.66
IGHV3-52-201ENST00000519770 BAZ1AQ9NRL2 1556 aaPredicted RBP31.6■■■□□ 2.65
IGHV3-52-201ENST00000519770 SMARCA4P51532 1647 aa31.47■■■□□ 2.63
IGHV3-52-201ENST00000519770 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
IGHV3-52-201ENST00000519770 MROH2BQ7Z745 1585 aa31.42■■■□□ 2.62
IGHV3-52-201ENST00000519770 RSF1Q96T23 1441 aaPredicted RBP31.37■■■□□ 2.61
IGHV3-52-201ENST00000519770 SUPT5HO00267 1087 aaKnown RBP31.35■■■□□ 2.61
IGHV3-52-201ENST00000519770 SMARCA2P51531 1590 aa31.17■■■□□ 2.58
IGHV3-52-201ENST00000519770 CC2D2AQ9P2K1 1620 aa31.14■■■□□ 2.58
IGHV3-52-201ENST00000519770 WIZO95785 1651 aa31.13■■■□□ 2.57
IGHV3-52-201ENST00000519770 ATAD2BQ9ULI0 1458 aa31.12■■■□□ 2.57
IGHV3-52-201ENST00000519770 PEG3Q9GZU2 1588 aa31.11■■■□□ 2.57
IGHV3-52-201ENST00000519770 NCAPD3P42695 1498 aa30.98■■■□□ 2.55
IGHV3-52-201ENST00000519770 BAZ1BQ9UIG0 1483 aaKnown RBP30.97■■■□□ 2.55
IGHV3-52-201ENST00000519770 HMGXB3Q12766 1538 aa30.89■■■□□ 2.54
IGHV3-52-201ENST00000519770 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
IGHV3-52-201ENST00000519770 DNAJC5BQ9UF47 199 aa30.79■■■□□ 2.52
IGHV3-52-201ENST00000519770 CCDC88BA6NC98 1476 aa30.51■■■□□ 2.48
IGHV3-52-201ENST00000519770 CADPSQ9ULU8 1353 aa30.17■■■□□ 2.42
IGHV3-52-201ENST00000519770 CFTRP13569 1480 aa30.11■■■□□ 2.41
IGHV3-52-201ENST00000519770 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.4
IGHV3-52-201ENST00000519770 NESP48681 1621 aa29.96■■■□□ 2.39
IGHV3-52-201ENST00000519770 PRDM2Q13029 1718 aa29.93■■■□□ 2.38
IGHV3-52-201ENST00000519770 PDS5BQ9NTI5 1447 aa29.91■■■□□ 2.38
IGHV3-52-201ENST00000519770 FANCD2Q9BXW9 1451 aa29.82■■■□□ 2.36
IGHV3-52-201ENST00000519770 CEP164Q9UPV0 1460 aa29.74■■■□□ 2.35
IGHV3-52-201ENST00000519770 ERCC6Q03468 1493 aa29.72■■■□□ 2.35
IGHV3-52-201ENST00000519770 KIF21AQ7Z4S6 1674 aa29.63■■■□□ 2.33
IGHV3-52-201ENST00000519770 CHIC1Q5VXU3 224 aa29.63■■■□□ 2.33
IGHV3-52-201ENST00000519770 WRNQ14191 1432 aaPredicted RBP eCLIP29.62■■■□□ 2.33
IGHV3-52-201ENST00000519770 ABCC8Q09428 1581 aa29.62■■■□□ 2.33
IGHV3-52-201ENST00000519770 TRIM41Q8WV44 630 aa29.6■■■□□ 2.33
IGHV3-52-201ENST00000519770 MRC2Q9UBG0 1479 aa29.5■■■□□ 2.31
IGHV3-52-201ENST00000519770 DNMBPQ6XZF7 1577 aa29.44■■■□□ 2.3
IGHV3-52-201ENST00000519770 CUX1P39880 1505 aa29.44■■■□□ 2.3
IGHV3-52-201ENST00000519770 TOP2BQ02880 1626 aa29.42■■■□□ 2.3
IGHV3-52-201ENST00000519770 SYNJ1O43426 1573 aa29.41■■■□□ 2.3
IGHV3-52-201ENST00000519770 URB2Q14146 1524 aaKnown RBP29.4■■■□□ 2.3
IGHV3-52-201ENST00000519770 TOPBP1Q92547 1522 aa29.4■■■□□ 2.3
IGHV3-52-201ENST00000519770 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
IGHV3-52-201ENST00000519770 WDR62O43379 1518 aa29.32■■■□□ 2.28
IGHV3-52-201ENST00000519770 THOC2Q8NI27 1593 aaKnown RBP29.3■■■□□ 2.28
IGHV3-52-201ENST00000519770 FGD5Q6ZNL6 1462 aa29.26■■■□□ 2.27
IGHV3-52-201ENST00000519770 POLA1P09884 1462 aaPredicted RBP29.19■■■□□ 2.26
IGHV3-52-201ENST00000519770 SOGA1O94964 1423 aa29.17■■■□□ 2.26
IGHV3-52-201ENST00000519770 IFT140Q96RY7 1462 aa29.07■■■□□ 2.24
IGHV3-52-201ENST00000519770 RAD54L2Q9Y4B4 1467 aa29.06■■■□□ 2.24
IGHV3-52-201ENST00000519770 CUX2O14529 1486 aa29.03■■■□□ 2.24
IGHV3-52-201ENST00000519770 ABCA10Q8WWZ4 1543 aa29■■■□□ 2.23
IGHV3-52-201ENST00000519770 KIF27Q86VH2 1401 aa29■■■□□ 2.23
IGHV3-52-201ENST00000519770 EEA1Q15075 1411 aa28.98■■■□□ 2.23
IGHV3-52-201ENST00000519770 TARBP1Q13395 1621 aaKnown RBP28.95■■■□□ 2.23
IGHV3-52-201ENST00000519770 FAM9AQ8IZU1 332 aaPredicted RBP28.95■■■□□ 2.22
IGHV3-52-201ENST00000519770 TDRD9Q8NDG6 1382 aaKnown RBP28.88■■■□□ 2.21
IGHV3-52-201ENST00000519770 WDR97A6NE52 1622 aa28.88■■■□□ 2.21
IGHV3-52-201ENST00000519770 CSRNP3Q8WYN3 585 aa28.83■■■□□ 2.21
IGHV3-52-201ENST00000519770 GAPVD1Q14C86 1478 aa28.83■■■□□ 2.21
IGHV3-52-201ENST00000519770 RUSC2Q8N2Y8 1516 aa28.83■■■□□ 2.21
IGHV3-52-201ENST00000519770 ZNF608Q9ULD9 1512 aaPredicted RBP28.79■■■□□ 2.2
IGHV3-52-201ENST00000519770 AQRO60306 1485 aaKnown RBP eCLIP28.78■■■□□ 2.2
IGHV3-52-201ENST00000519770 ABCA5Q8WWZ7 1642 aa28.77■■■□□ 2.2
IGHV3-52-201ENST00000519770 EIF4G3O43432 1585 aaKnown RBP28.72■■■□□ 2.19
IGHV3-52-201ENST00000519770 GRIN2BQ13224 1484 aa28.72■■■□□ 2.19
IGHV3-52-201ENST00000519770 IGF1RP08069 1367 aa28.7■■■□□ 2.18
IGHV3-52-201ENST00000519770 ERICH3Q5RHP9 1530 aa28.69■■■□□ 2.18
IGHV3-52-201ENST00000519770 PBRM1Q86U86 1689 aa28.65■■■□□ 2.18
IGHV3-52-201ENST00000519770 CARMIL1Q5VZK9 1371 aa28.61■■■□□ 2.17
IGHV3-52-201ENST00000519770 CUL7Q14999 1698 aa28.6■■■□□ 2.17
IGHV3-52-201ENST00000519770 MAGI1Q96QZ7 1491 aaPredicted RBP28.54■■■□□ 2.16
IGHV3-52-201ENST00000519770 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
IGHV3-52-201ENST00000519770 PRXQ9BXM0 1461 aa28.53■■■□□ 2.16
IGHV3-52-201ENST00000519770 FHAD1B1AJZ9 1412 aa28.52■■■□□ 2.16
IGHV3-52-201ENST00000519770 KIF21BO75037 1637 aa28.52■■■□□ 2.16
IGHV3-52-201ENST00000519770 EHMT2Q96KQ7 1210 aa28.52■■■□□ 2.16
IGHV3-52-201ENST00000519770 RAPGEF2Q9Y4G8 1499 aa28.52■■■□□ 2.16
IGHV3-52-201ENST00000519770 GOLGA3Q08378 1498 aa28.49■■■□□ 2.15
IGHV3-52-201ENST00000519770 CHMP7Q8WUX9 453 aaPredicted RBP28.47■■■□□ 2.15
IGHV3-52-201ENST00000519770 ADAMTS12P58397 1594 aa28.46■■■□□ 2.15
IGHV3-52-201ENST00000519770 UBTFP17480 764 aaKnown RBP28.46■■■□□ 2.15
IGHV3-52-201ENST00000519770 FBLN2P98095 1184 aa28.44■■■□□ 2.14
IGHV3-52-201ENST00000519770 LOC105371045A0A1W2PR82 267 aa28.43■■■□□ 2.14
IGHV3-52-201ENST00000519770 SYNJ2O15056 1496 aa28.42■■■□□ 2.14
IGHV3-52-201ENST00000519770 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
IGHV3-52-201ENST00000519770 TNIKQ9UKE5 1360 aa28.26■■■□□ 2.12
IGHV3-52-201ENST00000519770 CHD1O14646 1710 aa28.21■■■□□ 2.11
IGHV3-52-201ENST00000519770 CTTNBP2Q8WZ74 1663 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms