Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 AC022616.7-201ENST00000525383 220 ntBASIC14.71□□□□□ -0.05
CCDC107Q8WV48 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 TMED1-207ENST00000591695 809 ntTSL 5 BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 AC083849.1-201ENST00000615227 514 ntBASIC14.71□□□□□ -0.05
CCDC107Q8WV48 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 LINC00554-201ENST00000564841 3011 ntBASIC14.71□□□□□ -0.05
CCDC107Q8WV48 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CCDC107Q8WV48 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.71□□□□□ -0.06
CCDC107Q8WV48 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
CCDC107Q8WV48 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC107Q8WV48 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC107Q8WV48 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC107Q8WV48 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
CCDC107Q8WV48 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC107Q8WV48 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC107Q8WV48 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CCDC107Q8WV48 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 SPDYE13P-201ENST00000445314 798 ntBASIC14.7□□□□□ -0.06
CCDC107Q8WV48 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 RNF216P1-203ENST00000404404 2427 ntBASIC14.7□□□□□ -0.06
CCDC107Q8WV48 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC107Q8WV48 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC107Q8WV48 RCN1P1-201ENST00000400413 996 ntBASIC14.69□□□□□ -0.06
CCDC107Q8WV48 AL645929.1-201ENST00000420084 975 ntBASIC14.69□□□□□ -0.06
CCDC107Q8WV48 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms