Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
SLC9A3P48764 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.59■□□□□ 0.09
SLC9A3P48764 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.59■□□□□ 0.09
SLC9A3P48764 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
SLC9A3P48764 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.59■□□□□ 0.09
SLC9A3P48764 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SLC9A3P48764 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.09
SLC9A3P48764 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
SLC9A3P48764 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC9A3P48764 ACE-204ENST00000428043 5120 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC9A3P48764 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC9A3P48764 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.58■□□□□ 0.08
SLC9A3P48764 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
SLC9A3P48764 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC9A3P48764 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
SLC9A3P48764 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.58■□□□□ 0.08
SLC9A3P48764 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC9A3P48764 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC9A3P48764 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.58■□□□□ 0.08
SLC9A3P48764 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
SLC9A3P48764 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC15.58■□□□□ 0.08
SLC9A3P48764 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC9A3P48764 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 INTS4P1-201ENST00000438455 1935 ntBASIC15.58■□□□□ 0.08
SLC9A3P48764 AC005052.1-201ENST00000625181 2492 ntBASIC15.58■□□□□ 0.08
SLC9A3P48764 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC9A3P48764 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
SLC9A3P48764 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.58■□□□□ 0.08
SLC9A3P48764 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
SLC9A3P48764 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SLC9A3P48764 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC9A3P48764 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 CYP2T1P-202ENST00000641596 2535 ntBASIC15.57■□□□□ 0.08
SLC9A3P48764 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC9A3P48764 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
SLC9A3P48764 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 KRT17P6-201ENST00000453795 1220 ntBASIC15.57■□□□□ 0.08
SLC9A3P48764 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC9A3P48764 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
SLC9A3P48764 CIB2-208ENST00000560618 804 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 TPSP2-201ENST00000561760 610 ntBASIC15.57■□□□□ 0.08
SLC9A3P48764 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC9A3P48764 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SLC9A3P48764 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC15.57■□□□□ 0.08
SLC9A3P48764 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.57■□□□□ 0.08
SLC9A3P48764 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
SLC9A3P48764 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
SLC9A3P48764 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.57■□□□□ 0.08
SLC9A3P48764 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms