Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.34■□□□□ 0.53
RNF40O75150 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.34■□□□□ 0.53
RNF40O75150 AC011467.2-201ENST00000598425 242 ntBASIC18.34■□□□□ 0.53
RNF40O75150 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
RNF40O75150 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
RNF40O75150 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.34■□□□□ 0.53
RNF40O75150 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RNF40O75150 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF40O75150 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
RNF40O75150 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.34■□□□□ 0.53
RNF40O75150 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RNF40O75150 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RNF40O75150 AC006449.5-201ENST00000610658 2098 ntBASIC18.34■□□□□ 0.53
RNF40O75150 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF40O75150 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RNF40O75150 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
RNF40O75150 AC005915.1-201ENST00000624912 2018 ntBASIC18.33■□□□□ 0.53
RNF40O75150 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RNF40O75150 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF40O75150 AC100803.2-201ENST00000562459 1963 ntBASIC18.33■□□□□ 0.53
RNF40O75150 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RNF40O75150 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF40O75150 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
RNF40O75150 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF40O75150 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF40O75150 AC125634.1-201ENST00000438758 1403 ntBASIC18.33■□□□□ 0.53
RNF40O75150 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF40O75150 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF40O75150 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.33■□□□□ 0.53
RNF40O75150 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC18.33■□□□□ 0.53
RNF40O75150 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RNF40O75150 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF40O75150 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF40O75150 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF40O75150 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF40O75150 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
RNF40O75150 BX842568.4-201ENST00000421222 227 ntBASIC18.33■□□□□ 0.52
RNF40O75150 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF40O75150 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF40O75150 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
RNF40O75150 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF40O75150 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.33■□□□□ 0.52
RNF40O75150 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF40O75150 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF40O75150 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.33■□□□□ 0.52
RNF40O75150 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF40O75150 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF40O75150 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF40O75150 AC092850.2-201ENST00000623821 2697 ntBASIC18.33■□□□□ 0.52
RNF40O75150 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF40O75150 FER1L4-210ENST00000615531 5998 ntBASIC18.33■□□□□ 0.52
RNF40O75150 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF40O75150 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF40O75150 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF40O75150 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF40O75150 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
RNF40O75150 AP005117.1-201ENST00000584346 1413 ntBASIC18.32■□□□□ 0.52
RNF40O75150 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
RNF40O75150 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RNF40O75150 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF40O75150 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF40O75150 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF40O75150 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RNF40O75150 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF40O75150 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
RNF40O75150 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF40O75150 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF40O75150 SART3-203ENST00000546611 1184 ntBASIC18.32■□□□□ 0.52
RNF40O75150 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF40O75150 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF40O75150 AC021087.4-201ENST00000563761 564 ntBASIC18.32■□□□□ 0.52
RNF40O75150 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF40O75150 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.32■□□□□ 0.52
RNF40O75150 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF40O75150 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF40O75150 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF40O75150 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF40O75150 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF40O75150 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF40O75150 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF40O75150 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF40O75150 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF40O75150 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF40O75150 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF40O75150 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF40O75150 AC079328.2-201ENST00000561241 3354 ntBASIC18.31■□□□□ 0.52
RNF40O75150 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF40O75150 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF40O75150 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF40O75150 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms