RNA–Protein interactions for RNA: ENST00000504201.1

NGFR-202, Transcript of nerve growth factor receptor, humanhuman

TSL 2 BASIC

Gene NGFR, Length 1,840 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGFR-202ENST00000504201 NISCHQ9Y2I1 1504 aa39.64■■■■□ 3.94
NGFR-202ENST00000504201 CCDC180Q9P1Z9 1646 aa34.68■■■■□ 3.14
NGFR-202ENST00000504201 ABCC9O60706 1549 aa33.97■■■■□ 3.03
NGFR-202ENST00000504201 ZCCHC6Q5VYS8 1495 aaKnown RBP33.34■■■□□ 2.93
NGFR-202ENST00000504201 DCAF1Q9Y4B6 1507 aa32.8■■■□□ 2.84
NGFR-202ENST00000504201 DCAF8L2P0C7V8 631 aa32.76■■■□□ 2.83
NGFR-202ENST00000504201 RB1CC1Q8TDY2 1594 aa32.59■■■□□ 2.81
NGFR-202ENST00000504201 NACADO15069 1562 aa32.56■■■□□ 2.8
NGFR-202ENST00000504201 SHROOM4Q9ULL8 1493 aa32.39■■■□□ 2.78
NGFR-202ENST00000504201 MYO15BQ96JP2 1530 aa32.37■■■□□ 2.77
NGFR-202ENST00000504201 UNC13AQ9UPW8 1703 aa32.01■■■□□ 2.71
NGFR-202ENST00000504201 SCRIBQ14160 1630 aa31.82■■■□□ 2.68
NGFR-202ENST00000504201 PABPN1Q86U42 306 aaKnown RBP eCLIP31.79■■■□□ 2.68
NGFR-202ENST00000504201 BICRAQ9NZM4 1560 aa31.72■■■□□ 2.67
NGFR-202ENST00000504201 SUPT5HO00267 1087 aaKnown RBP31.24■■■□□ 2.59
NGFR-202ENST00000504201 DNAJC5BQ9UF47 199 aa31.13■■■□□ 2.57
NGFR-202ENST00000504201 EIF4G1Q04637 1599 aaKnown RBP30.83■■■□□ 2.53
NGFR-202ENST00000504201 RSF1Q96T23 1441 aaPredicted RBP30.79■■■□□ 2.52
NGFR-202ENST00000504201 CECR2Q9BXF3 1484 aa30.76■■■□□ 2.52
NGFR-202ENST00000504201 CC2D2AQ9P2K1 1620 aa30.7■■■□□ 2.5
NGFR-202ENST00000504201 BAZ1AQ9NRL2 1556 aaPredicted RBP30.63■■■□□ 2.49
NGFR-202ENST00000504201 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
NGFR-202ENST00000504201 SMARCA4P51532 1647 aa30.47■■■□□ 2.47
NGFR-202ENST00000504201 WIZO95785 1651 aa30.41■■■□□ 2.46
NGFR-202ENST00000504201 ATAD2BQ9ULI0 1458 aa30.16■■■□□ 2.42
NGFR-202ENST00000504201 TOP2AP11388 1531 aaKnown RBP30.1■■■□□ 2.41
NGFR-202ENST00000504201 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
NGFR-202ENST00000504201 NCAPD3P42695 1498 aa30.07■■■□□ 2.4
NGFR-202ENST00000504201 SMARCA2P51531 1590 aa30.06■■■□□ 2.4
NGFR-202ENST00000504201 CHIC1Q5VXU3 224 aa29.99■■■□□ 2.39
NGFR-202ENST00000504201 HMGXB3Q12766 1538 aa29.92■■■□□ 2.38
NGFR-202ENST00000504201 BAZ1BQ9UIG0 1483 aaKnown RBP29.91■■■□□ 2.38
NGFR-202ENST00000504201 CCDC88BA6NC98 1476 aa29.77■■■□□ 2.36
NGFR-202ENST00000504201 NESP48681 1621 aa29.47■■■□□ 2.31
NGFR-202ENST00000504201 TRIM41Q8WV44 630 aa29.39■■■□□ 2.3
NGFR-202ENST00000504201 LAMC3Q9Y6N6 1575 aa29.25■■■□□ 2.27
NGFR-202ENST00000504201 CADPSQ9ULU8 1353 aa29.22■■■□□ 2.27
NGFR-202ENST00000504201 ABCC8Q09428 1581 aa29.19■■■□□ 2.26
NGFR-202ENST00000504201 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
NGFR-202ENST00000504201 KIF21AQ7Z4S6 1674 aa29.09■■■□□ 2.25
NGFR-202ENST00000504201 CFTRP13569 1480 aa29.08■■■□□ 2.25
NGFR-202ENST00000504201 PDS5BQ9NTI5 1447 aa29.02■■■□□ 2.24
NGFR-202ENST00000504201 WRNQ14191 1432 aaPredicted RBP eCLIP28.99■■■□□ 2.23
NGFR-202ENST00000504201 PRDM2Q13029 1718 aa28.97■■■□□ 2.23
NGFR-202ENST00000504201 THOC2Q8NI27 1593 aaKnown RBP28.92■■■□□ 2.22
NGFR-202ENST00000504201 FANCD2Q9BXW9 1451 aa28.92■■■□□ 2.22
NGFR-202ENST00000504201 SYNJ1O43426 1573 aa28.88■■■□□ 2.21
NGFR-202ENST00000504201 CEP164Q9UPV0 1460 aa28.84■■■□□ 2.21
NGFR-202ENST00000504201 LOC105371045A0A1W2PR82 267 aa28.83■■■□□ 2.21
NGFR-202ENST00000504201 FAM9AQ8IZU1 332 aaPredicted RBP28.83■■■□□ 2.21
NGFR-202ENST00000504201 MRC2Q9UBG0 1479 aa28.77■■■□□ 2.2
NGFR-202ENST00000504201 TOP2BQ02880 1626 aa28.77■■■□□ 2.2
NGFR-202ENST00000504201 BIVM-ERCC5R4GMW8 1640 aa28.76■■■□□ 2.19
NGFR-202ENST00000504201 CUX2O14529 1486 aa28.74■■■□□ 2.19
NGFR-202ENST00000504201 EEA1Q15075 1411 aa28.69■■■□□ 2.18
NGFR-202ENST00000504201 WDR62O43379 1518 aa28.68■■■□□ 2.18
NGFR-202ENST00000504201 URB2Q14146 1524 aaKnown RBP28.67■■■□□ 2.18
NGFR-202ENST00000504201 SOGA1O94964 1423 aa28.65■■■□□ 2.18
NGFR-202ENST00000504201 CUX1P39880 1505 aa28.63■■■□□ 2.17
NGFR-202ENST00000504201 RUSC2Q8N2Y8 1516 aa28.53■■■□□ 2.16
NGFR-202ENST00000504201 TOPBP1Q92547 1522 aa28.49■■■□□ 2.15
NGFR-202ENST00000504201 CSRNP3Q8WYN3 585 aa28.47■■■□□ 2.15
NGFR-202ENST00000504201 DNMBPQ6XZF7 1577 aa28.42■■■□□ 2.14
NGFR-202ENST00000504201 EHMT2Q96KQ7 1210 aa28.39■■■□□ 2.14
NGFR-202ENST00000504201 KIF21BO75037 1637 aa28.32■■■□□ 2.12
NGFR-202ENST00000504201 FGD5Q6ZNL6 1462 aa28.29■■■□□ 2.12
NGFR-202ENST00000504201 GOLGA3Q08378 1498 aa28.29■■■□□ 2.12
NGFR-202ENST00000504201 POLA1P09884 1462 aaPredicted RBP28.27■■■□□ 2.12
NGFR-202ENST00000504201 KIF27Q86VH2 1401 aa28.25■■■□□ 2.11
NGFR-202ENST00000504201 TNIKQ9UKE5 1360 aa28.21■■■□□ 2.11
NGFR-202ENST00000504201 ZNF608Q9ULD9 1512 aaPredicted RBP28.21■■■□□ 2.11
NGFR-202ENST00000504201 RAD54L2Q9Y4B4 1467 aa28.2■■■□□ 2.11
NGFR-202ENST00000504201 IFT140Q96RY7 1462 aa28.2■■■□□ 2.1
NGFR-202ENST00000504201 TARBP1Q13395 1621 aaKnown RBP28.18■■■□□ 2.1
NGFR-202ENST00000504201 UBTFP17480 764 aaKnown RBP28.12■■■□□ 2.09
NGFR-202ENST00000504201 ERICH3Q5RHP9 1530 aa28.1■■■□□ 2.09
NGFR-202ENST00000504201 PRXQ9BXM0 1461 aa28.09■■■□□ 2.09
NGFR-202ENST00000504201 RAPGEF2Q9Y4G8 1499 aa28.08■■■□□ 2.08
NGFR-202ENST00000504201 CEP162Q5TB80 1403 aa28.07■■■□□ 2.08
NGFR-202ENST00000504201 ABCA10Q8WWZ4 1543 aa28.06■■■□□ 2.08
NGFR-202ENST00000504201 EIF4G3O43432 1585 aaKnown RBP28.06■■■□□ 2.08
NGFR-202ENST00000504201 AQRO60306 1485 aaKnown RBP eCLIP28.05■■■□□ 2.08
NGFR-202ENST00000504201 TDRD9Q8NDG6 1382 aaKnown RBP28.02■■■□□ 2.08
NGFR-202ENST00000504201 WDR97A6NE52 1622 aa27.99■■■□□ 2.07
NGFR-202ENST00000504201 IGF1RP08069 1367 aa27.96■■■□□ 2.07
NGFR-202ENST00000504201 ABCA5Q8WWZ7 1642 aa27.84■■■□□ 2.05
NGFR-202ENST00000504201 CARMIL1Q5VZK9 1371 aa27.84■■■□□ 2.05
NGFR-202ENST00000504201 CLIP1P30622 1438 aa27.82■■■□□ 2.04
NGFR-202ENST00000504201 CUL7Q14999 1698 aa27.81■■■□□ 2.04
NGFR-202ENST00000504201 GAPVD1Q14C86 1478 aa27.79■■■□□ 2.04
NGFR-202ENST00000504201 DNAJC5Q9H3Z4 198 aa27.77■■■□□ 2.04
NGFR-202ENST00000504201 PBRM1Q86U86 1689 aa27.77■■■□□ 2.04
NGFR-202ENST00000504201 SNAPC4Q5SXM2 1469 aa27.76■■■□□ 2.03
NGFR-202ENST00000504201 GRIN2BQ13224 1484 aa27.74■■■□□ 2.03
NGFR-202ENST00000504201 CHD1O14646 1710 aa27.7■■■□□ 2.02
NGFR-202ENST00000504201 TRIM26Q12899 539 aaPredicted RBP27.68■■■□□ 2.02
NGFR-202ENST00000504201 PCGF6Q9BYE7 350 aa27.68■■■□□ 2.02
NGFR-202ENST00000504201 FBLN2P98095 1184 aa27.67■■■□□ 2.02
NGFR-202ENST00000504201 MAGI1Q96QZ7 1491 aaPredicted RBP27.63■■■□□ 2.01
NGFR-202ENST00000504201 OSCARQ8IYS5 282 aa27.62■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms