Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC13.08□□□□□ -0.321e-16■■□□□ 14.5
RPS3P23396 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.371e-16■■□□□ 14.5
RPS3P23396 BCL2L1-207ENST00000439267 781 ntTSL 211.5□□□□□ -0.571e-16■■□□□ 14.5
RPS3P23396 BCL2L1-204ENST00000420488 820 ntTSL 210.2□□□□□ -0.781e-16■■□□□ 14.5
RPS3P23396 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.243e-10■■□□□ 14.5
RPS3P23396 HK1-205ENST00000436817 1042 ntTSL 513.96□□□□□ -0.172e-6■■□□□ 14.4
RPS3P23396 HK1-212ENST00000480047 575 ntTSL 1 (best)9.5□□□□□ -0.892e-6■■□□□ 14.4
RPS3P23396 HK1-204ENST00000421088 707 ntTSL 57.84□□□□□ -1.152e-6■■□□□ 14.4
RPS3P23396 HK1-213ENST00000483054 592 ntTSL 37.28□□□□□ -1.242e-6■■□□□ 14.4
RPS3P23396 HK1-214ENST00000483077 750 ntTSL 35.81□□□□□ -1.482e-6■■□□□ 14.4
RPS3P23396 HK1-210ENST00000476368 605 ntTSL 35.04□□□□□ -1.62e-6■■□□□ 14.4
RPS3P23396 HK1-207ENST00000450646 739 ntTSL 54.8□□□□□ -1.642e-6■■□□□ 14.4
RPS3P23396 HK1-208ENST00000464803 450 ntTSL 1 (best)1.77□□□□□ -2.132e-6■■□□□ 14.4
RPS3P23396 TM9SF1-207ENST00000528895 961 ntTSL 211.7□□□□□ -0.543e-7■■□□□ 14.4
RPS3P23396 LMNA-211ENST00000470199 551 ntTSL 417.44■□□□□ 0.384e-9■■□□□ 14.4
RPS3P23396 LMNA-219ENST00000502751 570 ntTSL 415.95■□□□□ 0.144e-9■■□□□ 14.4
RPS3P23396 LMNA-210ENST00000469565 591 ntTSL 413.41□□□□□ -0.264e-9■■□□□ 14.4
RPS3P23396 TM9SF4-201ENST00000217315 4032 ntTSL 2 BASIC11.98□□□□□ -0.493e-7■■□□□ 14.4
RPS3P23396 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.443e-7■■□□□ 14.4
RPS3P23396 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.233e-6■■□□□ 14.4
RPS3P23396 RPS5-208ENST00000599909 523 ntTSL 210.66□□□□□ -0.71e-18■■□□□ 14.4
RPS3P23396 FLNA-208ENST00000438732 696 ntTSL 516.82■□□□□ 0.283e-9■■□□□ 14.4
RPS3P23396 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.173e-7■■□□□ 14.4
RPS3P23396 FLNA-206ENST00000420627 8225 ntTSL 512.75□□□□□ -0.373e-7■■□□□ 14.4
RPS3P23396 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.373e-7■■□□□ 14.4
RPS3P23396 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.43e-7■■□□□ 14.4
RPS3P23396 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.493e-7■■□□□ 14.4
RPS3P23396 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.533e-7■■□□□ 14.4
RPS3P23396 FLNA-219ENST00000610817 7595 ntTSL 5 BASIC11.42□□□□□ -0.583e-7■■□□□ 14.4
RPS3P23396 RBM22-204ENST00000520132 2067 ntTSL 29.79□□□□□ -0.844e-6■■□□□ 14.4
RPS3P23396 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.235e-7■■□□□ 14.4
RPS3P23396 EMC1-206ENST00000475079 557 ntTSL 410.12□□□□□ -0.794e-7■■□□□ 14.4
RPS3P23396 ITIH2-203ENST00000429820 767 ntTSL 37.91□□□□□ -1.141e-33■■□□□ 14.4
RPS3P23396 RBM3-206ENST00000485213 947 ntTSL 217.96■□□□□ 0.473e-7■■□□□ 14.4
RPS3P23396 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.647e-7■■□□□ 14.4
RPS3P23396 KPNB1-213ENST00000583013 742 ntTSL 37.88□□□□□ -1.151e-6■■□□□ 14.4
RPS3P23396 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.81■■□□□ 1.565e-7■■□□□ 14.4
RPS3P23396 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.42■■□□□ 1.185e-7■■□□□ 14.4
RPS3P23396 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.995e-7■■□□□ 14.4
RPS3P23396 ACAA1-203ENST00000411549 1944 ntTSL 1 (best)19.8■□□□□ 0.765e-7■■□□□ 14.4
RPS3P23396 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.95■□□□□ 0.625e-7■■□□□ 14.4
RPS3P23396 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.63■□□□□ 0.575e-7■■□□□ 14.4
RPS3P23396 GLG1-205ENST00000561942 674 ntTSL 27.17□□□□□ -1.269e-8■■□□□ 14.4
RPS3P23396 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.088e-7■■□□□ 14.4
RPS3P23396 FLNB-207ENST00000470231 315 ntTSL 1 (best)13.71□□□□□ -0.214e-14■■□□□ 14.4
RPS3P23396 EIF3G-214ENST00000593066 590 ntTSL 512.45□□□□□ -0.424e-8■■□□□ 14.4
RPS3P23396 EIF3G-205ENST00000587993 555 ntTSL 310.7□□□□□ -0.74e-8■■□□□ 14.4
RPS3P23396 EIF3G-215ENST00000593095 636 ntTSL 39.89□□□□□ -0.834e-8■■□□□ 14.4
RPS3P23396 MDK-208ENST00000481047 775 ntTSL 222.39■■□□□ 1.172e-14■■□□□ 14.4
RPS3P23396 MDK-212ENST00000533952 477 ntAPPRIS ALT2 TSL 319.35■□□□□ 0.692e-14■■□□□ 14.4
RPS3P23396 MDK-210ENST00000490240 603 ntTSL 1 (best)17.61■□□□□ 0.412e-14■■□□□ 14.4
RPS3P23396 PKM-218ENST00000567087 550 ntTSL 417.96■□□□□ 0.472e-14■■□□□ 14.4
RPS3P23396 GLUD1-202ENST00000465164 503 ntTSL 25.94□□□□□ -1.462e-10■■□□□ 14.4
RPS3P23396 LGR5-202ENST00000536515 2664 ntTSL 1 (best) BASIC12.8□□□□□ -0.361e-6■■□□□ 14.4
RPS3P23396 FN1-226ENST00000496542 695 ntTSL 212.44□□□□□ -0.425e-67■■□□□ 14.4
RPS3P23396 LGR5-203ENST00000540815 2800 ntTSL 1 (best) BASIC11.16□□□□□ -0.621e-6■■□□□ 14.4
RPS3P23396 RBBP4-219ENST00000531983 473 ntTSL 25.25□□□□□ -1.574e-7■■□□□ 14.4
RPS3P23396 ACTR3-205ENST00000478928 5965 ntTSL 22.72□□□□□ -1.973e-7■■□□□ 14.4
RPS3P23396 RACK1-203ENST00000502844 1460 ntTSL 315.13■□□□□ 0.013e-11■■□□□ 14.4
RPS3P23396 CD320-204ENST00000596246 492 ntTSL 318.24■□□□□ 0.514e-10■■□□□ 14.4
RPS3P23396 EFNA1-204ENST00000474413 1083 ntTSL 317.47■□□□□ 0.391e-7■■□□□ 14.4
RPS3P23396 EFNA1-205ENST00000497282 719 ntTSL 27.88□□□□□ -1.151e-7■■□□□ 14.4
RPS3P23396 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.33□□□□□ -1.567e-7■■□□□ 14.4
RPS3P23396 EIF3E-215ENST00000522445 841 ntTSL 34.61□□□□□ -1.677e-7■■□□□ 14.4
RPS3P23396 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.767e-7■■□□□ 14.4
RPS3P23396 EIF3E-209ENST00000519627 697 ntTSL 22.95□□□□□ -1.947e-7■■□□□ 14.4
RPS3P23396 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.218e-7■■□□□ 14.4
RPS3P23396 DDX17-205ENST00000432525 1354 ntTSL 210.48□□□□□ -0.738e-10■■□□□ 14.4
RPS3P23396 ELAC2-218ENST00000584650 2087 ntTSL 220.71■□□□□ 0.913e-6■■□□□ 14.4
RPS3P23396 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.2■□□□□ 0.343e-6■■□□□ 14.4
RPS3P23396 ELAC2-207ENST00000480891 2737 ntTSL 216.81■□□□□ 0.283e-6■■□□□ 14.4
RPS3P23396 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.48■□□□□ 0.233e-6■■□□□ 14.4
RPS3P23396 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.13e-6■■□□□ 14.4
RPS3P23396 ELAC2-208ENST00000484122 3738 ntTSL 212.86□□□□□ -0.353e-6■■□□□ 14.4
RPS3P23396 ENTPD6-206ENST00000418890 656 ntTSL 317.03■□□□□ 0.324e-7■■□□□ 14.4
RPS3P23396 MFSD12-208ENST00000588918 2040 ntTSL 525.25■■□□□ 1.635e-7■■□□□ 14.4
RPS3P23396 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.65e-7■■□□□ 14.4
RPS3P23396 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC24.87■■□□□ 1.575e-7■■□□□ 14.4
RPS3P23396 FLNA-211ENST00000465144 398 ntTSL 217.87■□□□□ 0.451e-20■■□□□ 14.4
RPS3P23396 KHSRP-202ENST00000594496 999 ntTSL 217.71■□□□□ 0.432e-9■■□□□ 14.4
RPS3P23396 EML2-224ENST00000590580 539 ntTSL 216.21■□□□□ 0.192e-9■■□□□ 14.4
RPS3P23396 KHSRP-203ENST00000594745 379 ntTSL 313.65□□□□□ -0.222e-9■■□□□ 14.4
RPS3P23396 NUP93-205ENST00000563437 762 ntTSL 211.41□□□□□ -0.582e-9■■□□□ 14.4
RPS3P23396 KHSRP-208ENST00000597656 328 ntTSL 58.21□□□□□ -1.12e-9■■□□□ 14.4
RPS3P23396 PRKCSH-219ENST00000593101 578 ntTSL 415.33■□□□□ 0.048e-8■■□□□ 14.4
RPS3P23396 SHMT2-214ENST00000554604 879 ntTSL 511.95□□□□□ -0.56e-7■■□□□ 14.4
RPS3P23396 SHMT2-216ENST00000554975 780 ntTSL 310.81□□□□□ -0.686e-7■■□□□ 14.4
RPS3P23396 SHMT2-215ENST00000554656 817 ntTSL 310.08□□□□□ -0.86e-7■■□□□ 14.4
RPS3P23396 KRT8-204ENST00000546826 1165 ntTSL 517.08■□□□□ 0.325e-7■■□□□ 14.4
RPS3P23396 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.66■□□□□ 0.264e-6■■□□□ 14.4
RPS3P23396 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.84■□□□□ 0.134e-6■■□□□ 14.4
RPS3P23396 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC14.13□□□□□ -0.154e-6■■□□□ 14.4
RPS3P23396 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.664e-6■■□□□ 14.4
RPS3P23396 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.714e-6■■□□□ 14.4
RPS3P23396 EWSR1-215ENST00000469669 2630 ntTSL 216.11■□□□□ 0.171e-10■■□□□ 14.4
RPS3P23396 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.61■□□□□ 0.892e-8■■□□□ 14.3
RPS3P23396 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.182e-8■■□□□ 14.3
RPS3P23396 NELFE-207ENST00000454913 914 ntTSL 514.44□□□□□ -0.13e-7■■□□□ 14.3
RPS3P23396 NELFE-204ENST00000436289 906 ntTSL 514.01□□□□□ -0.173e-7■■□□□ 14.3
RPS3P23396 ZNF24-205ENST00000590140 756 ntTSL 312.65□□□□□ -0.382e-6■■□□□ 14.3
Retrieved 100 of 24,271 protein–RNA pairs in 217.8 ms