RNA–Protein interactions for RNA: ENST00000594496.5

KHSRP-202, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-202ENST00000594496 NISCHQ9Y2I1 1504 aa45.21■■■■■ 4.83
KHSRP-202ENST00000594496 ABCC9O60706 1549 aa41.42■■■■■ 4.22
KHSRP-202ENST00000594496 CCDC180Q9P1Z9 1646 aa40.86■■■■■ 4.13
KHSRP-202ENST00000594496 DNAJC5BQ9UF47 199 aa39.31■■■■□ 3.88
KHSRP-202ENST00000594496 RB1CC1Q8TDY2 1594 aa39.2■■■■□ 3.87
KHSRP-202ENST00000594496 NACADO15069 1562 aa38.78■■■■□ 3.8
KHSRP-202ENST00000594496 PABPN1Q86U42 306 aaKnown RBP eCLIP38.44■■■■□ 3.74
KHSRP-202ENST00000594496 DCAF8L2P0C7V8 631 aa38.4■■■■□ 3.74
KHSRP-202ENST00000594496 UNC13AQ9UPW8 1703 aa38.21■■■■□ 3.71
KHSRP-202ENST00000594496 MYO15BQ96JP2 1530 aa38.07■■■■□ 3.68
KHSRP-202ENST00000594496 BICRAQ9NZM4 1560 aa38.02■■■■□ 3.68
KHSRP-202ENST00000594496 SHROOM4Q9ULL8 1493 aa37.56■■■■□ 3.6
KHSRP-202ENST00000594496 CECR2Q9BXF3 1484 aa37.4■■■■□ 3.58
KHSRP-202ENST00000594496 CC2D2AQ9P2K1 1620 aa37.38■■■■□ 3.57
KHSRP-202ENST00000594496 ZCCHC6Q5VYS8 1495 aaKnown RBP37.36■■■■□ 3.57
KHSRP-202ENST00000594496 DCAF1Q9Y4B6 1507 aa37.34■■■■□ 3.57
KHSRP-202ENST00000594496 EIF4G1Q04637 1599 aaKnown RBP37.17■■■■□ 3.54
KHSRP-202ENST00000594496 SCRIBQ14160 1630 aa37.17■■■■□ 3.54
KHSRP-202ENST00000594496 DNAJC5Q9H3Z4 198 aa36.6■■■■□ 3.45
KHSRP-202ENST00000594496 CUX2O14529 1486 aa35.99■■■■□ 3.35
KHSRP-202ENST00000594496 ERCC6Q03468 1493 aa35.86■■■■□ 3.33
KHSRP-202ENST00000594496 NCAPD3P42695 1498 aa35.8■■■■□ 3.32
KHSRP-202ENST00000594496 ATAD2BQ9ULI0 1458 aa35.6■■■■□ 3.29
KHSRP-202ENST00000594496 HMGXB3Q12766 1538 aa35.5■■■■□ 3.27
KHSRP-202ENST00000594496 SMARCA2P51531 1590 aa35.49■■■■□ 3.27
KHSRP-202ENST00000594496 SMARCA4P51532 1647 aa35.4■■■■□ 3.26
KHSRP-202ENST00000594496 NESP48681 1621 aa35.38■■■■□ 3.25
KHSRP-202ENST00000594496 BAZ1BQ9UIG0 1483 aaKnown RBP35.24■■■■□ 3.23
KHSRP-202ENST00000594496 THOC2Q8NI27 1593 aaKnown RBP35.18■■■■□ 3.22
KHSRP-202ENST00000594496 BAZ1AQ9NRL2 1556 aaPredicted RBP35.17■■■■□ 3.22
KHSRP-202ENST00000594496 LAMC3Q9Y6N6 1575 aa35.1■■■■□ 3.21
KHSRP-202ENST00000594496 PEG3Q9GZU2 1588 aa35.08■■■■□ 3.21
KHSRP-202ENST00000594496 PDS5BQ9NTI5 1447 aa34.94■■■■□ 3.18
KHSRP-202ENST00000594496 KIF21AQ7Z4S6 1674 aa34.91■■■■□ 3.18
KHSRP-202ENST00000594496 MROH2BQ7Z745 1585 aa34.81■■■■□ 3.16
KHSRP-202ENST00000594496 TRIM41Q8WV44 630 aa34.76■■■■□ 3.16
KHSRP-202ENST00000594496 CADPSQ9ULU8 1353 aa34.68■■■■□ 3.14
KHSRP-202ENST00000594496 MRC2Q9UBG0 1479 aa34.66■■■■□ 3.14
KHSRP-202ENST00000594496 WDR62O43379 1518 aa34.59■■■■□ 3.13
KHSRP-202ENST00000594496 CEP164Q9UPV0 1460 aa34.4■■■■□ 3.1
KHSRP-202ENST00000594496 WIZO95785 1651 aa34.35■■■■□ 3.09
KHSRP-202ENST00000594496 FANCD2Q9BXW9 1451 aa34.29■■■■□ 3.08
KHSRP-202ENST00000594496 OSCARQ8IYS5 282 aa34.22■■■■□ 3.07
KHSRP-202ENST00000594496 CFTRP13569 1480 aa34.16■■■■□ 3.06
KHSRP-202ENST00000594496 URB2Q14146 1524 aaKnown RBP34.02■■■■□ 3.04
KHSRP-202ENST00000594496 RSF1Q96T23 1441 aaPredicted RBP33.99■■■■□ 3.03
KHSRP-202ENST00000594496 TOP2AP11388 1531 aaKnown RBP33.93■■■■□ 3.02
KHSRP-202ENST00000594496 RIMBP3CA6NJZ7 1639 aa33.82■■■■□ 3.01
KHSRP-202ENST00000594496 RIMBP3BA6NNM3 1639 aa33.82■■■■□ 3.01
KHSRP-202ENST00000594496 RIMBP3Q9UFD9 1639 aa33.82■■■■□ 3.01
KHSRP-202ENST00000594496 PRDM2Q13029 1718 aa33.74■■■□□ 2.99
KHSRP-202ENST00000594496 IFT140Q96RY7 1462 aa33.74■■■□□ 2.99
KHSRP-202ENST00000594496 ZNF608Q9ULD9 1512 aaPredicted RBP33.69■■■□□ 2.98
KHSRP-202ENST00000594496 ARHGEF11O15085 1522 aa33.68■■■□□ 2.98
KHSRP-202ENST00000594496 TOPBP1Q92547 1522 aa33.57■■■□□ 2.96
KHSRP-202ENST00000594496 EIF4G3O43432 1585 aaKnown RBP33.51■■■□□ 2.96
KHSRP-202ENST00000594496 CCDC88BA6NC98 1476 aa33.51■■■□□ 2.96
KHSRP-202ENST00000594496 ABCC8Q09428 1581 aa33.49■■■□□ 2.95
KHSRP-202ENST00000594496 CYB5RLQ6IPT4 315 aa33.44■■■□□ 2.94
KHSRP-202ENST00000594496 DNMBPQ6XZF7 1577 aa33.41■■■□□ 2.94
KHSRP-202ENST00000594496 CHD1O14646 1710 aa33.33■■■□□ 2.93
KHSRP-202ENST00000594496 AQRO60306 1485 aaKnown RBP eCLIP33.31■■■□□ 2.922e-6■□□□□ 10.2
KHSRP-202ENST00000594496 ARAP1Q96P48 1450 aa33.3■■■□□ 2.92
KHSRP-202ENST00000594496 TARBP1Q13395 1621 aaKnown RBP33.29■■■□□ 2.92
KHSRP-202ENST00000594496 TRHP20396 242 aaPredicted RBP33.29■■■□□ 2.92
KHSRP-202ENST00000594496 FBLN2P98095 1184 aa33.23■■■□□ 2.91
KHSRP-202ENST00000594496 POLA1P09884 1462 aaPredicted RBP33.18■■■□□ 2.9
KHSRP-202ENST00000594496 RAD54L2Q9Y4B4 1467 aa33.05■■■□□ 2.88
KHSRP-202ENST00000594496 SOGA1O94964 1423 aa33.02■■■□□ 2.88
KHSRP-202ENST00000594496 TDRD9Q8NDG6 1382 aaKnown RBP33.01■■■□□ 2.88
KHSRP-202ENST00000594496 SNAPC4Q5SXM2 1469 aa32.99■■■□□ 2.87
KHSRP-202ENST00000594496 WDR97A6NE52 1622 aa32.99■■■□□ 2.87
KHSRP-202ENST00000594496 CLASP1Q7Z460 1538 aa32.97■■■□□ 2.87
KHSRP-202ENST00000594496 SYNJ1O43426 1573 aa32.93■■■□□ 2.86
KHSRP-202ENST00000594496 CHMP7Q8WUX9 453 aaPredicted RBP32.91■■■□□ 2.86
KHSRP-202ENST00000594496 MAGI1Q96QZ7 1491 aaPredicted RBP32.9■■■□□ 2.86
KHSRP-202ENST00000594496 FGD5Q6ZNL6 1462 aa32.89■■■□□ 2.86
KHSRP-202ENST00000594496 SUPT5HO00267 1087 aaKnown RBP32.87■■■□□ 2.85
KHSRP-202ENST00000594496 GRIN2BQ13224 1484 aa32.83■■■□□ 2.85
KHSRP-202ENST00000594496 SYNJ2O15056 1496 aa32.8■■■□□ 2.84
KHSRP-202ENST00000594496 AEBP2Q6ZN18 517 aaPredicted RBP32.79■■■□□ 2.84
KHSRP-202ENST00000594496 CUX1P39880 1505 aa32.75■■■□□ 2.83
KHSRP-202ENST00000594496 GAPVD1Q14C86 1478 aa32.67■■■□□ 2.82
KHSRP-202ENST00000594496 PBRM1Q86U86 1689 aa32.62■■■□□ 2.81
KHSRP-202ENST00000594496 ABCA10Q8WWZ4 1543 aa32.5■■■□□ 2.79
KHSRP-202ENST00000594496 ABCA5Q8WWZ7 1642 aa32.49■■■□□ 2.79
KHSRP-202ENST00000594496 GRIN2AQ12879 1464 aa32.4■■■□□ 2.78
KHSRP-202ENST00000594496 ERCC6L2Q5T890 1561 aa32.37■■■□□ 2.77
KHSRP-202ENST00000594496 CEP170Q5SW79 1584 aa32.32■■■□□ 2.76
KHSRP-202ENST00000594496 NUP160Q12769 1436 aa32.31■■■□□ 2.76
KHSRP-202ENST00000594496 ADAMTS12P58397 1594 aa32.31■■■□□ 2.76
KHSRP-202ENST00000594496 WRNQ14191 1432 aaPredicted RBP eCLIP32.26■■■□□ 2.75
KHSRP-202ENST00000594496 SHROOM2Q13796 1616 aa32.22■■■□□ 2.75
KHSRP-202ENST00000594496 FHAD1B1AJZ9 1412 aa32.19■■■□□ 2.74
KHSRP-202ENST00000594496 ERICH3Q5RHP9 1530 aa32.09■■■□□ 2.73
KHSRP-202ENST00000594496 TOP2BQ02880 1626 aa32.08■■■□□ 2.73
KHSRP-202ENST00000594496 BIVM-ERCC5R4GMW8 1640 aa32.08■■■□□ 2.73
KHSRP-202ENST00000594496 KIF13AQ9H1H9 1805 aa32.07■■■□□ 2.73
KHSRP-202ENST00000594496 PRG4Q92954 1404 aaPredicted RBP32.04■■■□□ 2.72
KHSRP-202ENST00000594496 JPH4Q96JJ6 628 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms